Tcas000830.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- ATFC
- Assembly
- GCA_000002335.3
- Location
- NC:10814699-10824829[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8 3e+03 -2.2 0.7 15 26 230 241 229 243 0.81 2 2 5.5e-13 3.5e-10 39.2 7.2 2 63 247 308 246 310 0.95
Sequence Information
- Coding Sequence
- ATGAGTTGTGCGCCGTTCATTATATGGAAGGAAGAGCCATTGTCACCTCTCAGCAATGAAGAGGTGTCATGGCTCTCAGATGACACTTTTTATCAAACATCAACGGAGCACGAACACATCAAATTCGAAGATGATTTGGTCCCTTGCGAATCAAAGGCGGAAGTGGCCTCTCTCATGCTCGAAAATCTGGAAAATCTTATCAATTTGGACGAACTCATCAAGGAAGAACCATCATTCCTCCTCGACGAGAAAATCCTCCCCAACATTCTGGACGATGTGGACCAAGCCCGTGCCATACTCCCCCCACCTCCCACAAAGCTCGAGTACGTCCCCAACACCGACACCCAGTTCCTCCTCAAAGAGTTCGAAAATGTCTACGACGTGGTCGAACTCACCCACGAGACCCTCACTCCGCCTCAGAGCCCCCCGCACGACTACAAGATCCTCACCACTCTGGAGCCGCTCCTCCAGCTCCCCGTTGTACCTGAAAAGCTGGCGTACCCCACGGCGATGACGCCGCAGCCCGACATCGCCCACGAGCTGGCCGTCGTCGACGAGCTGGTGCGCACCCGCGTGGAGGACATGCAGTGGAGCAGCGGGCCGTCTTCGCCCAACAGCAGCGACTGCTCGTCGGACGACCCCGAGTGGATGCCTGAGCCGGTGGAGAGCTACGACGGAAGCGCCTCGTCTCCGAAGCAAGCGCGGAAGCGGGCAAAGCCCTACTCGCGCACCTCGCCCGTGGATAAGAAGTCGCGGAAGAAGGAGCAGAATAAGAACGCAGCTACGAGGTATCGCATGAAGAAGAAAGCCGAAGTCGAGGTGATTCTGTCGGAGGAGAAGCAGCTGTCCATGAAGAACGAGGAGTTGGATGCGAAGATTAACGATCTTCAGCGGGAAATCAAGTACTTGAAGGGGCTCATGCGTGATCTCTTCAAAGCAAAGGGACTTATCAACTAA
- Protein Sequence
- MSCAPFIIWKEEPLSPLSNEEVSWLSDDTFYQTSTEHEHIKFEDDLVPCESKAEVASLMLENLENLINLDELIKEEPSFLLDEKILPNILDDVDQARAILPPPPTKLEYVPNTDTQFLLKEFENVYDVVELTHETLTPPQSPPHDYKILTTLEPLLQLPVVPEKLAYPTAMTPQPDIAHELAVVDELVRTRVEDMQWSSGPSSPNSSDCSSDDPEWMPEPVESYDGSASSPKQARKRAKPYSRTSPVDKKSRKKEQNKNAATRYRMKKKAEVEVILSEEKQLSMKNEELDAKINDLQREIKYLKGLMRDLFKAKGLIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480610;
- 90% Identity
- -
- 80% Identity
- -