Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000131.1:337233-339068[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.023 4.5 8.1 1.2 11 43 166 195 159 200 0.83

2 14 0.0058 1.1 10.1 0.1 19 43 202 223 196 224 0.94

3 14 0.49 97 3.9 3.5 18 43 229 251 226 252 0.79

4 14 0.015 3 8.7 0.3 18 44 257 280 254 280 0.94

5 14 0.0011 0.22 12.3 1.0 19 43 286 307 284 308 0.95

6 14 0.067 13 6.7 2.8 18 44 313 336 310 336 0.92

7 14 0.0011 0.22 12.3 1.0 19 43 342 363 340 364 0.95

8 14 2.4 4.6e+02 1.7 2.6 18 34 369 387 366 392 0.73

9 14 0.0073 1.4 9.7 0.9 18 44 397 420 394 420 0.94

10 14 0.0011 0.22 12.3 1.0 19 43 426 447 424 448 0.95

11 14 5.9 1.2e+03 0.4 4.3 19 38 454 470 451 476 0.71

12 14 0.018 3.5 8.5 0.1 19 44 482 504 479 504 0.94

13 14 0.017 3.3 8.6 0.5 19 43 510 531 508 533 0.89

14 14 0.00046 0.09 13.6 4.2 1 44 521 560 521 560 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.023	4.5	8.1	1.2	11	43	166	195	159	200	0.83
2	14	0.0058	1.1	10.1	0.1	19	43	202	223	196	224	0.94
3	14	0.49	97	3.9	3.5	18	43	229	251	226	252	0.79
4	14	0.015	3	8.7	0.3	18	44	257	280	254	280	0.94
5	14	0.0011	0.22	12.3	1.0	19	43	286	307	284	308	0.95
6	14	0.067	13	6.7	2.8	18	44	313	336	310	336	0.92
7	14	0.0011	0.22	12.3	1.0	19	43	342	363	340	364	0.95
8	14	2.4	4.6e+02	1.7	2.6	18	34	369	387	366	392	0.73
9	14	0.0073	1.4	9.7	0.9	18	44	397	420	394	420	0.94
10	14	0.0011	0.22	12.3	1.0	19	43	426	447	424	448	0.95
11	14	5.9	1.2e+03	0.4	4.3	19	38	454	470	451	476	0.71
12	14	0.018	3.5	8.5	0.1	19	44	482	504	479	504	0.94
13	14	0.017	3.3	8.6	0.5	19	43	510	531	508	533	0.89
14	14	0.00046	0.09	13.6	4.2	1	44	521	560	521	560	0.86

Sequence Information

Coding Sequence: ATGGAACCAAGTGAAAAGTTCAACTGTGGTGtcagaataaaaaaagaacccGTTGATGTGTCCTTTACTGATAATGAGTACGATATCATTGACACGAAACGTGACATTGAAGATTTTcaattcttcaaattttcacagaaAAATCCAGTACATATGCTTCAAAAAGCTGACGAAAATCACGAAGGTGATCTTGACGAGTTGGCAATCGAGTTTGAATGTCAAGAGGTGAAGCTCAACATGGATTTATTAGCagttacaaaaattgaagattgCTCACAAAATCACTTGCAGGGAATGGAAGATGGAGATGGCTATCAAactcgaaataaaattaaagtagaaACTTTGGgagcagtaaaaaaagaatcatttgTGGACGACGACGCAAAACAATTGAATATGGATTTCGACCGTGGTGTCAGCGAGCCAAGAGAGGAAAGCAGTGTCACAAAAGAGTTTACCGATAACCATAGATTCGATACGCAAACCATAACAACGCGTAGTGGTACTGACATTGCATGCGAGATGTGTAGAAAGAAATTCTCTAACAAATGgaatctcaaaatccacatcgattcgatACATAATGGTATCACCCACGCGTGTGATACGTGTGAAAAGTCATTTGCTGGTAAAAGcaatctcaaaaaacacatcgattcggtgcatgCTGGTATCAAACATTCATGCCGTacatgcggaaagaaattttcacaaagGAGTTATCTAAAAAACCACACCATTACAGTGCACAAGGGTGTCCCAAATGTTTGTCATACATGCGGAAAGTCATTTGCTGCTAAAAACAATCTCAAAGttcacatcgattcggtacaTAATGGTATCACTCACGCATGTGATATATGTAGAAAGAAATTCACTGAGAAGAGCAATCTTACAAAACACATCGTTTCGGTGCATGCTGGTATCAAACATTCATGCCATACATGCGGAAAGTCATTTGCTTCTAAAAGCAACCTCAAAGttcacatcgattcggtacataatggtatcactcacgcatgtgatatatgcagAAAGAAATTCACTGAGAAGAGCAATCTTACAAAACACATCGTTTCGGTGCATGCTGGTATCAAACATTCATGCCATacatgcggaaagaaattttcacaaaagatTTATCTAAAAAGCCACACCATTACAGTGCACAAGGGTGTCCCAAATGTTTGTCATACATGCGGAAAGTCATTTACTGCTAAAAGCAACCTCAAAGttcacatcgattcggtacaTAATGGTATCACTCACGCATGTGATATATGTAGAAAGAAATTCACTGAGAAGAGCAATCTTACAAAACACATCGTTTCGGTGCATGCTGGTATCAACCATTCATGCCATacatgcggaaagaaattttcacaaaagggTCATTTAAACAACCATATCAATGCGGTACATAATGGTATCACTTACGCTTGTGATACGTGTGGAAAGTCATTTACTGCTAAAAGCAACCTCAAAGttcacatcgattcggtacaTAATGGTATCACTCACGCGTGTAATACGTGTGGAAAGTCATTTGCTGATAAAAGCAATcttaaaaaacacatcgatttGGTGCATCATAAAGTCACTCATAAATGTGACATATGtggaaagtcattttcacaaaaGAAAAACCTTAAAGCCCACATCGTTATGGCGCATCGCTAA
Protein Sequence: MEPSEKFNCGVRIKKEPVDVSFTDNEYDIIDTKRDIEDFQFFKFSQKNPVHMLQKADENHEGDLDELAIEFECQEVKLNMDLLAVTKIEDCSQNHLQGMEDGDGYQTRNKIKVETLGAVKKESFVDDDAKQLNMDFDRGVSEPREESSVTKEFTDNHRFDTQTITTRSGTDIACEMCRKKFSNKWNLKIHIDSIHNGITHACDTCEKSFAGKSNLKKHIDSVHAGIKHSCRTCGKKFSQRSYLKNHTITVHKGVPNVCHTCGKSFAAKNNLKVHIDSVHNGITHACDICRKKFTEKSNLTKHIVSVHAGIKHSCHTCGKSFASKSNLKVHIDSVHNGITHACDICRKKFTEKSNLTKHIVSVHAGIKHSCHTCGKKFSQKIYLKSHTITVHKGVPNVCHTCGKSFTAKSNLKVHIDSVHNGITHACDICRKKFTEKSNLTKHIVSVHAGINHSCHTCGKKFSQKGHLNNHINAVHNGITYACDTCGKSFTAKSNLKVHIDSVHNGITHACNTCGKSFADKSNLKKHIDLVHHKVTHKCDICGKSFSQKKNLKAHIVMAHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482807;
90% Identity: iTF_01482807;
80% Identity: iTF_01482807;