Lhir017809.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- pnr
- Assembly
- GCA_947359425.1
- Location
- OX375794.1:8436724-8463287[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-18 1.3e-14 54.2 3.2 1 34 124 156 124 158 0.97 2 2 4.4e-19 1.9e-15 56.9 6.2 1 35 178 211 178 212 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACTCAGGTGGAGGTGGTGGAGCATACAGCGACAGCAACACGAGTTTCCATCAGCATCTGCAACAGTCTCCTGTTTACGTACCCAGTAGCAGAGCAGTACCCCAATATCCATCTGCGGCGAGTAGTCATTTTGGGGCTGCTGCCCATCAAACAAGTTGGCCCCACACCAGCGGAGCTTACGGGGAAATGGCTCCGTCTTCAGCCCACGCACTAGGTGCCTCACCACATCCTCAAGCTTTATCGGCCGGGCAGTTCTATGCTCAATACTCCATGAGCTCGTGGCGGGCCTACGATGGATCGGGATTTCAAAGAGCCCCACCTTACGATGGACCCATGGAGTTTCAGTTCGGGGAAGGACGAGAGTGTGTGAACTGTGGGGCTATTTCTACACCGTTATGGCGACGAGACGGCACTGGACATTATTTGTGCAACGCTTGTGGGCTGTATCACAAAATGAATGGAATGAATAGACCTTTAATAAAACCCTCAAAACGATTGACTGCTACTAGAAGATTAGGGCTGTGCTGTACAAATTGTGGGACACGAACGACGACACTTTGGCGTCGCAACAATGAAGGCGAACCGGTTTGTAACGCCTGCGGTTTATATTTTAAGTTACACGGTGTGAATCGTCCTTTAGCAATGAGGAAGGATGGAATCCAAACACGCAAGCGCAAACCGAAAAAACCAGTTGGAGGAGAGCGTGATGAGAATAACTCCGCCCCAGTTGAAGAAACCAAAAGTTCCATTCACCAATCTTCCCAGCAGCATTCGGCGCCCCCTCAACAAACACCAAACCACCACAACCATCAAATAGAAAAATCACCAACAGAACGGCCCTACCTGGGCCAAACTTCCCTAATTCCCGCCACAAGTACAAGTGCCATAAAAAGTGAGCCTGGTTATGAGTACAGTTGTATACAGAACCAGCCTTCGTACCCTTACCAGCAAATTTTCGGGTTTCCATCTTCAGCAAGCAGTAGCAACGAGGTCGCTTATCACCACCAGACACATGTCACAGCTGCTGCCAAACTCATGGCCTCATCTTAG
- Protein Sequence
- MFHSGGGGGAYSDSNTSFHQHLQQSPVYVPSSRAVPQYPSAASSHFGAAAHQTSWPHTSGAYGEMAPSSAHALGASPHPQALSAGQFYAQYSMSSWRAYDGSGFQRAPPYDGPMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPVGGERDENNSAPVEETKSSIHQSSQQHSAPPQQTPNHHNHQIEKSPTERPYLGQTSLIPATSTSAIKSEPGYEYSCIQNQPSYPYQQIFGFPSSASSSNEVAYHHQTHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480526;
- 90% Identity
- -
- 80% Identity
- -