Basic Information

Insect: Tribolium madens
Gene Symbol: ZNF236
Assembly: GCA_015345945.1
Location: JADDYM010000019.1:14625756-14636995[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00028 0.019 15.4 1.0 1 23 98 120 98 120 0.98

2 25 0.00051 0.034 14.6 0.1 1 23 126 148 126 148 0.98

3 25 0.00017 0.011 16.1 0.9 2 23 154 175 154 175 0.97

4 25 0.00021 0.014 15.8 0.5 1 23 181 203 181 203 0.98

5 25 2.8 1.9e+02 2.8 2.7 2 23 215 236 214 236 0.95

6 25 3.6e-06 0.00024 21.3 1.6 1 23 260 282 260 282 0.97

7 25 8.9e-05 0.0059 17.0 1.0 1 23 288 310 288 310 0.97

8 25 0.0005 0.034 14.6 2.1 1 23 316 339 316 339 0.95

9 25 0.015 0.99 10.0 5.2 1 23 349 372 349 372 0.97

10 25 6.1e-07 4.1e-05 23.8 0.7 1 23 450 472 450 472 0.98

11 25 4.9e-06 0.00033 20.9 1.0 1 23 478 500 478 500 0.99

12 25 0.0023 0.16 12.5 4.3 1 23 506 528 506 529 0.96

13 25 0.06 4 8.1 1.1 1 23 534 557 534 557 0.90

14 25 0.0048 0.33 11.5 0.7 2 23 601 622 600 622 0.96

15 25 0.34 23 5.7 4.0 1 23 628 650 628 650 0.96

16 25 1.2e-05 0.00083 19.7 0.5 3 23 658 678 656 678 0.97

17 25 0.0042 0.29 11.7 2.9 1 23 684 706 684 706 0.98

18 25 0.00018 0.012 16.0 2.5 2 23 944 965 943 965 0.96

19 25 6.6e-06 0.00044 20.5 7.3 1 23 976 998 976 998 0.98

20 25 1.1e-05 0.00072 19.8 2.1 1 23 1004 1026 1004 1026 0.98

21 25 0.00019 0.013 15.9 0.9 1 23 1034 1056 1034 1056 0.97

22 25 0.5 34 5.2 5.2 1 23 1062 1085 1062 1085 0.94

23 25 0.00025 0.017 15.6 2.0 2 23 1215 1236 1214 1236 0.96

24 25 9.4e-06 0.00063 20.0 0.8 1 23 1242 1264 1242 1264 0.98

25 25 0.0013 0.085 13.3 2.1 1 23 1270 1293 1270 1293 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00028	0.019	15.4	1.0	1	23	98	120	98	120	0.98
2	25	0.00051	0.034	14.6	0.1	1	23	126	148	126	148	0.98
3	25	0.00017	0.011	16.1	0.9	2	23	154	175	154	175	0.97
4	25	0.00021	0.014	15.8	0.5	1	23	181	203	181	203	0.98
5	25	2.8	1.9e+02	2.8	2.7	2	23	215	236	214	236	0.95
6	25	3.6e-06	0.00024	21.3	1.6	1	23	260	282	260	282	0.97
7	25	8.9e-05	0.0059	17.0	1.0	1	23	288	310	288	310	0.97
8	25	0.0005	0.034	14.6	2.1	1	23	316	339	316	339	0.95
9	25	0.015	0.99	10.0	5.2	1	23	349	372	349	372	0.97
10	25	6.1e-07	4.1e-05	23.8	0.7	1	23	450	472	450	472	0.98
11	25	4.9e-06	0.00033	20.9	1.0	1	23	478	500	478	500	0.99
12	25	0.0023	0.16	12.5	4.3	1	23	506	528	506	529	0.96
13	25	0.06	4	8.1	1.1	1	23	534	557	534	557	0.90
14	25	0.0048	0.33	11.5	0.7	2	23	601	622	600	622	0.96
15	25	0.34	23	5.7	4.0	1	23	628	650	628	650	0.96
16	25	1.2e-05	0.00083	19.7	0.5	3	23	658	678	656	678	0.97
17	25	0.0042	0.29	11.7	2.9	1	23	684	706	684	706	0.98
18	25	0.00018	0.012	16.0	2.5	2	23	944	965	943	965	0.96
19	25	6.6e-06	0.00044	20.5	7.3	1	23	976	998	976	998	0.98
20	25	1.1e-05	0.00072	19.8	2.1	1	23	1004	1026	1004	1026	0.98
21	25	0.00019	0.013	15.9	0.9	1	23	1034	1056	1034	1056	0.97
22	25	0.5	34	5.2	5.2	1	23	1062	1085	1062	1085	0.94
23	25	0.00025	0.017	15.6	2.0	2	23	1215	1236	1214	1236	0.96
24	25	9.4e-06	0.00063	20.0	0.8	1	23	1242	1264	1242	1264	0.98
25	25	0.0013	0.085	13.3	2.1	1	23	1270	1293	1270	1293	0.97

Sequence Information

Coding Sequence: ATGTCGGAGGAAAGTTACCCAATGGACAACATTCCAACTTTTGTTGCACTACCAGTGGACAATTTGGAAAATAACATCCTCCAAAAACCAGAACAATTTAGGATAATCAAAAATGCCATCATCAAGAAATTATCTGATGGTTCGCTATGTCTTATAGACGCAAATGAGGTTAATGATGGGTTGCCACAAGTAACCTATTTGCCCCCTGTCGAAATCACGCCAGTGCCAAGCACCACTCCAGACAAGCCATCAATAACTGTAAATAATGAAGAAACTTCAACTAAACAAACATACAAGTGTTCGAAATGCAAAGAAGTGTTTGAAAAACTTGTTTTATACCGAAAGCATATGATATGGCACCGAAGTATTAAAAAATTTAAATGTGAAAAATGTCCCGCAGGTTACAATGTAGAAACAAATTTAAAGATTCACATGGCCATGCATACTGAAGGAAAACCAACATGTCCAATTTGCCATATTTCATTTCAAAGATTGGCGAGTTTAAAGTCTCACTTGATGTTGCACCAGGTCGAGGAATTGTACACTTGTGAGGAATGTGGGGCTGAATTTGAAAAAGAAGAAGAACTAGAGAAACATTATCATAGTCATTTGGAAAATAATTCCAAAGAAAACAATAATTTAGTTTGTACTTACTGCAGTGTTCAATTGGATGATCATAAAAGTTACAAAGAGCATATTTCTCATCATGTAAAGGTGAAGAAGATGGTCTTGTCGGGCAAAAAAACCCGCAAAACCCACGGCAATAAGGAATATCCTCATGTATGCAACATTTGTTCGAAAAGTTTTTCCCGAGTTTCACTCCTCGAGAGACACTCACGTGTCCACAGTGGCGAAAAACCGTTCGTCTGCCAAATTTGCAATCGAGGTTTCAACCAAAAAGGCACTCTGCAAATTCATTTTAGCAAACATACTGGAATTAAGCCGTTTCACTGTACATTATGTTCAGCGAAATTCAGTCAAAAAGGCAATCTGCGAGTACATGTTGAAAAAACACATACGGCACCTACGCCTGGTGTTAAAATGTACAAATGTTCGCATTGTACTTGCATTTTTAAGAAAATTGCATCGTTGAACGTCCACATTACGAAATTTCATGCGAATAGTGAAGAGTCAACGAGTATTTCGCATGTTATGAGTCGGTTGAAAGAATTGGAACAAGTTACTATGGTGACTCCTGAAGCGGATTCACATAAGGAAGTTTTGAATGAAAATAAAGAATGTGTGGAGAATTCCAACACCAGTTTTGTGAGATTAGCAGAATCTTTTCTTGATGGAACCATTAGACAATATTTAGTTATGCAAAAAAAAGTTAATGATGTTAGATGGTATATTTGTAGTTACTGTGAGAAGGAGTTTAAAAAACCATCGGATCTGATTAGACACACAAGGGTTCATACGAGGGAAAAGCCATTTACGTGTAACAAATGTGGTGCTTCGTTTTCGTTGAAAGCTAGTCTTTTTTCACACATTAAAACTCATGGTGGTAACAATAACTACATTTGTTCTATTTGTATGAAAAAATTTTCTTCGTTTCGGTCCTTCAACGCGCACTTGAGGAGGCATCACGAGAAGTCACAGTATAAATGTTTATCTTGCAACAAGAGTTTTAGTTCTATTCAGAAAGCTAAACTACACAATAGAGAAGTACATAATGAACCATCTAAGAAAGACTCATCGGAAATTTTGCTGAAACAACCTTTAATTAACACTCCTAACGGTTTATTGCCAGTGGCACCACCGAAATCTAATTTGCATCATACAGCAAATACAAAGCAAATCCAGTGTCCGATTTGTTGTGCCAGATTTAGTAAAGTACCCAATTTGAGACGTCATATGTTGCTTCATAACGGCGGGAAGAAATACAAATGTGGTCAGTGTATGAAGTCCTATCATACGGCTCATGCATTAAAGGAACATTCGTTGTATCATTCTGGTATAAAGAATTTCGGCTGTAAAGTGTGTGGAAAGAAATACACGACGGCTTCGTTGTTAAAGAGACATGCCATCAGCCATAGTACGAACAAGCCTTATATTTGCCCATATTGTAGTAAAAATTTCAAAAGTGTTATGTTGTGTCGGAAACATATGAATGTACACAAGAAAGAAATTAACTTACAGATTACTGCTCAGAACAGGACTAATGAAACAAAAAACTTGGATATTTCTGAAAAAACAAAACTACTTGTTTTACCTGATTCGGTTTCAAATCCCGGTTTATTAACAAATAATCAAGATTCCATCGAAAGTAGCACACAAATCGATACCAGTAATCTCCAGTTAGTTACTCTACCAAATGTAAATCAGATAGTGAATCAAATTGATCAACAATTATATGAAGTAACACCAAATTCTATCCAAATAATTACAAACTCTGACAAGGATATTGTGCAAGATCCAAACCAAATCCAAACAATTTTCATTAATTGCGATACTTTGCCACTAACCGATAATTTGTACTCAACGAACACAAATTCAGTGTTGTTTGATCCACTGAATGAACTTCAAGGAACAAATACTTTCAGTATCAATTCTCTCAATGGAGGCTTTCAAACACAAGCCACGGAAACATTTAATCAAGTCGGCAACGATATGCAAACTAATAGCAACTCAACTGATAAAGTCACAAATGATAATCTTCTAACTACCAACATACCGTTATATCCACAGTCGGAACTAAATCTACTGTTCAATCTAGACACTGGATTTGTTTCCAACAATTGTGATTTACCCGATATTAATATCAATGAAGTGCCCGATTTGAATATTGAACTAGCTAAGGAAAATGATGAAGCGAAGAGTCGTCCAATGACATGCGAAAAGTGTAGCAAGGTTTTCAGTAATAAAAAAACGTTTTTGAAACATGTTAGTAGTCACAAAGAAACGAAAAGGGTTGGAAGTGGTTTACACCAATGCAGTTTCTGCGAAAAAAGTTTCAAGAAGCATTCCGATTTGACACGCCACATTCGCACACATACCGGGGAAAAACCTTTCGCTTGTGACAAGTGCGAAAAGAAGTTTTCTTTAAAATCGACTCTGTTGTCGCATCAACGCACACACAACCCGATTAGTCATAAACAGTTTAGTTGTGTCGTTTGTAACTCATTTTTCACTTCGAAATCTAGCCTCAAAGTTCACTTGAGCGTTCATACAGGTGATAAAAGTCATAAATGTAGTTTTTGTTCCGCTAAATTCAGAACGGCTGCTCATCGAAAATCACACGAAAACAATTCTCACTTGAATCCTTCAAAGAAGAAAATGAAAAACAAAGTTACGAACTTACTTGAGTCTGTAGCAATGGATGTTTTAAATCAGTCGGATCAGATTGGTTTACAAAATGAAGAAACAGGGGGCGAATTGGAAAATGTTCTAGTGGTGCAAGAGCCGTTGAATCTTCTGAATGATTCTAATCAGAATCCATTAACCGAAACAACTCAGCTTGAGCCGTTAATTCTGCAACAGTTGCAGTCAAATTTTTTGATGCAATACAATTTAGTTTCATCATCTTTGATTCAGTTAGACGATGGAACAGTTGTTAATTTTAAGACAGTTAATACCGATCAAGAATTGTTACAAGAAACGACCAATCCTATTAGTGTACCAAACGAAAAACCGAGAAATTTGGAATGTGATATTTGTCATAAGAAATATGCGTCGAAAGATGTTTTAAGAAAGCATAAAAAGATCCACGGTATGGATAAAAAATTCAGGTGTACGAAATGTGAAAAGGGATTTGATACGGAGGAAGAGTTGGAGAGACATAAAAGAATCCATGAGGGGTATAGGCCCTATTCGTGTTTTTATTGTGCTAATAGTTTTTCAAAAGAGCGTAATTTAACAACGCATTTAAAAAGGATTCACAATGTTTCTTTCAAAGATAATCTTTTATTATGTGATCTTAAGTAG
Protein Sequence: MSEESYPMDNIPTFVALPVDNLENNILQKPEQFRIIKNAIIKKLSDGSLCLIDANEVNDGLPQVTYLPPVEITPVPSTTPDKPSITVNNEETSTKQTYKCSKCKEVFEKLVLYRKHMIWHRSIKKFKCEKCPAGYNVETNLKIHMAMHTEGKPTCPICHISFQRLASLKSHLMLHQVEELYTCEECGAEFEKEEELEKHYHSHLENNSKENNNLVCTYCSVQLDDHKSYKEHISHHVKVKKMVLSGKKTRKTHGNKEYPHVCNICSKSFSRVSLLERHSRVHSGEKPFVCQICNRGFNQKGTLQIHFSKHTGIKPFHCTLCSAKFSQKGNLRVHVEKTHTAPTPGVKMYKCSHCTCIFKKIASLNVHITKFHANSEESTSISHVMSRLKELEQVTMVTPEADSHKEVLNENKECVENSNTSFVRLAESFLDGTIRQYLVMQKKVNDVRWYICSYCEKEFKKPSDLIRHTRVHTREKPFTCNKCGASFSLKASLFSHIKTHGGNNNYICSICMKKFSSFRSFNAHLRRHHEKSQYKCLSCNKSFSSIQKAKLHNREVHNEPSKKDSSEILLKQPLINTPNGLLPVAPPKSNLHHTANTKQIQCPICCARFSKVPNLRRHMLLHNGGKKYKCGQCMKSYHTAHALKEHSLYHSGIKNFGCKVCGKKYTTASLLKRHAISHSTNKPYICPYCSKNFKSVMLCRKHMNVHKKEINLQITAQNRTNETKNLDISEKTKLLVLPDSVSNPGLLTNNQDSIESSTQIDTSNLQLVTLPNVNQIVNQIDQQLYEVTPNSIQIITNSDKDIVQDPNQIQTIFINCDTLPLTDNLYSTNTNSVLFDPLNELQGTNTFSINSLNGGFQTQATETFNQVGNDMQTNSNSTDKVTNDNLLTTNIPLYPQSELNLLFNLDTGFVSNNCDLPDININEVPDLNIELAKENDEAKSRPMTCEKCSKVFSNKKTFLKHVSSHKETKRVGSGLHQCSFCEKSFKKHSDLTRHIRTHTGEKPFACDKCEKKFSLKSTLLSHQRTHNPISHKQFSCVVCNSFFTSKSSLKVHLSVHTGDKSHKCSFCSAKFRTAAHRKSHENNSHLNPSKKKMKNKVTNLLESVAMDVLNQSDQIGLQNEETGGELENVLVVQEPLNLLNDSNQNPLTETTQLEPLILQQLQSNFLMQYNLVSSSLIQLDDGTVVNFKTVNTDQELLQETTNPISVPNEKPRNLECDICHKKYASKDVLRKHKKIHGMDKKFRCTKCEKGFDTEEELERHKRIHEGYRPYSCFYCANSFSKERNLTTHLKRIHNVSFKDNLLLCDLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01480295;
90% Identity: -
80% Identity: -