Tbra012897.1
Basic Information
- Insect
- Trichogramma brassicae
- Gene Symbol
- AGAP009949
- Assembly
- GCA_902806795.1
- Location
- CADCXV010000502.1:994041-1042934[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.059 1e+03 -1.4 1.7 197 213 387 403 329 426 0.52 2 2 2.8e-09 4.8e-05 22.7 25.7 31 236 610 815 592 844 0.60
Sequence Information
- Coding Sequence
- ATGTCCACGGAGACGATGACTTATAAGCTGGGCGATCTTGTCTGGGCCAAAATGAAGGGGTACTCGCCGTGGCCAGGCCGTGTATCAAACCCCATCAAAGATATGAAAAAACCAGCTACTACAAAGAAGATCCCTATATATTGCATATACTTCTTTGGAACAAATAACTATGGATGGATTGATGAAGCTAATATTAAACCATATCAAGAGCACAAGGATCAGTGCAAACAAATGTGTAAAACAGCTAATTTCAAAGAAGCTTGCGATACTATCGAAAACTTCATAAGTGGTGGTGAAGAAACTCCCCCATTAGATGTAGCAACTGTATCTCAAGCTctcaaagataaaaatatccAAGCATCAGACTTGAAATTTGGATTTCTTGGTTTGGGTATCATGGGCAGTGGAATAGTTAAGAATTTATTGAACAGTGGACATAAAGTTGTGATTTGGAACAGGTCACAAGAGAAGTGCAACGATTTTGTCGAGGCAGGAGCTGAAAAGGGTCTCACTCCCGCAGATGTTGTCGCCATGTCTGACATTACTTTCTCTTGCGTAGCAGATCCCCAAGCTGCCAAAGAGATGGTTTTTGGCAATTGCGGAGTATTATCGGAAATCACGGCGGACAAGGGCTACGTCGAGATGACGAGTATCGACGCCGAAACATCGGCCGATATCTGCGAGGCGATCATGGCCAAGGGTGCGCGCTACCTCGAGGCTCAAGTGCAAGGCAGCAAACCGCAGGCCGAGGAAGGCAATCTGGTGATCCTCGGCGCTGGCGATCGGCAATTGTTCGACGACTGCAACAGCTGTTTCCAAGCAATGGGCAAAAACGCCATCTATCTGGGCGAAGTGGGCAATGCTTCGAAAATGAACTTGGTACTTCAAACGATGACTGGAATTTGCTTGGTTGGATTAGCTGAGAGCATGGCTCTGGCCGACCGTGCCGGTCTGCAACAGAAGGATGTGTTGGAGATTATGGAAATGACTTCATTAGCAAGCCCACTGCTTACGGAGAAGGGAAAAGAACCGATACATGTTACGCGAAATTTTAAGAAAGATTATCTTGAAACTTATCTTTCGTGCAAAAATTCGCGTTTGCAGGgaacgagcagcagcagtcgaccTCGACACATGCTACGATTGCTATACGGCCGCAGTAGCGAGTCTCTCTCTAGCAGCAGGTCATCGTGTGCACACGCAGCCAGCAggcagcagctctcgagcAATGTGCAATGGCCAACAcaacgtgttaaacaaAAAGACAAATGGGTACCGAGAATTCTCGTGTTGGCTACCATGTGCAATTACTATCGtgtTGAATGCGTATCAGCTGGATCAACTgataagaattttcaaattttaccatttttaCAAGAGTTCACTCGTTCAAAGATCGATAGACAATTAAGTGGCGCACAAAGCCGCGAGTGCTCGAAAAAAGGCCATATGTTGGACTCATCGCGCAAATATCCtcgcCTCTCGTGTTGGCGTCTCTCAACTtttgcgacgacgacaacgatgtgctgctgctgctccaccATAACTACGAGTTTTATTggtcagcaacagcagcatcttCCACTCCGTTTTGCCCGATGCACGGcatactttttctctctcgttctcggaTTAAATCCCAAGCCCGCCGGTAAGATAGTCCCTACCGGCTCACACTTCCTACCATatgtattCGTTGAGAGAGCTGCCCAACGTGAACGCGAGAGGCAAGCACGTGCAGCTATGTCGCATCAACACATCGACCACTCACGTAGTCGCTCAGCCAATATCCATCACAGCTCGCCCAGGAATGAGGAGGACTGTGACAATTCCTTGTTCGGCGCCCCAGTTCGgGTCAATCCAGAGTTTCAGGACCGCCTAACGCAACAGATACAATCCAAATTGGGTAATCATTCTCTAGTGAAGCACCTGCTTACCGATAGCGGCAAGGGCCTCATAGGAATAGACGGCGGGCAAGCGAATCGAGGCGGACTCTCGAAGAGCTCCGCAGTGCAGCCTGGCGGCGCGTTGAATCCCAACGAGTTCAAAAAGCCGGGAGGTCCGCGGCCACCCTCGTCGTCATCCGGCCAGGCGCCACCATCGAGCAggtcaagcagcagcagcgctcaCAAGTCCGGATACCCTCCTCCCTCGTCGAGGCTAGGGGGAAATTTTCcctctcagcagcagcagcagcaacagcagcagcaacaatcgTCACAGAAACCCACGAGTCACAGTAGCGATCACAATAAATTTGCGCCGAGTAGTAGAGGGAGTCACGCATTTAATGCTCCGAACTATGACAATGCCCAGAATTCGAGTTCGAGCTCAAGTTCGTCGAATCGTATGCGCGAAGTGAACCCACAGAAGTCGTCGTCGAAGAGCTACTCGGATATGTCCCGGTATCAAATGCCAGTGAAACAAGAAAATCCAATTAGCCACGAACAAATCAAGCATGAACCAAATAAGTTGGCTGCTTTACACGTAAATAAGCTGCCCAACTTAACCGCAGACGAGtccaaaaacacaattttggaGTTTCTCAACCAATGCCCAACAGCACCTGCACCTGTTGACACCATTCATCTACCTC
- Protein Sequence
- MSTETMTYKLGDLVWAKMKGYSPWPGRVSNPIKDMKKPATTKKIPIYCIYFFGTNNYGWIDEANIKPYQEHKDQCKQMCKTANFKEACDTIENFISGGEETPPLDVATVSQALKDKNIQASDLKFGFLGLGIMGSGIVKNLLNSGHKVVIWNRSQEKCNDFVEAGAEKGLTPADVVAMSDITFSCVADPQAAKEMVFGNCGVLSEITADKGYVEMTSIDAETSADICEAIMAKGARYLEAQVQGSKPQAEEGNLVILGAGDRQLFDDCNSCFQAMGKNAIYLGEVGNASKMNLVLQTMTGICLVGLAESMALADRAGLQQKDVLEIMEMTSLASPLLTEKGKEPIHVTRNFKKDYLETYLSCKNSRLQGTSSSSRPRHMLRLLYGRSSESLSSSRSSCAHAASRQQLSSNVQWPTQRVKQKDKWVPRILVLATMCNYYRVECVSAGSTDKNFQILPFLQEFTRSKIDRQLSGAQSRECSKKGHMLDSSRKYPRLSCWRLSTFATTTTMCCCCSTITTSFIGQQQQHLPLRFARCTAYFFSLVLGLNPKPAGKIVPTGSHFLPYVFVERAAQRERERQARAAMSHQHIDHSRSRSANIHHSSPRNEEDCDNSLFGAPVRVNPEFQDRLTQQIQSKLGNHSLVKHLLTDSGKGLIGIDGGQANRGGLSKSSAVQPGGALNPNEFKKPGGPRPPSSSSGQAPPSSRSSSSSAHKSGYPPPSSRLGGNFPSQQQQQQQQQQQSSQKPTSHSSDHNKFAPSSRGSHAFNAPNYDNAQNSSSSSSSSNRMREVNPQKSSSKSYSDMSRYQMPVKQENPISHEQIKHEPNKLAALHVNKLPNLTADESKNTILEFLNQCPTAPAPVDTIHLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -