Basic Information

Insect: Triatoma rubrofasciata
Gene Symbol: -
Assembly: None
Location: chr5:21339078-21354234[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00036 0.022 14.7 1.4 2 22 465 485 464 488 0.90

2 16 0.00021 0.013 15.5 4.3 1 22 549 570 549 573 0.90

3 16 0.15 9.4 6.4 0.1 1 23 621 645 621 645 0.97

4 16 0.079 4.8 7.4 0.8 3 23 720 741 719 741 0.95

5 16 0.013 0.76 9.9 6.8 1 23 775 797 775 797 0.94

6 16 4.1e-05 0.0025 17.7 0.9 2 23 806 827 805 827 0.96

7 16 0.11 6.5 6.9 0.5 3 21 838 856 836 857 0.91

8 16 0.00068 0.041 13.9 2.0 1 23 866 889 866 889 0.96

9 16 0.00081 0.049 13.6 1.7 2 19 921 938 920 943 0.93

10 16 0.024 1.4 9.0 0.7 2 20 982 1000 981 1002 0.93

11 16 8.5 5.2e+02 1.0 0.1 1 21 1122 1142 1122 1143 0.88

12 16 0.56 34 4.7 0.1 3 19 1154 1170 1152 1171 0.93

13 16 0.0011 0.068 13.2 1.1 1 23 1182 1205 1182 1205 0.94

14 16 0.0024 0.15 12.1 0.1 1 23 1317 1339 1317 1339 0.93

15 16 0.63 38 4.5 1.1 2 14 1384 1396 1383 1399 0.87

16 16 0.0012 0.071 13.1 2.0 1 23 1504 1526 1504 1526 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00036	0.022	14.7	1.4	2	22	465	485	464	488	0.90
2	16	0.00021	0.013	15.5	4.3	1	22	549	570	549	573	0.90
3	16	0.15	9.4	6.4	0.1	1	23	621	645	621	645	0.97
4	16	0.079	4.8	7.4	0.8	3	23	720	741	719	741	0.95
5	16	0.013	0.76	9.9	6.8	1	23	775	797	775	797	0.94
6	16	4.1e-05	0.0025	17.7	0.9	2	23	806	827	805	827	0.96
7	16	0.11	6.5	6.9	0.5	3	21	838	856	836	857	0.91
8	16	0.00068	0.041	13.9	2.0	1	23	866	889	866	889	0.96
9	16	0.00081	0.049	13.6	1.7	2	19	921	938	920	943	0.93
10	16	0.024	1.4	9.0	0.7	2	20	982	1000	981	1002	0.93
11	16	8.5	5.2e+02	1.0	0.1	1	21	1122	1142	1122	1143	0.88
12	16	0.56	34	4.7	0.1	3	19	1154	1170	1152	1171	0.93
13	16	0.0011	0.068	13.2	1.1	1	23	1182	1205	1182	1205	0.94
14	16	0.0024	0.15	12.1	0.1	1	23	1317	1339	1317	1339	0.93
15	16	0.63	38	4.5	1.1	2	14	1384	1396	1383	1399	0.87
16	16	0.0012	0.071	13.1	2.0	1	23	1504	1526	1504	1526	0.98

Sequence Information

Coding Sequence: ATGAGTGATCCGATCCCAAATGTTGAAGGTTTATGCAGGCTTTGCCTTAGTAATGGAGAAAATAAATCTGTTTTTGATCGAGATGAGGGAAATCAACAGATCACATTTATTATCAAGATCCAAGACTGTGTTTCCGTCAATATTACTAAAGATAATGAACTGCCAACTGTTGTTTGCAAAGACTGTGAAACCTTTGTTAACTCTTGGTTTTTATTTAAAGAAAAATGTGATAAAGCTCAAATATTTTTGAAAAAATGGTTAAGAAATAAACAGCTACAGATTGAGGGTAACAAAGTGAAAGACGGGAATAATGAAAATGTTGATAAATCTGGTGATTCGGATAAGGCGGCAAGTGACAAAAATCAACAGCAGTACGAGGGAGGAGGAATGCCAGTGGTCACAGTGGAAGATGTTGAATCAGCAATAGGTGATTGTCAAAACGATAATAGAGAGAATATTGATTATGAACAAATATTAAATGATTGTAATTCTGTTGCATCATCATTTGCTTCAGATATTAAAGAAGGTGGTAGCAATGAGGAGGGTAATGTTTGTGATAATAGATCGGGTGAAGCCATTATTAATTTAGATTGTGATGACAATGAGACTGGACAACAACAAATCATTTCATCTGTATTGCCAACTAATAATAATGATACTACAAATACGGAAACAGGAAATAAAACTGGTGAAATCAATAAGGAGCATTCTGGCCAGGAAGGTGAAAAACAAAAAGGTCGTGGTGATGTTGAAAATGAAAAAAATAATGAAACAATTATTGGCGATGATGATGATGATGATGATGATGAGATCAGTATATTAGATGAGAATGTATCATCAACCGTAACTTCTTCAAGTAATAAGGGTACAACAGGTGATAATAACAATCAGTCATCATGTCATGCTATAAAAATAGCTTCAACAGTTTCACTTTCTAAAGGATTTTTTTATGGTAATTTTGATGAATTAAATGGCAATACTAATGAATCAAATAAACAAAATGAATGTACAGCTGTTGTTAATGAAAAAGTTTCTGGAAATCAGAATGATACTTCACTCACTACTAATTCACTAGCAAATAATGGGGAAGAAAATTCTGATGCTAATGTTTCTGGTAGTGATGTTGGTAAAGTTGTATCATCAGAGAACAATGTCACCGACTCAGATGTTGCTTCCAGCGAGCCCACTGTACCTGATTCAACCATGACTTCTCCTAAAGAACAAGATGTTAATATTATGAAGATGGTTACTCGTATTAAAACAGAGCCAGTTGATGATCAAGAATTAAGTGAAAGTGCGGTTGGTGAGATTAGAGTAAAAACAGAACCAGAAGAATTAGTTGAAGAACATTCCGTAACAGTCCCAGAAGATGATATTGATATGGCAAATAACAAATGTACACTTTGTAATTATGTCTTTTCATCGAATAACAGTTTAGTTAGACATTTATCTTCCCGGAAACATATTCGCCGTACATTACCACCAGATGCAGAAGTAAAAGTGGAAACACCAAAATCTGATCATTTAACCTCAGAAATATTACCAGACAATACTGTAAGATCGACAAGGCAAAAGAATAAAGGGTTCAACAATTTTGATGGCGCTTTTACAGATGACTCCCAAGAAACATATCTAGATGATTCATTCTTTTGTAAAATATGCAATAGAAGTTATTGTTCAGCTTCAGAATTGAAAAGACATAATAGATCTTTGAAACATATGCGTAATTTAAATATTAGAGCCGCATTGAAACGTAAGGCTAATAACCAGTTAGTGCAGGGACAATTGTATGGGATAGATGGTGGTTGCCCTCCAGCTTTTGGTGGATACACAAATGTGCCGGCACGTGTACAAAAAGATTACATATGTCCAATGGAGGATTGTAATTTTGCTTGTAAAGAAGGGCCATCATTATTAGAACATATGATGATACATGGTATACGAAACAGTAACCCGTCTAATGAAGAAGTGGAAAAGCCAGAACCACAATCCATACAGAAAATCTATTGTAAATGTAAACAAATATTCACAAATAATAACGAATATTTGTGTCATTTAAAAGTTTGTCGTTTAATGAACAAAATACCGAATATGCCTTCCCAAATGTATGATACTACCACAAGTGCATCACAAAATGCACAACCTCCAAAACGAGCGTGCAGATTGTGTGATTTAACATTCACTTCTCACGAAGTTTATTTAAATCATTTGCAAATTTATCATAAAGGATCATCATTAGAACAGAATGTACCAAAAATGAAAGTACCACAAATTTCTGGCAAATTATGGACCCAATTTGTTAGTAAAAGTGGTGAAATATTATATAATTGTATTATATGTCATAAAAAATTTAAACAACATTTCTCGTTAAATTCACATTTAAGACAGCATAAACAACCTCCAATGAGACGTGATGTATGTAAAATTTGTAATAAAATTTTTTCGAATAGTAAATTTTTTGAAAAACATGTAAGGGGACACTTTTTGCCACCGAATTCAAGAAAATTGTTCTGTTTTAAGTGCTATAAAACGTTTGACCATCGTGGTGAGATAATTGCACATAGAGCTACATGTAATTCAATGAAAATGAAAATCTATTCATGCAGTATTTGCAAACATTCGTTTAAAGATTTATTTGCCTTGAAAGAGCATAAAATTAGAGCGCATACATCAATTTTACCTGTGCAAGCATTGTGCACGGTTGATATTAAAGAAGATCCGGTGCCGATTAGGACTCCGATAATTGTGAATGAGAACAAAGTGTGTCCAATATGTAATAAATCATTTTACAATTATCAGAATATGAAAAGACATTGTTTAGCAGTGCACAAAGATGAAGATCTAAGTTTTCTTGAGTATGGACCATTTGCACATTTTGATGAACCCACTACATCCACCACACAATCAAATATGATCGAGTCACAGATTGAACAAGACAATTGGACATGCCAATTTTGTAGAAAAGAATTTAGAAGTGAAAAATTGTTGATCTATCATATTGAACATCAGTGTCCGTATTTGCAACATATTTCTAATAATACATCAGATATGGCAATGGATAAACCTCCAAACCATAGACACAAACATAGATGCATTATTTGTGCAAGATTTTTACCATCATTTCAAAATGCATCAAATACTGTATGCGCTAGATGTATGGCGAAATTTGAGGAAAATCCAATGTCAAAAGAAGAACTGGCTAAAAAATCATTTATAGCTAGCCAGCCTATTATAAAAAATGCTTTTAATTCTGCAAAAACGGCTCCATCAAGTTCAACTTCTGCCTTTACTAGTGAAGTTGATATTCAACAAATCACTGTAAAACCGACTGTTCAACAGCCTTCCCAATCGAAAGGCAAATTTTTCCAATGTCCAATTGGTAAAAAACAATTCACTACTGAAGCATGGATGATGAAGCATTTTAGAAATTGTGACGGCATGTGTCCATCTTATATTAATTGTGCTCGTTGTAATTTAAATTTTAAAAGTGTCAGCATGTATGAAAAGCATGTACCAAAATGTGAAGCCGGTACAATAAAAAGATTTGATTGTTCGTTATGTGGTAAAACGTATTCAAAGAGGGATTATGTGGTGAAACATAAACAGTATGCGCATAAAAAACAAATAAAAAAACGTAGTAATGAAATTGAAGGCATGGAATATGTAGATTGGATGGAACAAATAAGTTTCGATTCGGCTTCAAATCGTCGCCGCCTCTTATATCAACAACAATTACAACAACAACAGTATGTTGAACAACCGGAAGATATGATTGAAGAAATACAGACAGAAGTGAAACAGGAAGCTGAAGAGCTAGAAGAGGATGAAGACAAACAAGGGATGGACGATTTAGACCAACCGGTTGAACTTCCTTTAGAGATTATACACACAGAAGGTGTTGATAGTGTTGAAATTCCTAAAGATAGTGTCGAAGATGAAACAAAATCTTTTCCATGTGATGGATGTTCCAGGGTATTCAATACATATAAAGGACTAGCCAATCATAGTGTTGTGCACAATAGAATTAATGTAACCAACAAATCACAATATGATTGTAAATTCTGTCAAAGAGGTGATCTATTACAATCGCAAATCTATTCGCATACGTATAGGTGTATAAAATTGTTATTATCCCAAGAGCCAGTAGTTTCTTGTAAACATTGCCAACGTAATTTCAATACATCACAGCAGACAAAAGAATTTTCAGCAAATCTTATATCGCATGTATTCGATTGTTACGATATACCTTATTATAAAAATGAAGACGATGGAGGTAGAAATCCAAGATTGTTATGCTATATTTGTTGTTACGCCTTCTCTTGTCCAGATAAATTAAGATTTCATAAAGCAGAACACGCTAGGAAAAGTCATGCCAAAAGTTATTCAAAAAAAGCTAAAAGGAAAATTAGACCAGATATGGAAAATAGTTTAATGGATTGTTTTTCCAACCAAACTGAATATCCGTATGATTTACAGCCACCAAGAAAAATGTTTCGTGATTCAAAATTATTCAAATGTAGGGTATGTAATCGACCGTTTTTTAGTTTAAATAAACTGAAAAATCATGAAAAAGTACATGGTATAATACAGAAGAATGTCTATAGTGATGAACCCGCCCCGCCAGAAAGTTGA
Protein Sequence: MSDPIPNVEGLCRLCLSNGENKSVFDRDEGNQQITFIIKIQDCVSVNITKDNELPTVVCKDCETFVNSWFLFKEKCDKAQIFLKKWLRNKQLQIEGNKVKDGNNENVDKSGDSDKAASDKNQQQYEGGGMPVVTVEDVESAIGDCQNDNRENIDYEQILNDCNSVASSFASDIKEGGSNEEGNVCDNRSGEAIINLDCDDNETGQQQIISSVLPTNNNDTTNTETGNKTGEINKEHSGQEGEKQKGRGDVENEKNNETIIGDDDDDDDDEISILDENVSSTVTSSSNKGTTGDNNNQSSCHAIKIASTVSLSKGFFYGNFDELNGNTNESNKQNECTAVVNEKVSGNQNDTSLTTNSLANNGEENSDANVSGSDVGKVVSSENNVTDSDVASSEPTVPDSTMTSPKEQDVNIMKMVTRIKTEPVDDQELSESAVGEIRVKTEPEELVEEHSVTVPEDDIDMANNKCTLCNYVFSSNNSLVRHLSSRKHIRRTLPPDAEVKVETPKSDHLTSEILPDNTVRSTRQKNKGFNNFDGAFTDDSQETYLDDSFFCKICNRSYCSASELKRHNRSLKHMRNLNIRAALKRKANNQLVQGQLYGIDGGCPPAFGGYTNVPARVQKDYICPMEDCNFACKEGPSLLEHMMIHGIRNSNPSNEEVEKPEPQSIQKIYCKCKQIFTNNNEYLCHLKVCRLMNKIPNMPSQMYDTTTSASQNAQPPKRACRLCDLTFTSHEVYLNHLQIYHKGSSLEQNVPKMKVPQISGKLWTQFVSKSGEILYNCIICHKKFKQHFSLNSHLRQHKQPPMRRDVCKICNKIFSNSKFFEKHVRGHFLPPNSRKLFCFKCYKTFDHRGEIIAHRATCNSMKMKIYSCSICKHSFKDLFALKEHKIRAHTSILPVQALCTVDIKEDPVPIRTPIIVNENKVCPICNKSFYNYQNMKRHCLAVHKDEDLSFLEYGPFAHFDEPTTSTTQSNMIESQIEQDNWTCQFCRKEFRSEKLLIYHIEHQCPYLQHISNNTSDMAMDKPPNHRHKHRCIICARFLPSFQNASNTVCARCMAKFEENPMSKEELAKKSFIASQPIIKNAFNSAKTAPSSSTSAFTSEVDIQQITVKPTVQQPSQSKGKFFQCPIGKKQFTTEAWMMKHFRNCDGMCPSYINCARCNLNFKSVSMYEKHVPKCEAGTIKRFDCSLCGKTYSKRDYVVKHKQYAHKKQIKKRSNEIEGMEYVDWMEQISFDSASNRRRLLYQQQLQQQQYVEQPEDMIEEIQTEVKQEAEELEEDEDKQGMDDLDQPVELPLEIIHTEGVDSVEIPKDSVEDETKSFPCDGCSRVFNTYKGLANHSVVHNRINVTNKSQYDCKFCQRGDLLQSQIYSHTYRCIKLLLSQEPVVSCKHCQRNFNTSQQTKEFSANLISHVFDCYDIPYYKNEDDGGRNPRLLCYICCYAFSCPDKLRFHKAEHARKSHAKSYSKKAKRKIRPDMENSLMDCFSNQTEYPYDLQPPRKMFRDSKLFKCRVCNRPFFSLNKLKNHEKVHGIIQKNVYSDEPAPPES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01479664;
90% Identity: iTF_01479664;
80% Identity: -