Tden017915.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000085.1:434606-436677[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 7.9 1.6e+03 0.0 0.1 33 44 149 160 137 160 0.81 2 18 1.1 2.1e+02 2.8 0.2 19 43 166 187 163 188 0.84 3 18 9.6 1.9e+03 -0.2 1.2 19 43 194 215 187 216 0.80 4 18 0.0018 0.35 11.7 2.2 13 44 216 244 204 244 0.81 5 18 0.01 2 9.3 0.4 19 43 250 271 248 272 0.96 6 18 0.002 0.39 11.6 1.7 19 44 278 300 275 300 0.93 7 18 0.00063 0.12 13.1 0.5 19 44 306 328 303 328 0.95 8 18 1.9e-06 0.00038 21.2 1.9 18 44 333 356 331 356 0.95 9 18 0.57 1.1e+02 3.7 0.2 18 29 361 372 358 384 0.82 10 18 0.0062 1.2 10.0 1.1 19 44 390 412 388 412 0.94 11 18 1.9e-05 0.0038 18.0 0.9 19 44 418 440 415 440 0.95 12 18 0.57 1.1e+02 3.7 0.2 18 29 445 456 442 468 0.82 13 18 0.00081 0.16 12.8 0.3 19 44 474 496 472 496 0.95 14 18 0.014 2.8 8.8 0.2 19 43 502 523 499 524 0.93 15 18 0.098 19 6.1 0.1 19 36 530 547 527 552 0.89 16 18 0.0043 0.85 10.5 2.8 17 44 556 580 549 580 0.89 17 18 0.045 8.8 7.2 2.5 18 43 585 607 583 612 0.84 18 18 1.6 3.2e+02 2.2 3.8 18 43 613 635 601 636 0.84
Sequence Information
- Coding Sequence
- ATGGAATCGAGTGATATATTCAAATCTACCGttagAGTAAAAGACGAACCTCGTGATGAGCTTCTCAATGATAATgattacaaaataattgacACGATACTCCTTACTCAAAATATTAAACGCGAAAGGATTTGGCaagaaaattcagacCAAATGATTCAAGAATTTGTCGAAAATCACGACAATGAACTTGACGACGTACAAATCGAGTTGGAATGTACAGACATGAAGCCCAATTTATTGGCGGTTGCGAAAATTGAAGATTATTCTCCACATCAATGGGAGGATAGTGATGAGTATAAAACaggaagcaaaattaaattagaaacTGTCGGGACAGTGAAGAAAGAAATGTTAAGCGAAGAAGAAACTGATTTGAATTTCGGACGTGGACTCAGGAagcataatgaaaaaagaactGTTTCAAAAGAGGTGAACTATGAACATGGGctcaaaactcacattgaTACTACGCATAATGGAATcacacatgcatgtgatatttgcggaaaatcATTCGGATATAAGAGTCTTCTCCAAAGACACGTCGATTCGTTACATCGTAAAATCACGCATCCATGcgatatatgccaaaagacattcttAGACAAaagttacataaaaaaacacatcgcTTCAGTGCATAATGGTGGCTCAtatacatgtgatatttgcggaaagaacTTCACAACGAAAGGTAATCTTAAAAACCACATTGATTCTACGCATAATGGAATCACGCATccatgtgatatatgccaaaagacattctcagACAAGAGTAATGTTAGAAAGCACATCACTACGGTGCATATTGGTGTTAGACATGCATGTaatatatgccaaaagacattcgcagacaagagtaatctcaaaactcacatcgatTCGTTACATCGTAAAATCACGCATccatgtgatatatgccaaaagacattctcagacaagagtaatctcaaaaaacacatcgattcggtgcataattGTGTCACacatgaatgtgatatttgcggaaagacattCTCAGGCAAGAGTAATCTCAGAAGACACATCAGATCGGTGCACAAAACAGTCAATTATACGTGTGATTCATGTGGTAAGACGTTTACACGAAAGATTTATCTCCAAAACCATATCGACGCAGGGCACAATGGAATCGGctatgcatgtgatatatgccaaaagacattcacacGAAAAAGtcatctcaaaactcacatcgattcggtgcataatggtgTCACATATGCGTGTAATGCATGCCCAAAGACATTCTCAGGCAAGAGTAATCTCAGAAGACACATCAGATCGGTGCACAAAACAGTCAATTATACGTGTGATTCATGTGGTAAGACGTTTACACGAAAGATTTATCTCCAAAACCATATCGACGCAGGGCACAATGGAATCGGctatgcatgtgatatatgccaaaagacattcacacaaaaaagtaatctcaaaactcacatcgattcggtgcataatggtgTCACATATGcgtgtgatatttgcggaaatgTATTCAATCGTAAAGATGATCTCAAAAGACACATCGATTCAGTGCATCATAAAATAAggcatgcatgtgatatatgccaaaagacattctcagACAAGAGTAGTCTAAAAAGGCTTATCGATTCACAGCATAAAGATATCACCTATACGTGTAACATatgcgaaaagaaaattaaatttaaaagtaaactGAAAAAACATATTGATGCAATGCACAATGGAATCACCTACGTATGTAAtttctgtgaaaaaaaatttaaaaatcaaaattatctcAATAAGCATGTCAAAACGTCGCATAATGATATCACTCATGCATGCAAGACATGCGGAAAGACGTTTGCACAGAAAAGAAGTCTTAAAGCTCATATCGATATGGCCCATAACTCACACATTACGATTTGttaa
- Protein Sequence
- MESSDIFKSTVRVKDEPRDELLNDNDYKIIDTILLTQNIKRERIWQENSDQMIQEFVENHDNELDDVQIELECTDMKPNLLAVAKIEDYSPHQWEDSDEYKTGSKIKLETVGTVKKEMLSEEETDLNFGRGLRKHNEKRTVSKEVNYEHGLKTHIDTTHNGITHACDICGKSFGYKSLLQRHVDSLHRKITHPCDICQKTFLDKSYIKKHIASVHNGGSYTCDICGKNFTTKGNLKNHIDSTHNGITHPCDICQKTFSDKSNVRKHITTVHIGVRHACNICQKTFADKSNLKTHIDSLHRKITHPCDICQKTFSDKSNLKKHIDSVHNCVTHECDICGKTFSGKSNLRRHIRSVHKTVNYTCDSCGKTFTRKIYLQNHIDAGHNGIGYACDICQKTFTRKSHLKTHIDSVHNGVTYACNACPKTFSGKSNLRRHIRSVHKTVNYTCDSCGKTFTRKIYLQNHIDAGHNGIGYACDICQKTFTQKSNLKTHIDSVHNGVTYACDICGNVFNRKDDLKRHIDSVHHKIRHACDICQKTFSDKSSLKRLIDSQHKDITYTCNICEKKIKFKSKLKKHIDAMHNGITYVCNFCEKKFKNQNYLNKHVKTSHNDITHACKTCGKTFAQKRSLKAHIDMAHNSHITIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482788;
- 90% Identity
- iTF_01482788;
- 80% Identity
- iTF_01482788;