Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963966145.1
Location
OZ014540.1:27158532-27170427[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-17 1.7e-14 53.8 0.0 1 44 320 364 320 365 0.94
2 2 5e-18 2.6e-15 56.4 0.0 1 43 659 702 659 704 0.95

Sequence Information

Coding Sequence
atgcgcTTCCGTTCGATCGCAGTATGTAATACATGTGCGTGTGCAGGGTTGGAACGAATCGCTGAAGAGTTGATGGGTCGGAGGAAATGGAAACTGTACCAAGAGTCCATGTCGAGGAGTTATTTGCAACCGTTAAACAACAACGTGAAGACGACGCCGCGAACGAACCTAGACGATCACCATCACTACAAGGAGGAGACGCCGGATCCCGCCGTACAAAACCACCACCATCATCATATTCATCAGAAAGACAACACCGCCACCACGTATACCTCATCATCGACGCCGAAAAACGACGACGACGGCGGCGACGCCGCGACGGAACGCAAGgaaaaagaaaacgaaaagaGGACGCAAGAAGTCGAGGACAGGCTCAAGGACTGGACGCCGCAGACGAAGTGCTACTTCTGCGTGGACGGCAAGCTGGATAGTGAACACACCGCACACGGGGTTCTGAGTCCCCGCCATTCGGACTCGGATTCGTCGGACAGCCACAGTGACAACGAGGTACCGCCATCGCTCACACCGTCGGCGACGGGGAGCTTGCTCAACAAcaaccaccaccaccaccgcCACCGGAACGTCCACCCGGTGGCGCCGGCCAACATGACGACGATCGAGAGCGTCACGTCGATGGCGGCGCTGGCGGCGGCCTTCTCCGGGGGCAACTCGCCCGGGATGACGGCACCGCACCTGCCTTTCTACGCCCCCAGCATCCTCTCGCATAACTGGTACCTGGCCAACCTGGCGAGGTCCTCGCAGGCGGAGCGGCTGGAGCACCAGGACAAGGTCGGCTCCGGCGAGCAGCCGCTGGATCTCAGCAAGGGGGCGAGCAACAGCTCGGACGGGATGCCCATCAACAGTGTGAGGCTGCCGACGCTGGACACCAAGCACATTTTCAATTCTGATTTTAGAGCGAAACCTAGGATGTCCGCTGTAGCCGGCAGGAGGACGTACACCGAAGACGAACTCCAGGCGGCGTTGAGAGACATCCAGTCGGGAAAGCTGGGCACCAGGAGGGCGGCCGTGATCTACGGCATACCGAGATCGACGCTGCGGAACAAAGTCTACAAACTTGCCTTAGAGAGGGAGCGAGAGTCGCACTTGAACAGCGCGACGCCCCTGAAACTCGACGAAGAGGAGGCGATGGAGGACGACAAGGAGCTGTCGGGGGCCGAGGAGGAGAAGGAGGTGGAGAAGGCGCTCCAGGCGCCGCTTTGTGATATCTTGAGATTCTCACAGATGGAGATCCCTCCGGAGGCGGTGAAGGCGCTGCTCCAGAAGAACAAGGAGGGACAGGAGGCGTGGGCCGGACTGGAGCACAGCGAGGTGGGACCCTACATCCAGAACTTGTTGCTCGCCTCCCAGAACCTCCTGGCCAACCAGAAACCGATGGAGAACTCGGTGCTGAAGAGCGTGGTGCCGGAATTCCTCAAGCAGATGATGACGGACGACCAGACGAAATCCAACGGTGATAACGTGACGAGACCGAGCCCGTCGAATTCTGTAATAACCAGACAACCCAAATCTGAGTCGGACATGGAAGCGGAGGAGTCGCCTTCGAATGtgatactaaaaattccgtCCTTTAAACCGACGTCTAGCAAGAACGGATGTGATCTATTCAGGAACACCGCGGAAACGGGGAGCATGGTCTCGCCCCCGGTCACCAGCGAGTCGGGCTCGCCCCCGATCCTCCCCGGCAAGGGCATGACGATAAAGGACGTCAAGGATGTCATCGCTCAAAGTATCAGCCAGAAATTCCAGCAGAACCTGGAGCCGCGAAGGCCTCCGATGATGGAGATGGATTTTAAGCGGGGCGGCTTCACGCCGCCGTTGAGCGGCGGCATCTCCGTGATCAAGACCCAAGACCTGACCCGGCCCTACCAGCCGCCCCCCAAGCCCCAGCAGAACCCCACCCCCAATTCCGGCGGCAAGGGCACCAGACCCAAGCGCGGCAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCCGTGCGGGCCGTGCAGAGGGGCGAGATGTCGGTCCACCGGGCGGGGAGCTACTACGGCGTCCCCCATTCGACCCTCGAGTACAAAGTGAAAGAGAGACACTTGATGCGGCCCCGGAAGAGGGACCCCAAGCCCAACCCCGTCGACGAGAAGATCGCCAGTTTGAAGCAGAACGACATCCGCGCCCAGGAGAAGCTCAAACCGATGATGAAACCCCCGCAGAAGTTCCCGCCGACGGCGACGTCCCCCAACGGCATGAAACTCCCGATTTTCGAGCCGGGCATGGCGCCCCTGGCCGGCTACAACCCGCCGCCGTTCCCCTTCTGGCCGCACCCGGGGTTCCACCACCTCCCGCTCGAGTACAGCCGGCCCATTCCCCCCAACCCCGAGTTCTTCGCCTCGCAGATGATGCAGAAGCTTCAAGAGGAATCGTCGAGGGGGATCGGGCCCCAGACCGCCGCCCCCCCGAATGCCCCCGCTCTGGCGAAGAGCGCCAGGCAGATAGCCGAGTCGCTGTTGGACGGGACGGGGTCCAACGGCTCGTTCCTCGACGGGATCATCCGGTCCAGTCTGGAGTCGGGCGTGCCCACCACCGACAAGTCCCCCAAGGAGGATAAGAACGTACCCGTGGAAAACCTGTCGAACAAGGCGCTGCTCGATCAGCTGTGCAGGAACAGCAGGCTGACGCCGCTTTCTAAACCTGCGATCACGCCGGAGGCCAACAGCTCGGGAGATGAGTCGTATAGGAAGGGACCCAGTCCCCTCAACTTCACTGCTGGAGGATGCAATTCCAAGGATGGCCACCACCAGACGGACACGTCTCCGCCGCGCTACGAAGGAGCGGACCTGCACACGATCGAACTGTCGAACGATTCGAACGAGTCGACGGAGAGGAATCCGAACTTGTCGTCAAGAGAAGAACCGTCGACGACACCACCGACGACAACGGCGACAAGCACGCCACCGGCGAGGATCTACCTAAAGAAAGATCTGGCCAACCCGGACAACCTTCAACCTGAAATGCTGATGCGCTTCCGGGACGTCCTTCCCGACATGGAGCGGAACGGCGTCAGCGAAGGTATAACAGGAAGTGCCTCAGATAATGACGCGCCTCAAGACTGA
Protein Sequence
MRFRSIAVCNTCACAGLERIAEELMGRRKWKLYQESMSRSYLQPLNNNVKTTPRTNLDDHHHYKEETPDPAVQNHHHHHIHQKDNTATTYTSSSTPKNDDDGGDAATERKEKENEKRTQEVEDRLKDWTPQTKCYFCVDGKLDSEHTAHGVLSPRHSDSDSSDSHSDNEVPPSLTPSATGSLLNNNHHHHRHRNVHPVAPANMTTIESVTSMAALAAAFSGGNSPGMTAPHLPFYAPSILSHNWYLANLARSSQAERLEHQDKVGSGEQPLDLSKGASNSSDGMPINSVRLPTLDTKHIFNSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSATPLKLDEEEAMEDDKELSGAEEEKEVEKALQAPLCDILRFSQMEIPPEAVKALLQKNKEGQEAWAGLEHSEVGPYIQNLLLASQNLLANQKPMENSVLKSVVPEFLKQMMTDDQTKSNGDNVTRPSPSNSVITRQPKSESDMEAEESPSNVILKIPSFKPTSSKNGCDLFRNTAETGSMVSPPVTSESGSPPILPGKGMTIKDVKDVIAQSISQKFQQNLEPRRPPMMEMDFKRGGFTPPLSGGISVIKTQDLTRPYQPPPKPQQNPTPNSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRAQEKLKPMMKPPQKFPPTATSPNGMKLPIFEPGMAPLAGYNPPPFPFWPHPGFHHLPLEYSRPIPPNPEFFASQMMQKLQEESSRGIGPQTAAPPNAPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLESGVPTTDKSPKEDKNVPVENLSNKALLDQLCRNSRLTPLSKPAITPEANSSGDESYRKGPSPLNFTAGGCNSKDGHHQTDTSPPRYEGADLHTIELSNDSNESTERNPNLSSREEPSTTPPTTTATSTPPARIYLKKDLANPDNLQPEMLMRFRDVLPDMERNGVSEGITGSASDNDAPQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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