Tbra004263.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- FTZ-F1
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000313.1:553282-585612[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.88 7.4e+03 -4.1 12.3 106 181 35 105 5 161 0.43 2 4 2 1.7e+04 -10.9 16.7 83 155 182 265 135 288 0.49 3 4 4.9e-17 4.1e-13 49.4 5.0 1 32 385 415 385 472 0.73 4 4 1e-70 8.7e-67 226.2 2.6 206 408 498 697 487 698 0.97
Sequence Information
- Coding Sequence
- ATGTTATTAGAGATGGAGCAGCACTCGGGCCTCATGTCCCTCAATATGTCTCCGTTCCAAATGAGCCCCCAGAACAGTCCTCAGGGCGGCGCGGGCAACAACGCCCCGGGTCAGTcccaacaacagcagcaacagcagcaacaacaacagtccCAGACCCATCAGTacggctcgtcgtcgtactgCGCCCAGAGTCCCACCGGTAGTTTCGGCCAGCCGCGTAGCGCTCAGATGGGCTCGCAGCAACACAACGGCCAGCAACAGGCCCAAAGCGCCAGCCCCATGACGAGCTTCGAGTCGGCCTTTTACGAGTCGACCAGCCTCGAGGAGCGCTGTCCCATGTGCGGCGACAAAATGTCCGGCACCTACCCCTATCACGTCCTCACTTGTAATACCTGTAAAAACTACTTTAAGCAATCCACGACGCCGTGCAACTCTAAAAAGGTCTACACAGTTATGTACTCGCCCACAGGTCCCGGTGGTGGCAACGCGGCcgggggcggcggcggcaactcCAACGCCGCCACGTCGCTCAGCCTCGTCGACGGTCAGCAGCAATCCTCGGCTTCCACCAGCTATATGACAGCCTCGCCCAGTCACAGTGGCGctggcaacaacaacaacagcagcaacagtaacaataacaacagtagcaacaacaacagcaacggaCACTCGACGAATCCGAGTCAGCAGCTGCACCAGCAGCATCACGGCacgagcagcaacagtagtAATAACAGTAGTCCGACGACCAATAGCACGAcgaacaataacaacaacaacagtagcagcaacaacaataacaataacggCAGCGCCTCGGTGCTCGCCGCGGGCCTGTGCCATCCCTCGCTCGGCGTCGCGGCGGGCCTCGGCGTCAGCGTCGTCGCGGCGGGCTCCTCCGCGGACTTCAGCGACACGAAGGACGCCATCGAGGAGCTCTGCCCCGTCTGCGGCGACAAGGTCTCGGGCTATCACTACGGCCTGCTCACTTGCGAGTCGTGCAAGGGCTTCTTCAAGCGCACCGTGCAAAACAAGAAGGTGTACACCTGCGTGGCCGAGCGCACCTGCCACATCGACAAGACCCAGCGCAAGCGGTGTCCCTACTGCCGCTTCCAGAAGTGCCTCGAGGTCGGCATGAAGCTCGAGGCCGTGCGAGCCGACAGGATGCGAGGAGGTAGAAACAAATTCGGACCCATGTACAAGCGCGACAGGGCGCGGAAGCTGCAGATGATGCGCCAGCGCCAGCTCGCCATACAGACGCTGTCGCGCGGCACGGCGCTCGGCGACGCGGTCAGCTACCCGAACACCGTGGCGCCCCTGTTCCACATCAAGCAGGAGATCCAGATACCGCAGGTGTCGTCGCTCACGTCGTCGCCGGACTCGTCGCCGTCGCCCGCCGCGGTGGCGGCGGGCCTCGTGGGCGGCAACGGCAACAATCCCGCGGGCAGCGGCGGCGTCTCGGGGAGCCAGACCTACAATCAGTGCGAGGTCGACCTGTTCGAGCTCATGTGCAAGGTACTGGACCAGAACCTCTTCTCGCAGGTCGACTGGGCTCGCAATTcctgttttttcaaagatctCAAGGTCGACGATCAAAtgaagctgctgcagcactCGTGGTCGGACATGCTCGTGCTGGATCACCTGCACCAGAGGATGCACAACAGCTTGCCCGACGAAATAACGCTTACCAATGGTCAAAAGTTCGACCTACTGTGTCTCGGCCTACTGGGGGTGCCGTCGCTGGCGGATCTCTTCCACGGTCTATCCTCGACGTTGCAAGAGCTCAAGTTCGACTTTCACGATTACATATGCATGAAATTCCTCATGCTTCTCAACCACGATGTTCGTGGATTAGCCAACAGAAAGCACGTTCAGGAAGGACACGAGCAGGTTCAACGAGCGCTCCTGGATTACACGATGACAGCCTACCCGACTGTACCTgACAAATTCAACAAACTGATGTCAGTATTACCGGAGATTCACGTGGTCGCGGCGAGGGGCGAGGAGCATCTCTATCAAAAGCACTGCAACGGTGGCGCGCCCACGCAAACCTTACTCATGGAAATGCTGCACGCCAaacgaaaatga
- Protein Sequence
- MLLEMEQHSGLMSLNMSPFQMSPQNSPQGGAGNNAPGQSQQQQQQQQQQQSQTHQYGSSSYCAQSPTGSFGQPRSAQMGSQQHNGQQQAQSASPMTSFESAFYESTSLEERCPMCGDKMSGTYPYHVLTCNTCKNYFKQSTTPCNSKKVYTVMYSPTGPGGGNAAGGGGGNSNAATSLSLVDGQQQSSASTSYMTASPSHSGAGNNNNSSNSNNNNSSNNNSNGHSTNPSQQLHQQHHGTSSNSSNNSSPTTNSTTNNNNNNSSSNNNNNNGSASVLAAGLCHPSLGVAAGLGVSVVAAGSSADFSDTKDAIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERTCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQRQLAIQTLSRGTALGDAVSYPNTVAPLFHIKQEIQIPQVSSLTSSPDSSPSPAAVAAGLVGGNGNNPAGSGGVSGSQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSCFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRMHNSLPDEITLTNGQKFDLLCLGLLGVPSLADLFHGLSSTLQELKFDFHDYICMKFLMLLNHDVRGLANRKHVQEGHEQVQRALLDYTMTAYPTVPDKFNKLMSVLPEIHVVAARGEEHLYQKHCNGGAPTQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01481588;
- 90% Identity
- iTF_01481588;
- 80% Identity
- iTF_01481588;