Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000085.1:11281-13093[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0002 0.04 14.7 1.8 16 44 168 193 155 193 0.83

2 14 0.17 34 5.3 0.7 19 43 199 220 196 225 0.88

3 14 1.6e-05 0.0031 18.3 1.2 19 44 227 249 222 249 0.95

4 14 0.38 74 4.3 0.3 18 29 254 265 251 277 0.78

5 14 0.0088 1.7 9.5 0.2 19 43 283 304 281 305 0.91

6 14 0.29 57 4.6 0.4 18 43 310 332 307 338 0.82

7 14 0.00024 0.047 14.5 1.9 5 44 326 361 323 361 0.79

8 14 0.88 1.7e+02 3.1 0.3 18 43 366 388 363 393 0.85

9 14 0.0004 0.079 13.8 1.1 5 44 382 417 378 417 0.80

10 14 0.0094 1.8 9.4 4.1 19 44 423 445 420 445 0.88

11 14 0.16 31 5.5 0.4 16 40 448 469 446 473 0.72

12 14 0.49 96 3.9 0.2 18 43 478 500 475 501 0.82

13 14 0.0055 1.1 10.1 0.8 18 44 506 529 502 529 0.90

14 14 2.4 4.8e+02 1.7 0.6 19 43 535 556 531 556 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0002	0.04	14.7	1.8	16	44	168	193	155	193	0.83
2	14	0.17	34	5.3	0.7	19	43	199	220	196	225	0.88
3	14	1.6e-05	0.0031	18.3	1.2	19	44	227	249	222	249	0.95
4	14	0.38	74	4.3	0.3	18	29	254	265	251	277	0.78
5	14	0.0088	1.7	9.5	0.2	19	43	283	304	281	305	0.91
6	14	0.29	57	4.6	0.4	18	43	310	332	307	338	0.82
7	14	0.00024	0.047	14.5	1.9	5	44	326	361	323	361	0.79
8	14	0.88	1.7e+02	3.1	0.3	18	43	366	388	363	393	0.85
9	14	0.0004	0.079	13.8	1.1	5	44	382	417	378	417	0.80
10	14	0.0094	1.8	9.4	4.1	19	44	423	445	420	445	0.88
11	14	0.16	31	5.5	0.4	16	40	448	469	446	473	0.72
12	14	0.49	96	3.9	0.2	18	43	478	500	475	501	0.82
13	14	0.0055	1.1	10.1	0.8	18	44	506	529	502	529	0.90
14	14	2.4	4.8e+02	1.7	0.6	19	43	535	556	531	556	0.85

Sequence Information

Coding Sequence: ATGAGATTTCCAACAAGTAAGATGGAATCTGGTGATTTATTCAATCCTGCTGtgagAGTGAAAGAAGAGCATCGTGATGAGCCGCTCAATGCTAatgattatgaaataattgacTTGACACTTACAGTTACTCAAAATGTTAAATGCGAAAGGTCTTGGCATGAAAATTCAgaccACATGCTGCAAGAATATGACAAAAGTCACGAAAATGGACATGACGACATCCAAATCGAATTGGAATGTACAGATATGAAGCCCAATTTATTGGCGAAAATTGAAGATTTCTCTCCAAATCACGGGCAGCATAGCGATGATTATGAAACaggaagcaaaattaaattagaaacTGTCGGGACAGtgaagaaagaaatttttagcGAAGAAGAAACTGATTTGAATTTCGGACGTGGactgaacgaaaaaaatgagaaagaatGTGTTGAAAAGTCGAACTATAAGAAGAGTCTCAAAGCACACGTGGGTATGGTGCAAAGCGGTATCAACAATACATGCGATATATGCCAAAATACGTTCTCAAACAAGAAgaatctcaaaactcacatccATTCGGTACATAATGGTGCCAGTCATGCATGCGATATTTGcagaaatgtttttaaacgAAAAGGTGATCTCAAAAagcacatcgattcggtgcatcaTAAAATAAGGCATCCATGTGATATATGTCAAAAGACATTCTCAGGCAAGAATAATCTCAGAAGACACATCAGATCGGTGCACAAAGCAGTCAATTATAAGTGTGATTCATGTGGTAAGACGTTTACACGAAAGATTTATCTCCAAAACCATATCGACGCAGTGCACAATGGAATCGGctatgcatgtgatatatgccaaaagacattctcagACAAGAGTAATCTTAGAAAGCACAccgattcggtgcataatggtgTCAGTTATACATGCGATTTTTGCGGAAATGATTTTAAACGAAGAGGCGATCTCAAAAAACACGTCGATTCGGTGCATCATAAAATAAggcatgcatgtgatatatgccaaaagacattctcagacaagagtaatctcaaaactcacatcgatTCAATGCATAATGGTGCCAGTTATGCATGCGATATTTgcgaaaatgattttaaacgaAGAGCCGATCTCAAAAAACACGTCGATTCGGTGCATCATAAAATAAggcatgcatgtgatatatgccaaaagacattcgcagacaagagtaatctcaaaactcacatcgatTCAATGCATAATGGTGTTAGACATGCATGTaatatatgccaaaagacattctcagGCAAGAGAAGTATAAAACAACACATCAATTCGATGCATAAAGCAGTCAAGTATACGTGTGATTCATGTGGTAAGACGTTTACACGAAAGATTTCTCTCCAATACCATATCAACGTAGTGCACAATGGATTCGGCTATGTATGTGATAAGTGCGGAACGAAATACACAACGAGAGGTAATCTTAAAACCCACATCGATGCAATACATAATGGTATCAATTATGCATGTggtttttgtgaaaaaaaatataaatatcaaactCAACTCAATAAGCATGTCAAATCATCGCATAATAGTATCATCCATTCATGCGAGACATGTGGAAAGGCATTCGGACAGAGAAGAAATCTTAAAACTCATATCGATGTGGCTCATTGA
Protein Sequence: MRFPTSKMESGDLFNPAVRVKEEHRDEPLNANDYEIIDLTLTVTQNVKCERSWHENSDHMLQEYDKSHENGHDDIQIELECTDMKPNLLAKIEDFSPNHGQHSDDYETGSKIKLETVGTVKKEIFSEEETDLNFGRGLNEKNEKECVEKSNYKKSLKAHVGMVQSGINNTCDICQNTFSNKKNLKTHIHSVHNGASHACDICRNVFKRKGDLKKHIDSVHHKIRHPCDICQKTFSGKNNLRRHIRSVHKAVNYKCDSCGKTFTRKIYLQNHIDAVHNGIGYACDICQKTFSDKSNLRKHTDSVHNGVSYTCDFCGNDFKRRGDLKKHVDSVHHKIRHACDICQKTFSDKSNLKTHIDSMHNGASYACDICENDFKRRADLKKHVDSVHHKIRHACDICQKTFADKSNLKTHIDSMHNGVRHACNICQKTFSGKRSIKQHINSMHKAVKYTCDSCGKTFTRKISLQYHINVVHNGFGYVCDKCGTKYTTRGNLKTHIDAIHNGINYACGFCEKKYKYQTQLNKHVKSSHNSIIHSCETCGKAFGQRRNLKTHIDVAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482824;
90% Identity: iTF_01482824;
80% Identity: iTF_01482824;