Tden013214.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000050.1:427929-429482[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0016 0.32 11.8 0.6 15 44 160 186 153 186 0.86 2 10 0.068 13 6.6 3.6 16 30 189 210 180 218 0.73 3 10 0.044 8.6 7.3 1.1 19 43 220 241 212 242 0.88 4 10 9.6 1.9e+03 -0.2 0.6 19 43 248 269 246 274 0.81 5 10 0.38 75 4.2 3.5 18 40 275 294 263 298 0.77 6 10 0.00033 0.066 14.0 0.6 18 44 303 326 299 326 0.93 7 10 0.035 6.9 7.6 1.4 19 43 360 381 353 382 0.84 8 10 0.00025 0.049 14.4 0.9 18 44 387 410 385 410 0.93 9 10 0.0015 0.3 11.9 4.3 1 44 399 438 399 440 0.90 10 10 0.25 49 4.8 0.8 18 43 443 465 438 466 0.76
Sequence Information
- Coding Sequence
- ATGGAATCCAGAGATGTACTTAATTCTGCTGTCAGGGTAAAAGAGGAGCCTGGTGACGAATCGCTCATTGAAAACGATTACGAAGCAATTGACGAGAAACCCGATCCGAAAAACTTTCAACTCTGGCCATTTTCGCAAGAAACTTCCACTTATACTATTCGAAAATGTGACATTAAACTTGAAAGTGAACTTGATAACGAAGTGGAAATAGTCGTTGAATGTGAAGACGTCAAGCCCAACTTTGATTTATTGACAATTCAGAATGTTGGccatgattttcaaaatcacttGGGCAATGTGAAAGATACGTTTAAAAAAGAACCTGCAGAGGAAGTGGTACAAGAAACTGATGCTGCAGaacaattgaatttaaatctCGACTTCAAACCCGTCGAACAAAGTAAAAAACGAAGTATTACAAAAGAGTCAGACCatcaacataaaattaaaaatcagatTGATAAGGTGCATAGTGGTGGTGTCTACGCGTGTGAAATATGtggaaaaacatttaaatataaaagtaatattggAACTCACGTAAATTCGgtgcataaaaaaatctcttacatatgtgatatttgcggaaagactTTTTCAAGGAAAGATAATCTCAAAATCGACATTGAAGGGGTGCACTGTGGTGTCAAACATCcgtgtgatatttgcggaaagttattttcaaaaaaaagtaatatcaaAACCCACATCGATGAGGTACATAATGGGATTACCCACTCATGTGATGTTTGCAGAAAATCGTTTCCAAATAAAACTAGTCTTATAAACCATAACAATTCggtgcataaaaaaataacacatgCATGCAATttatgcgaaaagaaattctcaaCCAAGACGTATCTCAAAGTTCACATTGATGtggtgcacaatggtgtcagaTATACGTGCAATATATGTGGAAGGACGTATAAAGGAAAGAGTGAACTGTATAAGCACGTTCAATCAGTACATAATGGTGTCAAACATCCATGCGATGTTTGCAGAAAATTGTTTCCAAATAAAACTAGTCTTATAAACCATAACAATTCggtgcataaaaaaataacacatgCATGCAATttatgcgaaaagaaattctcaaCCAAGACGTATCTCAAAGCTCACATCGATGtggtgcacaatggtgtcagaTATTCATGCAATATATGTGGAAAGACGTATAAAGGAAAGAGTGAACTGTATAAGCATGTTCAATCAGTACACAATGGTGTCAAACAtccatgtgatatttgcggaaagtcATATACTCAGAAAAAATGTCTCAAAATCCATATCGATTCAGTGCACAAGTGTCGTAAACATGCATGTGACATTTGTGGAAAGACATTTACACAGAAGTATTATCttaaaatccacatcgattcagTACATCCCTCATAA
- Protein Sequence
- MESRDVLNSAVRVKEEPGDESLIENDYEAIDEKPDPKNFQLWPFSQETSTYTIRKCDIKLESELDNEVEIVVECEDVKPNFDLLTIQNVGHDFQNHLGNVKDTFKKEPAEEVVQETDAAEQLNLNLDFKPVEQSKKRSITKESDHQHKIKNQIDKVHSGGVYACEICGKTFKYKSNIGTHVNSVHKKISYICDICGKTFSRKDNLKIDIEGVHCGVKHPCDICGKLFSKKSNIKTHIDEVHNGITHSCDVCRKSFPNKTSLINHNNSVHKKITHACNLCEKKFSTKTYLKVHIDVVHNGVRYTCNICGRTYKGKSELYKHVQSVHNGVKHPCDVCRKLFPNKTSLINHNNSVHKKITHACNLCEKKFSTKTYLKAHIDVVHNGVRYSCNICGKTYKGKSELYKHVQSVHNGVKHPCDICGKSYTQKKCLKIHIDSVHKCRKHACDICGKTFTQKYYLKIHIDSVHPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482890;
- 90% Identity
- iTF_01482890;
- 80% Identity
- iTF_01482890;