Tmad009661.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- kn
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000003.1:8559807-8569067[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-129 6.5e-125 417.6 15.5 210 562 108 445 102 452 0.85
Sequence Information
- Coding Sequence
- ATGAAGCCATTATTCGCCGATAGACGCGCTTCTTACGAATATAAGACGGAAAACCGGACTGAATTGCTGACGAGGTCCGGCTCAACCTACCTCACAACACATACGAGGCGCCTCCAAAAGTCCACAGCTGAAAGCTCTACCCGCATTGGGAACTTTCAAACTAGAGTACGTGGCGATGGTCGATGGCCGTATTTCAAGCAGCGTATCGAACGCCGCCTACTGGCCGCTCCGCCGTCATCATCCTGTGGTTCCCATGGGAACGCGTGTGTATCGCAGGGGTGCGGGGTCCCTTGGGAGAGCGCGAGCGTTCCCGAGGGAGGAGTCGTCATAGCGACGCAGGTGTCCGTCGATGGACCTCTGCTCGCCATCTCCGACAACATGTTCGTACACAACAACTCCAAGCACGGCAGAAGGGCGAAAAGGCTCGATCCTACCGAAGGTCAATTTCCAGGCCTCTACCCACCGCTGCCCGTGGCCACCCCCTGCATAAAGGCCATAAGTCCGAGCGAGGGATGGACGTCAGGCGGATCGACTGTTATCATAGTCGGAGATAATTTCTTCGATGGTCTTCAAGTGGTTTTTGGAACGATGTTAGTTTGGAGCGAATTGATAACACCCCACGCTATTCGAGTTCAAACACCCCCAAGACATATTCCAGGAGTGGTCGAGGTCACATTATCATATAAATCAAAACAATTCTGTAAAGGAGCACCAGGCAGATTCGTCTATGTTTCCTTAAACGAACCAACGATAGACTACGGATTTCAGAGGCTACAAAAGCTCATACCGAGGCATCCGGGAGATCCAGAAAAGTTACCAAAGGAAATTATTCTAAAAAGAGCAGCGGACTTAGCTGAAGCACTCTACACAATGCCAAGAAATAATCAATTGTCATTATCAGCGCCAAGGTCACCGACGATGGCAAATAACGGAATGACGTCCACTTTCAATACGTATACGGGGCAACTGGCTGTCAGCGTTCAGGACAACGGAAACGGTCAGTGGACAGAAGAGGAGTACGGGAGGGCGCAAAGTAGCAGCGTCTCGCCGCGTGGTGGAGGCTACTGTTCGAGCGCGTCAACCCCCCATTCGTCCAACGGAGGCTCTTATGGAGGCAACATGAACGGATACGGGGGCGCGACCCCCACAAGTAGCGCGCAACTGTCCAACATGCTGCCCAGTTCGCCTTCGGCCGGAATTTTCAATTCCACCCCAATTGCAACCGAGGCGGGTCATTATCATTTTGGCGCACACAACAGTAAAGCGGCGGCAGCGTCGGATAAAGAGAAAAGCGCGTTTGCCCCTGTGATACGGGGGAGTGTGACTCCCCCAACTCACCCCCCGGCACCCGCGCTTTTCCACCACCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAGTGTTAG
- Protein Sequence
- MKPLFADRRASYEYKTENRTELLTRSGSTYLTTHTRRLQKSTAESSTRIGNFQTRVRGDGRWPYFKQRIERRLLAAPPSSSCGSHGNACVSQGCGVPWESASVPEGGVVIATQVSVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLSAPRSPTMANNGMTSTFNTYTGQLAVSVQDNGNGQWTEEEYGRAQSSSVSPRGGGYCSSASTPHSSNGGSYGGNMNGYGGATPTSSAQLSNMLPSSPSAGIFNSTPIATEAGHYHFGAHNSKAAAASDKEKSAFAPVIRGSVTPPTHPPAPALFHHQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01311300; iTF_01409738; iTF_01480590; iTF_01311347; iTF_01567614; iTF_00639320; iTF_00639267; iTF_01310112; iTF_01310063; iTF_00165854;
- 90% Identity
- iTF_01480590;
- 80% Identity
- iTF_01480590;