Tcas003295.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000002335.3
- Location
- NC:8435481-8471443[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 7.6e-15 53.9 0.0 1 44 302 346 302 347 0.94 2 2 5.5e-19 1.2e-15 56.5 0.0 1 43 638 681 638 683 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGCTCTTATGCGCGATGCGTTCAACAGAGGAGAAATATTAGAAGAGAACTTCAAAGATGGACAAGAAACATGGTTCACATTGTCGGGTTGGAACGAATCGCTGAAGAGTTGATGGGTCGGAGGAAATGGAAACTGTACCAAGAGTCCATATCGAGGAGTTATTTGCAACCGTTGAACAACAACGTCAAGACCCAAGATCGCCACGACCAAAAAGACACCGCCACCTCATCGCCGAAAAACGACGCCGACGGCGCCGACGCCGCCACGGAACCCAAGGAAAAAGAAAACGAAAAGAGCTCGCAAGAAGTTGAGGACAGGCTCAAGGACTGGACGCCGCAGACGAAGTGCTACTTCTGCGTCGACGGCAAGCTGGATAGTGAACACACGGCACACGGGGTTCTGAGTCCCCGCCATTCGGACTCGGATTCGTCTGACAGCCACAGTGACAACGAGGTCCCGCCATCGCTCACTCCCTCCGGGAGCTTGCTCAACAATAACCACCACCGCCACCGGCAGCCGGTGGCACCGGCCAACATGACGACGATCGAGAGCGTCACGTCGATGGCGGCGTTGGCGGCGGCCTTCTCCGGCGGGAACTCGCCGGGAACGACCGCCCCCCACTTGCCCTTCTACGCCCCGAGCATCATCTCCCACAACTGGTATCTCGCCAACGTGGCGAGGTCCTTCCAGGCGGACAGGCTCGGAGACAACCAGGACAAGGCGGCTTCCGGGGAGCAGCCGCTGGATCTCAGCAAGGGGGCGGCGAGCGCCGCCACCGAAGGCAAAACGCCCAACAACAACGTCCGGTTGCCCACCCTCGACACCAAGCACATATTCAATTCTGATTTTAGAGCGAAACCTAGGATGTCAGCTGTAGCCGGTAGGAGGACGTACACCGAAGACGAACTCCAAGCAGCGTTGAGAGACATCCAGTCGGGCAAATTGGGGACGAGAAGGGCGGCCGTCATCTACGGCATACCCAGGTCGACGTTACGAAACAAAGTCTACAAACTTGCCTTAGAAAGGGAGCGAGAGTCGCATTTGAACAGTACGACGCCGCTCAAGCTCGACGAAGAAGAGGTGATGGAGGACGACAAGGAATTGTCCGGCGCTGAAGAGGAGAAGGAAGTGGAGAAGGCGCTCCAAGCTCCTCTTTGTGATATCTTGAGGTTCTCGAACGTGGAGATACCTCCGGAGGCGCTCAAAGCCCTCCTCCAGAAGAATAAGGAAGGACAAGAACCGTGGGCCGGCATGGAGCACAGCGAGGTCGGACCTTACATCCAAAACCTCCTCCTAGCCTCCCAGAACCTCCTCAGCAACCAGAAACCTCTCGAAAACTCGGTTCTAAACAGTGTCGTGCCAGAATTCGTAAAACGGCTGATAACGGACGAAACAAAAAATAACGGTGATACAGTGTCAAGGCCGAGTCCGTCGAATTCGGCAGCACCCAAACCCAAATCCGAATCGGACATGGAAACGGAGGAGTCGCCTTCGAATGTGATACTAAAAATTCCGTCCTTTAAACCGACGTCGAGCAAGAACGGATGTGATTTATTCAGAGGTTCCGAAACCGGAAGCATGGTCTCACCCCCGGTCACGAGCGAGTCGGGCTCGCCCCCGATCCTCCCCGGCAAAGGCATGACGATCAAAGACGTCAAGGACGTCATCGCTCAAAGCATCAGCCAGAAGTTCCAGCAGACCTTGGAGCCTCGACGGCCTTCCATCTCCGAGATGGACTACAAGCGGGGCGGTTTCACGCCGCCGCTCGCCTCCGGCATCTCCGTCATGAAGACCCAAGACCTCACCCGGCCCTACCAGCCGCCCCCCAAGCCCCAGCAGAGCCCCGCGCCCGCCACCGGCGGCAAGGGCACGCGCCCCAAGCGGGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTGGAGGCGGTCCGGGCGGTGCAAAGGGGCGAGATGTCGGTGCACCGCGCCGGCAGCTACTACGGCGTGCCCCACTCGACCCTCGAGTACAAAGTCAAGGAGAGGCACCTCATGCGGCCGCGGAAGCGCGACCCCAAGCCCAACCCCGTCGACGAGAAAATCGCCAGCCTCAAGCAGAACGACATCCGAGCCCAGGAGAAGCTCAAACCGATGATGAAACCCCCGCAGAAGTTCCCTCCGACGGCGACGTCGCCCAACGGCATCAAACTCCCGATTTTCGAGCCGGGGATGGCGCCGCTCGCCGGCTACAACCCTCCTCCCTTCCCCTTCTGGCCGCATCCTGGCTTCCACCACATCCCGTTGGAGTACGGCCGACCCATACCTCCCAACCCGGAGTTCTTCGCCTCGCAGATGATGCAAAAGCTGCAGGAGGAGTCCTCCAGGACCGGAATCACCGGACAGGGCACCACGCCGCCCAATGCCCCGGCGTTGGCCAAAAGCGCAAGGCAAATTGCCGAGTCACTGCTCGATGGGACGGGCTCCAACGGGTCCTTCTTGGACGGCATCATCAGGTCCAGTCTGGAGTCGGGAGTGCCCACCAACGAGGAGAAATTATCCAAAGAAGACAAAAACGTCGCCGTTGAAAACCTCTCCAATAAAGCACTTTTAGACCAACTGTGCAGGAACAGCAGACTGACGCCACTTTCGAAGCCTTCGATGACTTCAGAAACCAACAGCTCGGGAGATGAGTCCTACAGGAAGGGCGCCAGTCCTCTCAACTTCACGGCTGGAGCTTCGAACTCGAAAGAGGGCGACACCTCCCCCGGCGAGCTGCCCACAATCGAACTGTCGAACGATTCGAACGAATCAACGGATAAAAGACCGATGATAACGTCGCCGGAATCGGCGACGACGACTACGACATCAACAACAACAGCAACAAGCACACCACCGGCTAGGATTTATCTAAAGAAAGATCTGGCGAATCCAGACAACCTTCAGCCGGAGATGCTGATGCGCTTCCGGGACGTCCTTCCCGACTTGGAGCGTAACGGCGTCGGCGAAGGCCTCGTAACAGGAAGTGCCTCAGATAATGACGCGCCTCAAGACTGA
- Protein Sequence
- MAECSYARCVQQRRNIRRELQRWTRNMVHIVGLERIAEELMGRRKWKLYQESISRSYLQPLNNNVKTQDRHDQKDTATSSPKNDADGADAATEPKEKENEKSSQEVEDRLKDWTPQTKCYFCVDGKLDSEHTAHGVLSPRHSDSDSSDSHSDNEVPPSLTPSGSLLNNNHHRHRQPVAPANMTTIESVTSMAALAAAFSGGNSPGTTAPHLPFYAPSIISHNWYLANVARSFQADRLGDNQDKAASGEQPLDLSKGAASAATEGKTPNNNVRLPTLDTKHIFNSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSTTPLKLDEEEVMEDDKELSGAEEEKEVEKALQAPLCDILRFSNVEIPPEALKALLQKNKEGQEPWAGMEHSEVGPYIQNLLLASQNLLSNQKPLENSVLNSVVPEFVKRLITDETKNNGDTVSRPSPSNSAAPKPKSESDMETEESPSNVILKIPSFKPTSSKNGCDLFRGSETGSMVSPPVTSESGSPPILPGKGMTIKDVKDVIAQSISQKFQQTLEPRRPSISEMDYKRGGFTPPLASGISVMKTQDLTRPYQPPPKPQQSPAPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRAQEKLKPMMKPPQKFPPTATSPNGIKLPIFEPGMAPLAGYNPPPFPFWPHPGFHHIPLEYGRPIPPNPEFFASQMMQKLQEESSRTGITGQGTTPPNAPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLESGVPTNEEKLSKEDKNVAVENLSNKALLDQLCRNSRLTPLSKPSMTSETNSSGDESYRKGASPLNFTAGASNSKEGDTSPGELPTIELSNDSNESTDKRPMITSPESATTTTTSTTTATSTPPARIYLKKDLANPDNLQPEMLMRFRDVLPDLERNGVGEGLVTGSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01409875;
- 90% Identity
- -
- 80% Identity
- -