Tcas006482.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- RCOR3
- Assembly
- GCA_000002335.3
- Location
- NC:5988754-5994835[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-09 1.4e-06 27.8 0.0 3 46 129 172 127 172 0.97 2 3 2 1.5e+03 -1.1 0.8 36 44 269 277 269 278 0.88 3 3 2.4e-14 1.9e-11 43.4 0.0 3 46 376 419 375 419 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTAGCCGAAAAAAACAGTGAAAATGCCCGAAACGGTCGGAGTCGAGGACCGAGTCCCAATGGTCACGTTCAAGACTCCACAAGCGAGGATGAAAGCTCAGTTCCAGTAGATAAGATTCGAGTTGGGCGAGACTACCAGGCCATTTGCCCCGAACTTCAGCCGGAATCGCAGCGAAAACCCGAATTATTGGCCGATCGAGCGCTACTTGTATGGTCACCAACTGAGTCCATCCCCGAGTCAAAGCTGGAGGATTACATAGTTTTAGCCAAAGACAAGTACGGTTACAACGGGGAGCAGGCGCTTGGGATGCTCTTTTGGCACAAGCATGATTTAGACCGGGCGGTGCTGGACTTGGCGAACTTCACCCCCTTCCCCGACGAGTGGTCGGTCGAAGACAAGGTGCTGTTCGAGCAGGCGTTTCAGTTCCACGGCAAAAGCTTTCATAGGATAAGACAAATGTTGCCAGATAAAAGTATTGCAAGTTTAGTCAAGTATTACTACAGTTGGAAAAAGACAAGGTCTAGGACCAGCCTCATGGACAAGCAGGCACGTAAGTTGAACACCCCCAAGGAGGAAGGGGGCGCTTCAGAGGCCGGCTCAGAGGGAGGATCCAACGAGGAATCAGACCATGACGATAAGAAATGGACAATACATCGTGGCATTCGTCGTAAAAGCGGTTCACCAAGTCGTACGGGTCAACCTCCCGACGAGAACGCTACTCAGGGTGAGGGTGGCGCGTGCTCTAACTGCGGAGTCGCCTGTACCGTCACTCAAGTGACGTCCAAGGGGTCCCTCTGTAATTCCTGCTACCAACACTGGAGACGAACGGGATTGTTGCGGCCCACATCGGGGCCCACGGGTGGCAAGCGCGGGTCCCCACTGGGCGGACGCCACAAGCGCAAGCCCCCTCGCGGCATGTACATCAACCACGACGATCTGGCTGCGATGGCGTCAGGCAACGCGGGTGTGCTCATGCTTAAGGCGATGGATCGAGAATTAGATTCCCTCCAAAGACAAATCCAGCAGAACAAGCAGAATATAAGTTCCTTAAAGCGCAAGCATGCAGACTCCATTGAAGATCTCCGTCCAACAAATGACAATTCGTCTCGTATTAACGCCCGCTGGACAAACGAGGAATTGCTCTTGGCTGTCCAAGGCGTGCGTAAGTACGGCAAAGACTTTAAAAGCATCGCCGAAGTATTGGGTAACAAAACTGAACACCATGTGCGTACGTTTTTCGTTAATTACCGTAAAAGATATAATTTAGACAATGTTCTAAAAGACTGGGAAAAAGATAATGGGCCTTTGCCTGAAGATAACGGCGACGTTAAAGTCGAATTGGACGATTCCAACAATGATAACGATGTTATTTGTATATCACCGACCCCAAAAAAAGAAATGAAAAACGGGAAAGTCACTCAAGCTAGTAAATGA
- Protein Sequence
- MVLAEKNSENARNGRSRGPSPNGHVQDSTSEDESSVPVDKIRVGRDYQAICPELQPESQRKPELLADRALLVWSPTESIPESKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKEEGGASEAGSEGGSNEESDHDDKKWTIHRGIRRKSGSPSRTGQPPDENATQGEGGACSNCGVACTVTQVTSKGSLCNSCYQHWRRTGLLRPTSGPTGGKRGSPLGGRHKRKPPRGMYINHDDLAAMASGNAGVLMLKAMDRELDSLQRQIQQNKQNISSLKRKHADSIEDLRPTNDNSSRINARWTNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVRTFFVNYRKRYNLDNVLKDWEKDNGPLPEDNGDVKVELDDSNNDNDVICISPTPKKEMKNGKVTQASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566170;
- 90% Identity
- iTF_00852610;
- 80% Identity
- -