Tcas004263.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- pnr
- Assembly
- GCA_000002335.3
- Location
- NC:7600454-7629888[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-18 5.3e-15 54.2 3.2 1 34 125 157 125 159 0.97 2 2 1.8e-19 3.8e-16 57.9 5.8 1 35 179 212 179 213 0.98
Sequence Information
- Coding Sequence
- ATGTTCCATACAAGCGGTGGTGGTGGAGGATACAGCGACGGCAACGCGGGTTTCCACCAGCATCTGCAGCAATCTCCCGTTTACGTTCCAAGCAGTAGAGCAGTGCCCCAGTATCCTTCTCCTGCGAGTGGGCATTTCGGGGCTGCTGCTCACCAGAGTAGTTGGGCTCACGCTGGTGGAACGTACGGCGAAATGGCAGCCCCATCTGCACACAGCTTGGGGACTTCGCCACATGCTGGTGCTTTATCAGCTGGGCAGTTTTATGCCCAGAATATGATGATGAGCTCGTGGAGAGCCTACGATGGGACTGGATTTCAAAGGACGTCTCCGTATGACGGAAGCATGGAGTTTCAGTTCGGCGAGGGGCGCGAGTGTGTAAACTGCGGCGCCATTTCGACGCCGCTATGGCGTCGCGACGGCACGGGCCATTATTTGTGCAATGCTTGTGGGCTTTACCACAAAATGAACGGCATGAACCGACCACTAATAAAACCATCAAAACGATTGACGGCGACCCGGAGATTAGGGCTGTGCTGCACGAACTGTGGGACGCGGACGACGACATTATGGCGTCGGAACAACGACGGAGAACCTGTTTGTAACGCCTGCGGATTATACTTCAAATTACACGGCGTGAACCGGCCTTTAGCCATGAGGAAGGACGGCATACAAACACGCAAACGCAAACCGAAGAAGCCTGTTGGCGGGGAACGTGATGATAGCAGCTCCGCCTCCGTTGAAGAAACAAAATCTCTCGTTCACCAATCCTCGCAACAACACTCGTCGCAATCTCAATCGCAAACCCATCACAACCATCAGCTCGACAAATCATCGCCGGTGGAGCGCCCATATCTGGGCCAAACCTCCCTCTTACCTGCCACAAGTACAAGTGCCATCAAAAGCGAGCCCGGGTACGAATACAGCTGCATACAGAACCAGCCGTCGTATCCTTACCAACAAATATTTGGGTTTCCTGGTTCGGCCAACAGCAGCGGGGAGGTTGCCTACCACCACCAACACCACGTTACTGCCGCCGCCAAACTAATGGCCTCGTCTTAG
- Protein Sequence
- MFHTSGGGGGYSDGNAGFHQHLQQSPVYVPSSRAVPQYPSPASGHFGAAAHQSSWAHAGGTYGEMAAPSAHSLGTSPHAGALSAGQFYAQNMMMSSWRAYDGTGFQRTSPYDGSMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPVGGERDDSSSASVEETKSLVHQSSQQHSSQSQSQTHHNHQLDKSSPVERPYLGQTSLLPATSTSAIKSEPGYEYSCIQNQPSYPYQQIFGFPGSANSSGEVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01481349; iTF_01311912; iTF_01330254; iTF_00423412; iTF_01443508; iTF_00870968; iTF_00415563; iTF_00753474; iTF_00639956; iTF_00647673; iTF_00853628; iTF_00395965; iTF_01278941; iTF_00168062; iTF_01410448; iTF_01163615;
- 90% Identity
- iTF_01481349; iTF_00415563; iTF_00753474; iTF_00639956; iTF_01330254; iTF_01410448; iTF_00870968; iTF_00168062;
- 80% Identity
- -