Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000048.1:472288-474156[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.18 34 5.3 0.0 22 44 157 176 155 176 0.93

2 12 0.018 3.6 8.5 0.2 18 44 181 204 179 204 0.90

3 12 0.0065 1.3 9.9 0.8 19 44 210 232 207 232 0.91

4 12 0.0022 0.44 11.4 0.9 19 44 238 260 235 260 0.94

5 12 0.0069 1.4 9.8 0.5 19 44 266 288 263 288 0.92

6 12 0.025 5 8.0 6.8 19 44 322 344 304 344 0.79

7 12 0.093 18 6.2 0.4 19 43 350 371 347 372 0.81

8 12 0.0066 1.3 9.9 0.8 18 44 377 400 361 400 0.81

9 12 0.087 17 6.3 4.9 18 44 405 428 402 428 0.92

10 12 0.00039 0.077 13.8 1.6 19 44 434 456 431 456 0.95

11 12 0.092 18 6.2 3.9 18 43 489 511 477 515 0.81

12 12 0.043 8.5 7.3 0.5 19 44 518 540 513 540 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.18	34	5.3	0.0	22	44	157	176	155	176	0.93
2	12	0.018	3.6	8.5	0.2	18	44	181	204	179	204	0.90
3	12	0.0065	1.3	9.9	0.8	19	44	210	232	207	232	0.91
4	12	0.0022	0.44	11.4	0.9	19	44	238	260	235	260	0.94
5	12	0.0069	1.4	9.8	0.5	19	44	266	288	263	288	0.92
6	12	0.025	5	8.0	6.8	19	44	322	344	304	344	0.79
7	12	0.093	18	6.2	0.4	19	43	350	371	347	372	0.81
8	12	0.0066	1.3	9.9	0.8	18	44	377	400	361	400	0.81
9	12	0.087	17	6.3	4.9	18	44	405	428	402	428	0.92
10	12	0.00039	0.077	13.8	1.6	19	44	434	456	431	456	0.95
11	12	0.092	18	6.2	3.9	18	43	489	511	477	515	0.81
12	12	0.043	8.5	7.3	0.5	19	44	518	540	513	540	0.92

Sequence Information

Coding Sequence: ATGAATTCGAGTGGTGTATTTAACTGTGTCTTtagagTCAAAAGAGAGCCCTGTGATGAGCTGCTTACCGAAACTGATTATAAAGCAATTAATAAGATCCTCGATACTGAAAAAATCCAATGCTCGAGATTTCTACAAGAAAAACCAATCAAAATGCTTCAAGAATATGACGAAGATCATGAACGCGAGTTCAATGATGATATTGAGATAGTTGTAGAATGCAAAGACGTAAAGCCCAGTATGGATTTATTAgtagttaaaaaaatggaCGATTATCCTCCAAATCACTTGCCGGATGTGAAATGTAGGTCTGATTATAAAACTCATGATAGAATTAAAATAGAACCTCCGGATGAAGTGAAACAGGAATTTTTCGGCGATGAAGCAACGCAATTGAGATTTGATCGTGGACTTGacggaaaaaatgaaaaaatgacggAAAagtttaataacaaaaatttggaTGTATGTGaaaagacattttcacaaaaaagtaatcttaAAATCCACGTAGATTCAGTACACAATCGTATCACATATCAATGTGATACATGCGGAAAGGAGTACTCAAAGAAAGGTGATCTCAAgaaacacatcgattcggcCCATAATGGTATTAGGCATGCATGTGGTATATGTGGCAAGACATTTTCACAGAAGAGTGATATCAAgaaacacatcgattcggcCCATAATGGTATTAGGCATCCATGTGGTATATGTGGCAAGACATTTTCACAGAAGGGTAATCTCAACAAACACATTGATTCGGCCCATAATGGTATTAGGCATCCATGTGGTATATGTGGCAAGACATTTTCACAGAAGAGTGATATCAAgaaacacatcgattcggcCCATAATGGTATAACACATGCATGTAGTATATGCGGCAAGACATTTCCACAGAAGTGTCATATCAAGAAACACATCAATGcggtgcataataaaatcactcatCCATGTGATATATGCGAAAAGAAGTTCTCAAATGAAAGTAATCTTTACAAACATATAAATTCAACGCACAATGGTATCAGATATGCATGTAGTATTTGCGaaaagacattttcacaaaaaagttATCTCACCATCCACATAGATAAGGTGCACAATAAAGTcacacatgcatgtgatatatgtgagaagaaattttcagaaaaaggtAGTcttaaaaaacacatcgattcggcCCATAATGGTATTATGCATGCATGTAGTATATGCGGGAAGAAATGCTCACAGAAAGATAATCTCAAGAAACACATCAATGCtgtgcataataaaatcactcatCCATGTGATATATGCGAAAAGAAGTTCTCAAATGAAAGTAATCTTTACAGACATATAAATTCAACGCACAATGGTATCAGATATGCATGTagtattttcgaaaaaaaattttcacaaaaaagtaCTCTCACCATCCACATAGATGAGGTGCACAATAATGTcacacatgcatgtgatatatgtgAAAAGAAGTTCTCAAATAAAAGTAATCTTTacaaacataaaaattcaacGCACAATGGTATCAGATATGCATGTAGtatttgcgaaaagaaatcCTCGACGAAGAGtgatctcaaaaaacacatcgattctGTGCACAATAAAATTACTTACACATGCGACCCATGCGGAAACAGATACCCACGAAAGATGCTTCTTAAAGCTCACATTAATGCGGTGCATCATTCACGCATAACAACTTAG
Protein Sequence: MNSSGVFNCVFRVKREPCDELLTETDYKAINKILDTEKIQCSRFLQEKPIKMLQEYDEDHEREFNDDIEIVVECKDVKPSMDLLVVKKMDDYPPNHLPDVKCRSDYKTHDRIKIEPPDEVKQEFFGDEATQLRFDRGLDGKNEKMTEKFNNKNLDVCEKTFSQKSNLKIHVDSVHNRITYQCDTCGKEYSKKGDLKKHIDSAHNGIRHACGICGKTFSQKSDIKKHIDSAHNGIRHPCGICGKTFSQKGNLNKHIDSAHNGIRHPCGICGKTFSQKSDIKKHIDSAHNGITHACSICGKTFPQKCHIKKHINAVHNKITHPCDICEKKFSNESNLYKHINSTHNGIRYACSICEKTFSQKSYLTIHIDKVHNKVTHACDICEKKFSEKGSLKKHIDSAHNGIMHACSICGKKCSQKDNLKKHINAVHNKITHPCDICEKKFSNESNLYRHINSTHNGIRYACSIFEKKFSQKSTLTIHIDEVHNNVTHACDICEKKFSNKSNLYKHKNSTHNGIRYACSICEKKSSTKSDLKKHIDSVHNKITYTCDPCGNRYPRKMLLKAHINAVHHSRITT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482806;
90% Identity: iTF_01482806;
80% Identity: iTF_01482806;