Basic Information

Insect: Trichogramma brassicae
Gene Symbol: -
Assembly: GCA_902806795.1
Location: CADCXV010000699.1:605349-607796[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.8 9e+02 -0.1 0.5 19 29 189 199 183 211 0.75

2 18 1.8 2.1e+03 -1.2 1.1 19 43 246 267 234 272 0.77

3 18 0.017 19 5.3 1.4 19 44 274 296 269 296 0.92

4 18 0.087 98 3.0 2.9 18 41 301 326 299 328 0.79

5 18 0.001 1.1 9.2 0.6 19 43 328 349 323 350 0.92

6 18 0.0019 2.1 8.3 1.5 19 44 356 378 351 378 0.88

7 18 0.00051 0.58 10.1 1.3 19 43 384 405 382 406 0.92

8 18 0.029 32 4.5 0.6 19 38 412 434 408 438 0.75

9 18 0.04 45 4.1 0.4 19 43 440 461 435 467 0.85

10 18 0.00015 0.17 11.9 1.7 19 43 468 489 460 490 0.91

11 18 0.00029 0.32 11.0 0.9 18 44 495 518 493 518 0.93

12 18 0.035 39 4.3 0.7 19 43 524 545 521 546 0.84

13 18 2.2 2.5e+03 -1.5 0.2 19 43 552 573 551 579 0.68

14 18 0.0033 3.7 7.6 2.8 19 44 580 602 567 602 0.91

15 18 0.029 33 4.5 0.3 18 39 607 625 605 630 0.76

16 18 0.89 1e+03 -0.2 2.7 18 29 635 646 624 662 0.79

17 18 5.9e-06 0.0066 16.4 4.0 16 44 661 686 648 686 0.89

18 18 0.0012 1.4 8.9 0.3 18 44 691 714 688 714 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.8	9e+02	-0.1	0.5	19	29	189	199	183	211	0.75
2	18	1.8	2.1e+03	-1.2	1.1	19	43	246	267	234	272	0.77
3	18	0.017	19	5.3	1.4	19	44	274	296	269	296	0.92
4	18	0.087	98	3.0	2.9	18	41	301	326	299	328	0.79
5	18	0.001	1.1	9.2	0.6	19	43	328	349	323	350	0.92
6	18	0.0019	2.1	8.3	1.5	19	44	356	378	351	378	0.88
7	18	0.00051	0.58	10.1	1.3	19	43	384	405	382	406	0.92
8	18	0.029	32	4.5	0.6	19	38	412	434	408	438	0.75
9	18	0.04	45	4.1	0.4	19	43	440	461	435	467	0.85
10	18	0.00015	0.17	11.9	1.7	19	43	468	489	460	490	0.91
11	18	0.00029	0.32	11.0	0.9	18	44	495	518	493	518	0.93
12	18	0.035	39	4.3	0.7	19	43	524	545	521	546	0.84
13	18	2.2	2.5e+03	-1.5	0.2	19	43	552	573	551	579	0.68
14	18	0.0033	3.7	7.6	2.8	19	44	580	602	567	602	0.91
15	18	0.029	33	4.5	0.3	18	39	607	625	605	630	0.76
16	18	0.89	1e+03	-0.2	2.7	18	29	635	646	624	662	0.79
17	18	5.9e-06	0.0066	16.4	4.0	16	44	661	686	648	686	0.89
18	18	0.0012	1.4	8.9	0.3	18	44	691	714	688	714	0.91

Sequence Information

Coding Sequence: ATGGAATCGAGCAACGTATTCAATCCAACCGTtagAATTAAAGAGGAAATAACGGATCAGTCGCTCATGGAGTATGATGATTACGACATAATGAACGAGGCATCCGACAGcaaaaatttccaattctCAAGTGTTAAGCGGGAAAATTCTATCAATGAGATTCAAAAGTTTGAACAAAATCATGATTACGAACTTGACGACGACCTGCACGTAGAATTTGAATGTCAGGACGTGAAGATAGACGTAAATTCATCGGTGATCAGGAAAATTGACGATTGTTCTCAACGATACTCGCAAGACACGATTAAAATAGAGACTGCGGGAGTCGTGAAAGAAGAATTAGTTGCTGACGATTCGGAAGATTTGAATGCAAATGTCGAAGGCGAGCTCGGCCAGAGacataaaattgcaaaagAGGTCAATCGTGGAAATAAACTCAGAACAAATATTGATGTGGCGAATAATAGTATTGCTCGAGCTTGCGATAAGCGCGAAAAGACATTCATGCGAAAGAGACCTCTGGAAGTCCACCCAAATAGTGTTCATGATGATATCACTCATCCATGTCATATTTGTGGAAAGTCATTCGGACAAAAGagttatctcaaaatccacacgAATAGGCTCCACAATAATTTTAAGCATTACCAGTGTGACGATTGTCAAAAGTTATTCACTACAAAAGCAGATCTAAAAATTCACGtcgattcggtgcatcatAAAATAAGGCATGGATGTGATACTTGTGGAAAATCATTCAGACAAAAGGTTCATCTAAAGGTCCACATCGAGTCGGTGCATCGTAAAATTAGGCATCCGTGcgatatatgccaaaagacattcgCACATAAAAGGagtctcaaaaaacacatcgaaacggtgcataatggtgtcacacatgaatgcgatatttgcggaaaTGATTTTAAACGAAGATGCGATCTTAAAACTCAACTCATGCATCATAAAATAAGGCATGCATGTGATATGTGCGAAAAGACATACTCAGACAAGAGTAGTCTCAAAAagcacatcgattcggtgcatcatAAAATCATGCATCCATGTAATAAATGCCAAAAGACATTTTCAGAAAGAGGTAGTCTAAAAAggcacatcgattcggtgcacaaGCGAGTCGGGCATGCATGTActatatgccaaaagacattctcagACAAGAGTAATCTTAAAGCTCACATTAAAGCGATTCACAGTGGTGCCAGCCATGCAtgcgatatttgcggaaaTGTTTTTAAACGAAGAGGAATTCTCAAAACTCATGTCAATTTTGTGCATCATAAAATTACGCAtccatgtgatatatgccaaaagacattcacacagAAAAGgaatctcaaaatccacatcgattttGTGCACAACAAAATCACGCATCCATGTAATAaatgccaaaagacattctcagACAAGAGTAATCTTAAAGCTCACATTAGAGCGATTCACAATGGTGTCAGACATGAAtgcgatatttgcggaaagataTTCTCACTAaaaggtaatctcaaaaagcacatcgattcggtgcataatggcgTCAGTCACGCAtgcgatatttgcggaaaTGTTTTTAAACGAAGAAGCGATCTCAAAATTCACGtcgattcggtgcatcatAATATAAGGCATGGATGTGATACTTGTGGAAAATCATTCAGACAAAAGGTTCATCTAAAGgtccacatcgattcagtgcatCGTAAAATTAGGCATCCATGcgatatatgccaaaagaTATTCGCACATAAAACGagtctcaaaaaacacatccaaacggtgcataatggtgtcacacatgaatgcgatatttgcggaaaTGTTTTTAAACGAAGAAGCGATCTCAAAATTCACGTCGATTCGTTGCATCATAAAATAAGgcatgcatgtgatatatgccaaaagacattcgCACAAAAGGGccatctcaaaatccacaccgattcggtgcataataaaatcatgcacacatgtgatatatgccaaaagacataCTCAGGCAAGAGTCGTCTCAAAAGACATATCGTTTCGGTGCATCGTAAAATCACGTACacgtgtgatatttgcggaaaaaaGTTCACAGAGAAGAGtgatgtaaaaaaacacatcgatagTAAGCACAATGGTGACACTCGCGCACATACAActaaataa
Protein Sequence: MESSNVFNPTVRIKEEITDQSLMEYDDYDIMNEASDSKNFQFSSVKRENSINEIQKFEQNHDYELDDDLHVEFECQDVKIDVNSSVIRKIDDCSQRYSQDTIKIETAGVVKEELVADDSEDLNANVEGELGQRHKIAKEVNRGNKLRTNIDVANNSIARACDKREKTFMRKRPLEVHPNSVHDDITHPCHICGKSFGQKSYLKIHTNRLHNNFKHYQCDDCQKLFTTKADLKIHVDSVHHKIRHGCDTCGKSFRQKVHLKVHIESVHRKIRHPCDICQKTFAHKRSLKKHIETVHNGVTHECDICGNDFKRRCDLKTQLMHHKIRHACDMCEKTYSDKSSLKKHIDSVHHKIMHPCNKCQKTFSERGSLKRHIDSVHKRVGHACTICQKTFSDKSNLKAHIKAIHSGASHACDICGNVFKRRGILKTHVNFVHHKITHPCDICQKTFTQKRNLKIHIDFVHNKITHPCNKCQKTFSDKSNLKAHIRAIHNGVRHECDICGKIFSLKGNLKKHIDSVHNGVSHACDICGNVFKRRSDLKIHVDSVHHNIRHGCDTCGKSFRQKVHLKVHIDSVHRKIRHPCDICQKIFAHKTSLKKHIQTVHNGVTHECDICGNVFKRRSDLKIHVDSLHHKIRHACDICQKTFAQKGHLKIHTDSVHNKIMHTCDICQKTYSGKSRLKRHIVSVHRKITYTCDICGKKFTEKSDVKKHIDSKHNGDTRAHTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01481695;
90% Identity: iTF_01481695;
80% Identity: iTF_01481695;