Tden002329.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000004.1:157854-167878[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.054 1.7e+03 -1.3 2.6 115 153 15 51 2 63 0.39 2 2 7e-11 2.2e-06 28.0 28.9 31 247 62 278 55 302 0.57
Sequence Information
- Coding Sequence
- ATGCCAGTTTCGCCCTCGCGGAGTCGTTCCGTTGATATGAAGAGGCCACGCGTTGAGAGAGCTGCCCAACGTGAACGCGAGAGGCAAGCACGTGCAGCTATGTCGCATCAACACATCGACCACTCACGTAGTCGCTCAGCCAATATCCATCACAGCTCGCCCAGGAATGAGGAGGACTGTGACAATTCCTTGTTCGGCGCCCCAGTTCggGTCAATCCAGAGTTTCAGGACCGCCTAACGCAACAGATACAATCCAAATTGGGTAATCATTCTTTAGTGAAGCACCTGCTTACCGATAGCGGCAAGGGCCTCATAGGAATAGACGGCGGGCAAGCGAATCGAAGCGGACTCTCGAAGAGCTCCGCCTTGGTGCAGCCTGGCGGCGCGTTGAATCCCAACGAGTTCAAAAAGCCGGGAGGTCCGCGGCcaccctcgtcgtcgtccggcCAAGCGCCACCATCGAGCAggtcaagcagcagcagcagcagcagcagcagcgctcaCAAGTCCGGATACCCTCCTCCCTCGTCGAGGCTAGGGGGAAACTTTTcctctcagcagcagcaacagcaacagcagcaacaatcgTCACAGAAACCCACGAGTCACAGTAGCGATCACAATAAATTTGCGCCGAGCAGTAGAGGGAGTCACGCATTTAATGCTCCGAACTATGACAATGCCCAGAATTCGAGTTCGAGCTCAAGTTCGTCGAATCGTATGCGCGAAGTGAACTCACAGAAGTCGTCGTCGAAGAGCTACTCGGATATGTCCCGGTATCAAATGCCAGTGAAACAAGAAAATCCAATTAGCCACGAACAAATCAACCatgAACCAAATAAGTTGGCTGCTTTACACGTAAATAAGCTGCCCAACTTGAACGCAGACGAGTCCAAAAACAAAGTTTTGGATTTTCTCAACCAATGCCAAACTTTACCTGAACCTGTTGACAACATTCATCTACCTCCGGCAGCGAAAAATGCATTACTTTTCGGTTTTCTGGCTAGTTAA
- Protein Sequence
- MPVSPSRSRSVDMKRPRVERAAQRERERQARAAMSHQHIDHSRSRSANIHHSSPRNEEDCDNSLFGAPVRVNPEFQDRLTQQIQSKLGNHSLVKHLLTDSGKGLIGIDGGQANRSGLSKSSALVQPGGALNPNEFKKPGGPRPPSSSSGQAPPSSRSSSSSSSSSSAHKSGYPPPSSRLGGNFSSQQQQQQQQQQSSQKPTSHSSDHNKFAPSSRGSHAFNAPNYDNAQNSSSSSSSSNRMREVNSQKSSSKSYSDMSRYQMPVKQENPISHEQINHEPNKLAALHVNKLPNLNADESKNKVLDFLNQCQTLPEPVDNIHLPPAAKNALLFGFLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483856;
- 90% Identity
- iTF_01483856;
- 80% Identity
- -