Tmad017322.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- ATFC_1
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000097.1:13945483-13949452[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8 4e+03 -2.1 0.2 14 26 232 244 232 246 0.82 2 2 3e-13 2.5e-10 40.2 7.0 2 63 250 311 249 313 0.95
Sequence Information
- Coding Sequence
- ATGAGTTGTACGCCGTTCATCATCGAAAAGGAAGAGCCATTGTCACCTCTCAGTAGTGAAGAGGTGTCATGGCTCTCCGACGACACATTCTATCAAACACCAACGGACCACGAAAACATCAAATTCGAACATGATTTTGTCCCTTGTTGCGAAACGAAAGCGGAAGTCGCCTCGCTCATGCTTGAAAACCTCGAAAATTTGATCAATCTGGACGAACTCATCAAGGAGGAACCATCATTCCTCCTCGACGAGAAAATCCTCCCAAATATTCTGGACGATGTGGACCAAACCCGTGTTATACTCCCCCCACCTCCTACAAAATTGGAGTACGTCACCAATACCGACACCCAATTCCTGCTCAAAGAATTCGAGAATGTCTATGACGTTGTTGAACTCACCCATGAAACTCTCACCCCGCCTCAGAGCCCCCCTCATGAATATAAAATCCTGACGACTTTGGAGCCGCTCCTCCAGAGTGAGAAAGCACCCCTTTTGGCGTACCCCACGGTGATGACGCCCCAGCCCGACATCGCGCACGAGTTGGCCGTTGTTGACGAGTTGGTGCGCACCCGCGTGGAGGACATGCAATGGAGCAGTGGCCCCTCGTCGCCGAGCGGAAGTAGCAATTTCGGGGATTGCTCCTCGGATGACCCCGAATGGATGCCCGAGCCGGTGGAGAACTACGATGGAGTTGTCTCGCCGAAGCAAGGAAGGAAGAGGGCGAAGCCCTATTCGCGTACCTCGCCCGTTGATAAAAAATCAAGGAAGAAGGAGCAAAATAAGAATGCTGCGACGAGGTACCGTATGAAGAAGAAAGCCGAAGTCGAGGTGATTCTATCAGAAGAGAAGCAATTGACCATGAAGAATGAAGAGTTGGATACGAAGATTAACGATCTTCAACGGGAAATCAAGTACTTGAAGGGGCTCATGCGCGATCTATTTAAAGCAAAGGGACTTATCAACTAA
- Protein Sequence
- MSCTPFIIEKEEPLSPLSSEEVSWLSDDTFYQTPTDHENIKFEHDFVPCCETKAEVASLMLENLENLINLDELIKEEPSFLLDEKILPNILDDVDQTRVILPPPPTKLEYVTNTDTQFLLKEFENVYDVVELTHETLTPPQSPPHEYKILTTLEPLLQSEKAPLLAYPTVMTPQPDIAHELAVVDELVRTRVEDMQWSSGPSSPSGSSNFGDCSSDDPEWMPEPVENYDGVVSPKQGRKRAKPYSRTSPVDKKSRKKEQNKNAATRYRMKKKAEVEVILSEEKQLTMKNEELDTKINDLQREIKYLKGLMRDLFKAKGLIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479879;
- 90% Identity
- -
- 80% Identity
- -