Tden009704.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000031.1:595974-597736[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8e-05 0.016 16.0 0.3 18 44 172 195 157 195 0.89 2 13 0.14 28 5.6 2.2 18 32 200 214 197 223 0.76 3 13 0.057 11 6.9 3.2 18 43 228 250 216 251 0.83 4 13 0.017 3.3 8.6 1.0 19 44 257 279 254 279 0.94 5 13 3.1 6.1e+02 1.3 0.9 18 33 284 296 282 307 0.73 6 13 0.0069 1.4 9.8 0.3 17 44 311 335 306 335 0.90 7 13 0.093 18 6.2 0.7 18 43 340 362 337 363 0.81 8 13 0.0021 0.41 11.5 1.7 19 44 369 391 365 391 0.93 9 13 0.0023 0.45 11.3 1.4 19 44 397 419 394 419 0.91 10 13 0.00037 0.073 13.9 2.2 18 44 424 447 422 447 0.94 11 13 1.8 3.4e+02 2.1 1.0 19 43 453 474 450 475 0.80 12 13 0.37 72 4.3 0.2 19 44 481 503 478 503 0.92 13 13 0.0089 1.7 9.5 2.4 19 43 509 530 506 531 0.94
Sequence Information
- Coding Sequence
- ATGGACTGCAGTGGTCCGTGTAACTGTACTATCAGAGTGAAAGAGGAACCTAGTAATGTTTTGCCGAATGAAAATGATGGGGAAAAGATTGACGAGAAACCCGATCTCAAGAACTTCCAACTCTTACCACATTTGCCAGAAAATTCGACCGATAAACTCcgtaaatttgataaaaatcatgATAGTGAATTTGATGACGAAGTAAAAATAGTCGTTGAATGCCAAGACGTCAAACCCAACATTAATACACTAAaggttgaaaaaattgaagatgatTCTCAAAATTACTTGCGAGATATCGAATATAATGATGgttgtaaaaatcaaaataaaattaaaatagaaccAGTGGCAGTAAAACAAGAAATTGTGGATGACGCCGCAGAAGAATCGAATTTCAATTTCGACCCTATACTTGTCGAACAGATAGAACAAGgaagaattacaaaaaaaatcaacaaagatcgtaacctcaaaacacacACCGATTCGGTTGGTAGTGATACCCCGCCTACTTGTGATATATGCGGAAAGAAAAGCTCAACTGTgagtaatctcaaaaaacacatcgattcgatGCACAATGGTATCAAACATAATTGTAATGTATGCGGcaagaaattttcacaaaagggTCATGTCAACAAACACATCGATTCAGTACACAATAGAGTCACatatgcatgtgatatttgcggaaagaaatacTCTGAGAAGGGTAATCTCAATAAACACGTAAACTCTCTACACCACGGTATCActcatgcatgtgatatttgcggaaataAATTTACAGATAAGAGTAGTCTCAAAAAGCACATTGAGGCGAAGCACAATGATGTCACCCATACTTGCGATACTTGCCAAAAGAAATTCACAAGCAAGAGTTATCTGAAAGTACACACCGATTCAGTGCACAACGGTGTCACAATCGCATGTGAtgtttgcggaaagaaatacTCTCAAACCGGTAGTCTCAAAAAACACGTCGCGtcggtgcataatggtatcaaaCATGCATGTGACttatgcggaaagaaattctcaGACAAAGGTAGTcttaaaaaacacatcgattcgCTACATAACGGTGTGTCCCacgcatgtgatatttgcggaaagaaaaGCTCAACTAAGaataatctcaaaaaacacatcgatacCGCGCACAATGGTGTTAGAtacgcatgtgatatttgcggaaagaaattctcgGGGAAGTGTAGTCTTAAAAGACACATCGACTCGGCGCACAATGGTGTTTCACATGTATGTAATATATGCGGAAATAAATTCTCAGAGAAAAGTAGTcttaaaaaacacatcgattccATGCATAATGGTAGCACACATGCATGTAATGAGTGTGGAAAGTCATTCTCACAACGATATTATCTCAAAACCCACATTGATTcagtgcacaatggtgtcacatATGCATGTGATACTTGTGGAAAGTCGTTTAGCCTTCAAAGTgctctcaaaatccacatcgatacGAAACATAAAGGTGTGACCCACGCATGCATTACTTGTGGAAAAACATTCGCAAATAAGAGTAATCTACAAAAACACATCAAGACGATACATTATGGTATTATGGATGTGATAATTGTGTAA
- Protein Sequence
- MDCSGPCNCTIRVKEEPSNVLPNENDGEKIDEKPDLKNFQLLPHLPENSTDKLRKFDKNHDSEFDDEVKIVVECQDVKPNINTLKVEKIEDDSQNYLRDIEYNDGCKNQNKIKIEPVAVKQEIVDDAAEESNFNFDPILVEQIEQGRITKKINKDRNLKTHTDSVGSDTPPTCDICGKKSSTVSNLKKHIDSMHNGIKHNCNVCGKKFSQKGHVNKHIDSVHNRVTYACDICGKKYSEKGNLNKHVNSLHHGITHACDICGNKFTDKSSLKKHIEAKHNDVTHTCDTCQKKFTSKSYLKVHTDSVHNGVTIACDVCGKKYSQTGSLKKHVASVHNGIKHACDLCGKKFSDKGSLKKHIDSLHNGVSHACDICGKKSSTKNNLKKHIDTAHNGVRYACDICGKKFSGKCSLKRHIDSAHNGVSHVCNICGNKFSEKSSLKKHIDSMHNGSTHACNECGKSFSQRYYLKTHIDSVHNGVTYACDTCGKSFSLQSALKIHIDTKHKGVTHACITCGKTFANKSNLQKHIKTIHYGIMDVIIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482828;
- 90% Identity
- iTF_01482828;
- 80% Identity
- iTF_01482828;