Lhir026325.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- rcor2
- Assembly
- GCA_947359425.1
- Location
- OX375797.1:22220502-22228122[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-09 4.7e-06 27.3 0.0 3 46 129 172 127 172 0.96 2 3 2.4 3.8e+03 -1.2 0.8 36 44 270 278 270 279 0.88 3 3 9.8e-15 1.6e-11 44.9 0.0 3 46 377 420 376 420 0.98
Sequence Information
- Coding Sequence
- ATGGTGTTAGCTGAGAAAAATAGTGAGAATGCTCGGAACGGCCGAAGAAGTCGAGGGCCAAGTCCCAATGGTCATGCACAAGACTCTGGTAGTGAAGAGGAAATTGTTCCAGTTGATAAAATCCGGGTTGGAAGAGACTACCAGGCGATTTGTCCCGAACTCCAACCAGAAGCCCAAAGAAAACCTGAACTTTTGGCCGATAGAGCCCTGCTCGTATGGTCCCCAACGGAATCCATTCCAGAATCGAAGCTGGAAGATTACATAATTTTGGCCAAAGACAAGTATGGATATAATGGAGAACAAGCTCTTGGAATGCTTTTTTGGCACAAACACGATCTCGACAGAGCCGTTTTAGATTTAGCAAATTTCACACCATTTCCGGATGATTGGTCTGTTGAGGATAAAGTACTCTTTGAACAAGCATTTCAGTTTCACGGGAAAAGTTTTCATCGGATACGACAAATGCTTCCAGATAAAAGTATAGCGAGTCTAGTGAAATATTACTACAGTTGGAAAAAGACACGATCGCGGACTAGTTTAATGGACAAGCAGGCACGTAAGTTGAATACTCCAAAAGAGGAAGGGGGTGCTTCGGAAGCAGGTTCTGAAGGTGGTGGCTCAAACGAAGAATCTGATCATGATGAAAAGAAATGGACAATACATCGTGGCATTCGTCGTAAAAGCGGTTCACCAAGTCGTACGGGTCAACATCCCGACGAGAACGCTACCCAGGGTGAGGGTGGAGCGTGCTCTAACTGCGGAGTCGCCTGTACGGTCACTCATGTGACTTCCAGAGGATCCCTATGTAATTCCTGCTACCAGCATTGGAGACGAACGGGATTGTTGCGGCCTACATCGGGGCCCACGGGTGGTAAGCGCGGGTCCCCACTTGGAGGACGCCACAAGCGCAAGCCTCCTCGAGGCATGTACATCAACCACGACGATTTGGCAGCTATGGCGTCGGGCAGCGCTGGTGGTCTAATGCTTAAGGCTATGGATAGAGAATTAGATTCCCTTCAACGACAAATCCAACAAAACAAACAAAATCTAAGTTCCTTAAAACGCAAACACTCTGACTCAATCGAAGATCTCCGTCCATCAAATGACAACTCAACTCGCATTAACGCACGTTGGACAAACGAAGAACTACTATTAGCAATACAGGGCGTTCGTAAATATGGTAAAGACTTTAAAAGTATTGCTGAAGTTTTGGGTAATAAGACCGAACAGCATGTTCGGCAATTTTTTGTGAACTATCGGAAACGTTATAATTTAGACAATGTGTTGAAAGACTGGGAAAACGATAATGGACCGATACCGGTTGACGATAATAATGGCGAAATTAAGATGGATTTGGATGACTCAAATAATGATGATGTCATTTGTATATCAACTACACCGCCACCAGCATTACCGGCACCAGTGCAGCCATCCAGTAAGAAAGAATTAAAAAATGGCAAAGTTTCACAAAATGCTAATAATAAATGA
- Protein Sequence
- MVLAEKNSENARNGRRSRGPSPNGHAQDSGSEEEIVPVDKIRVGRDYQAICPELQPEAQRKPELLADRALLVWSPTESIPESKLEDYIILAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDDWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKEEGGASEAGSEGGGSNEESDHDEKKWTIHRGIRRKSGSPSRTGQHPDENATQGEGGACSNCGVACTVTHVTSRGSLCNSCYQHWRRTGLLRPTSGPTGGKRGSPLGGRHKRKPPRGMYINHDDLAAMASGSAGGLMLKAMDRELDSLQRQIQQNKQNLSSLKRKHSDSIEDLRPSNDNSTRINARWTNEELLLAIQGVRKYGKDFKSIAEVLGNKTEQHVRQFFVNYRKRYNLDNVLKDWENDNGPIPVDDNNGEIKMDLDDSNNDDVICISTTPPPALPAPVQPSSKKELKNGKVSQNANNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566170;
- 90% Identity
- iTF_01409922; iTF_00870502; iTF_01567817; iTF_01480803; iTF_01480051; iTF_00639466;
- 80% Identity
- -