Rfun009267.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- kn
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000006.1:18594144-18618796[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-127 4e-123 413.6 15.1 209 565 59 400 42 407 0.86
Sequence Information
- Coding Sequence
- ATGGTCGATGGCCGTATTTCAAGTAGTATATCGAACGCCGCCGCCGCCTACTGGCCGCTTTGCCGTCATCATCCTACCGTCCCCATGGGAACGCGTGTGTTCGGCAGCGGGGGGAAAGGGTCCCCCGGGAACGCGTACGTCCCTAGGGAGGAGTCTGTCTTGCAATGCACTTCCGCAgTAGTTATTTGTACTCAAGTAGCTGTGGATGGACCTCTTCTGGCTATTTCTGACAACATGTTCGTTCACAATAATTCCAAACATGGCAGAAGAGCAAAACGACTGGACCCCACTGAAGGTCAATTTCCAGGACTATACCCGCCCCTACCTGTAGCCACCCCTTGTATAAAAGCAATCAGCCCCAGCGAAGGGTGGACGGCGGGAGGATCGACAGTTATTATAGTTGGAGATAACTTCTTTGACGGACTACAAGTTGTTTTCGGAACGATGTTGGTGTGGAGTGAGTTAATAACTCCTCATGCAATACGTGTCCAAACGCCACCGCGGCATATACCGGGAGTTGTAGAAGTAACACTTTCATACAAGTCCAAGCAGTTTTGTAAAGGTGCACCTGGACGATTTGTATACGTCTCCCTTAATGAACCAACGATAGACTATGGATTTCAAAGGTTACAGAGACTCATACCAAGACATCCAGGTGATCCAGAGAAGCTTTCAAAGGAAATAATACTGAAAAGAGCTGCCGATCTGGCTGAGGCTTTGTATTCGATGCCCCGCAATAACCAACTATCCTTATCAGCACCCAGATCCCCCACAATGGCCAACAATGGGATGACGTCAACGTTCAACGCATACACTGGTCAGCTGGCTGTCAGCGTTCAAGACAACGGAAACGGTCAGTGGACAGAAGAGGATTACGGGAGGACGCAAAGTAGCAGCGTGTCGCCAAGGGGTGGGGGATACTGTTCCAATGCGTCCACTCCCCACTCTTCTAACGGCGGTTCGTACGGCAGCAACATGAATGGATACGGAGGTGCAACGCCGACAAGCACTTCACAACTTTCCAACATGTTGCCTAGTTCCCCGTCGGCAGGAATTTTTAACACAACTCCACttactACTGAAGCAAACCATTATCATTTTGGCACAACCTACCCTAAACCGGCTTCAACGGACAAAGAGAAAAGTGCTTTTGCACCCGTAGTAAGGGGGAGTGAGACGTCTCCGTCGCACACCCCCACACCTGCGTTATTCCACCATCAGCCAGTTACAGGTTGGCACCACTTGGCTGTGCAgtgttag
- Protein Sequence
- MVDGRISSSISNAAAAYWPLCRHHPTVPMGTRVFGSGGKGSPGNAYVPREESVLQCTSAVVICTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQRLIPRHPGDPEKLSKEIILKRAADLAEALYSMPRNNQLSLSAPRSPTMANNGMTSTFNAYTGQLAVSVQDNGNGQWTEEDYGRTQSSSVSPRGGGYCSNASTPHSSNGGSYGSNMNGYGGATPTSTSQLSNMLPSSPSAGIFNTTPLTTEANHYHFGTTYPKPASTDKEKSAFAPVVRGSETSPSHTPTPALFHHQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480642;
- 90% Identity
- iTF_01310063; iTF_00165854; iTF_01014036; iTF_01162874; iTF_01162822;
- 80% Identity
- iTF_01310063;