Tmad006515.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- lilli
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000020.1:5776441-5784420[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 7.9e-10 6.9e-06 25.5 22.1 409 513 33 153 18 154 0.68 2 6 2 1.7e+04 -6.0 13.9 94 186 196 284 156 333 0.36 3 6 0.3 2.7e+03 -2.8 9.3 436 479 333 372 318 387 0.50 4 6 2 1.7e+04 -18.8 34.1 80 234 339 489 333 521 0.29 5 6 0.11 9.5e+02 -1.3 14.5 123 196 658 720 622 796 0.41 6 6 0.29 2.5e+03 -2.7 0.5 454 454 906 906 838 976 0.56
Sequence Information
- Coding Sequence
- ATGGGTCTACGGTACCGTCCTGGTTTTCTTTGTTTCCGTCGGTTCGAGGCTTCTTCCGCCGAGCGCGGGTTGTTGACACAACATGTCGCCGATGGCGGTCACACTGATAGTGACTTACGAGATGATCTAAATCTGTCAGATGACAGCGATGATGATCAAAAGCAATCTTCCAAGTTACCAGTAGAAAAAATGGTTTCTCCATTGGGGGCGACTCCGGCCGTTAGTAATTTTTCCAAAATGGACTATCCTCCGGAACCGGCCAATCCGGCTGGATCTTCGTCAAGTGATTCTGGTTCGGATTCTGGATCGGAGAGTGATTCGAGCAGTGACGATTCTGCCGAAGACAACGTCTCTTCATCGAATCCAAGTAAATCAAACGTACCTGCTGAGAGTGGACCCTCTTCGCCGCCGCCGCCTGAAGAAAAAGATAAGAAGAGATGGAACCTCGGTTCGTATTTGGTCATCGATCAGAACAACGCCAAGGCGGATTCCGTTCTTTCACCGAAAGTACAAACGTCGCCGCTCACCTCCAGTATGCTCCCTTTGGCCGTCGACAAGAAAAAAGTTACCGAAGAATCAGACGCCAGTGATTCGACGAAAGATTTAGACAGTGTTGTTGCCGAAGCGCTTGCATCGGCAACGGTGCCTCTTTTGTCGAGTTTCTCCGATTCGGATGATAGTGTGACGGAAAGACGCATGAAAAGACGCAAACATACCATACAATCAGTTACCAAAAATTCGGAAAGTGACAGTGACGATACTGAACGGACGAAAAAACCTAAACCGGTGCGTCGTGCCAGTCCTCGGACTAAATCAGTGGATTCGTGTAGTGATTCGGACAATAACAGTGCCAATATTATCAAAAAACGTCTATCACCTTTGCCTCATAAATCACCCGAACAATTAGTCAAACCGAAACAGAGTCGCGGACGTCCCAGAAAAATTAAACCGGCTGTGAGTGGATCCGAAAAGAAACCACGAAAAAGAGGACGACCACCGAAACCTCGACCATCACATCCGAGCAGTTCTGATGAAGAAGACAACGTCGAAAAAAGACCGGCGAGAAGAAGAACCATCTCGAAACGTGACGCTTCGAGTAGTTCCGATTCGGATTCGAGGTATCGAAAATACGAATCACCAAAGAAAATCCCTAAACCATTCGAGGATAAAATCAAAAGGCCCATCAAAAACGATTCGGATGACGATTGGGGCAAAAAGAACAAAAACAAACTTAAACAAAGACAAAGGAGCGAATCGGAAAGTTCGAAAAAGAACGACTCTCCCAAGAAAGAGGTCTTCAGGAGGAAAGGAAGAACGACAAATTCACATCACAAAAGCGCCGCAACTCTTCCCACAACCACTGATTCGAGTGATAGTGATTCGGGCCCTTCCAAGCGTTTACAACGAAGTCTGAGTTCTAGAAGTCGAAGTCGGTCATCGGACACTGACAACAACATTTTAACCAAATCTCCGATTAATAAAGTCGAGGAAACTAAACCGATCAAAGACAAAAACAAGAGTGATACTTTACGCAAGTTATTCACTCCGAAAAGAGATTCGGAGGGTGGCAAAGGAGGTGGTAAAGGCGGCGGCAAGGGCGGAAAAGGCGGCAAAGGCAAAGGTGGTGTCAATGTGATATTCGCCGACGGTGGCAATGAACGCTGCAGTTCACCCGTCGAAGATGAAACAATGCCGACCATATCAAACCCTACTCTTTTATCACCAATTCCTAACAAGGATGTTAAACCCCCACTATCATCCCCTTGTACCGAACCAATCAAATTCATAAAGACTGAGCCTATCGATGACGAGAAAAACTCGATGAAAGTGAAAATCGGTCTTAGTCGCATCGACTTGAACGCTGTGATTTGTTTGAGGAACAAACTCGAAGCATTAAAGCATCCTTACTTGAGAGAGTTTGAAAAGAAGAAACTGAGCGATAATGAAAGTAAGAAGAAAGACTCTGATTTGGTCGAATTGAAACACAAATCGAAAAAACGAAAGAGACGAAATAGCTCGAGTTCGATTTCGTCATTGTCGACTGTCAGTAACATGTCGCAGAGTAGCAAGAAATTGGAACATAGGAAGGACAGGGAGAATCATAAGTTGAAACGGCGAAAAGAAGAAGAAATTTATCCCAGATCACAAAGTGATAATATCAGTCTGACAAATGCACCACCTACCAATCACGAACGGGAAGGTAGCAGAAGTCGACAGGTGATTTCACCAATTGACAAAAACAAGTCGCAAAGTACCAGGGAGTATTATTCGTACTTTGAGAAGCCCGACGAGCCCCTAGAGTGCGAAGAAAGAGCTCAAAGTCAGTACCTGAGCGATGCGACTCGTTTGAAGCACTTAGCTGATAAAGAGACTGATACAACAAAACAGTGTATGCTGTACCTGGAGGCTGTACTTTACTTCTTACTAACGGGCAACGCCATGGAACACACGAGGGTTACAGAAAACGCCTGTTTCACAATGTATAAAGACACATTATCGTTAATAAGGTACATCACTTCGAAATTTCGAAGCCAACATAACGCGTCTTCGAAGCACAATAAGCTCGCTGTGTTAAGTTATCGGTGCCAAGCGCTTCTTTATTATAAACTATTCAAGATGAAGAAGTACGAAGCGAAAGACTACCAGAAGGTTCTTAGCGAATATTTTAATAACAAGGCCGTCGCGATACCTCCAGAGCAGCAGAACCAACAGGGTCAGGGTACGCCGTCACCCATGTCCCCGACGCCGTCTCCTGCCGGTTCAGTGGGTTCGGTGGGCAGCCAGTCGTCGGGTTATAGCAGTGGTGAGTTGGCGGCGAGAGGTAGCAATGTGCCGCCGCCTGTCCCGTCGACGCACGCACAAAGTGGGGGTGCTCACGTCTGGATTCCTCAGAACATTTACAATGCCATGTACAAGCAGAACCAGAATTTCACATATCTTCTGTCTTGTCAGGATCTGTGGGACACGGCCGATGCTCTCGTCATCAAGGGTAAACACACAGATTTCTTTATCGACTTGGATAGGCTGTGCAAGCCTTTGACGATGCACAGCTCGCTGATAGACCTAGTGAGGTACATTCGCGAAGGGATTAAAAGGTTGAACGAGAGTTAG
- Protein Sequence
- MGLRYRPGFLCFRRFEASSAERGLLTQHVADGGHTDSDLRDDLNLSDDSDDDQKQSSKLPVEKMVSPLGATPAVSNFSKMDYPPEPANPAGSSSSDSGSDSGSESDSSSDDSAEDNVSSSNPSKSNVPAESGPSSPPPPEEKDKKRWNLGSYLVIDQNNAKADSVLSPKVQTSPLTSSMLPLAVDKKKVTEESDASDSTKDLDSVVAEALASATVPLLSSFSDSDDSVTERRMKRRKHTIQSVTKNSESDSDDTERTKKPKPVRRASPRTKSVDSCSDSDNNSANIIKKRLSPLPHKSPEQLVKPKQSRGRPRKIKPAVSGSEKKPRKRGRPPKPRPSHPSSSDEEDNVEKRPARRRTISKRDASSSSDSDSRYRKYESPKKIPKPFEDKIKRPIKNDSDDDWGKKNKNKLKQRQRSESESSKKNDSPKKEVFRRKGRTTNSHHKSAATLPTTTDSSDSDSGPSKRLQRSLSSRSRSRSSDTDNNILTKSPINKVEETKPIKDKNKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVNVIFADGGNERCSSPVEDETMPTISNPTLLSPIPNKDVKPPLSSPCTEPIKFIKTEPIDDEKNSMKVKIGLSRIDLNAVICLRNKLEALKHPYLREFEKKKLSDNESKKKDSDLVELKHKSKKRKRRNSSSSISSLSTVSNMSQSSKKLEHRKDRENHKLKRRKEEEIYPRSQSDNISLTNAPPTNHEREGSRSRQVISPIDKNKSQSTREYYSYFEKPDEPLECEERAQSQYLSDATRLKHLADKETDTTKQCMLYLEAVLYFLLTGNAMEHTRVTENACFTMYKDTLSLIRYITSKFRSQHNASSKHNKLAVLSYRCQALLYYKLFKMKKYEAKDYQKVLSEYFNNKAVAIPPEQQNQQGQGTPSPMSPTPSPAGSVGSVGSQSSGYSSGELAARGSNVPPPVPSTHAQSGGAHVWIPQNIYNAMYKQNQNFTYLLSCQDLWDTADALVIKGKHTDFFIDLDRLCKPLTMHSSLIDLVRYIREGIKRLNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -