Basic Information

Insect: Triatoma rubrofasciata
Gene Symbol: -
Assembly: None
Location: chr5:21752117-21767257[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00035 0.021 14.8 1.4 2 22 435 455 434 458 0.90

2 16 0.00021 0.013 15.5 4.3 1 22 519 540 519 543 0.90

3 16 0.017 1.1 9.4 0.2 1 23 591 615 591 615 0.97

4 16 0.077 4.7 7.4 0.8 3 23 690 711 689 711 0.95

5 16 0.012 0.75 9.9 6.8 1 23 745 767 745 767 0.94

6 16 4e-05 0.0024 17.7 0.9 2 23 776 797 775 797 0.96

7 16 0.11 6.4 7.0 0.5 3 21 808 826 806 827 0.91

8 16 0.00066 0.04 13.9 2.0 1 23 836 859 836 859 0.96

9 16 0.00079 0.048 13.7 1.7 2 19 891 908 890 913 0.93

10 16 0.023 1.4 9.0 0.7 2 20 952 970 951 972 0.93

11 16 8.3 5.1e+02 1.0 0.1 1 21 1092 1112 1092 1113 0.88

12 16 0.55 34 4.7 0.1 3 19 1124 1140 1122 1141 0.93

13 16 0.0011 0.067 13.2 1.1 1 23 1152 1175 1152 1175 0.94

14 16 0.0024 0.14 12.2 0.1 1 23 1287 1309 1287 1309 0.93

15 16 0.61 37 4.6 1.1 2 14 1354 1366 1353 1369 0.87

16 16 0.0011 0.069 13.2 2.0 1 23 1474 1496 1474 1496 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00035	0.021	14.8	1.4	2	22	435	455	434	458	0.90
2	16	0.00021	0.013	15.5	4.3	1	22	519	540	519	543	0.90
3	16	0.017	1.1	9.4	0.2	1	23	591	615	591	615	0.97
4	16	0.077	4.7	7.4	0.8	3	23	690	711	689	711	0.95
5	16	0.012	0.75	9.9	6.8	1	23	745	767	745	767	0.94
6	16	4e-05	0.0024	17.7	0.9	2	23	776	797	775	797	0.96
7	16	0.11	6.4	7.0	0.5	3	21	808	826	806	827	0.91
8	16	0.00066	0.04	13.9	2.0	1	23	836	859	836	859	0.96
9	16	0.00079	0.048	13.7	1.7	2	19	891	908	890	913	0.93
10	16	0.023	1.4	9.0	0.7	2	20	952	970	951	972	0.93
11	16	8.3	5.1e+02	1.0	0.1	1	21	1092	1112	1092	1113	0.88
12	16	0.55	34	4.7	0.1	3	19	1124	1140	1122	1141	0.93
13	16	0.0011	0.067	13.2	1.1	1	23	1152	1175	1152	1175	0.94
14	16	0.0024	0.14	12.2	0.1	1	23	1287	1309	1287	1309	0.93
15	16	0.61	37	4.6	1.1	2	14	1354	1366	1353	1369	0.87
16	16	0.0011	0.069	13.2	2.0	1	23	1474	1496	1474	1496	0.98

Sequence Information

Coding Sequence: ATGAGTGATCCGATCCCAAATGTTGAAGGTTTATGCAGGCTTTGCCTTAGTAATGGAGAAAATAAATCTGTTTTTGATCGAGATGAGGGAAATCAACAGATCACATTTATTATCAAGATCCAAGACTGTGTTTCCGTCAATATTACTAAAGATAATGAACTGCCAACTGTTGTTTGCAAAGACTGTGAAACCTTTGTTAACTCTTGGTTTTTATTTAAAGAAAAATGTGATAAAGCTCAAATATTTTTGAAAAAATGGTTAAGAAATAAACAGCTACAGATTGAGGGTAACGAAGTGAAAGACGGGAATAATGAAAATGTTGATAAATCTGGTGATTCGGATAAGGCGGCAAGTGACAAAAATCAACAGCAGTACGAGGGAGGAGGAATGCCAGTGGTCACAGTGGAAGATGTTGAATCAGCAATAGATATTAAAGAAGGTGGTAGCAATGAGGAGGGTAATGTTTGTGATAATAGATCGGGTGAAGCCATTATTAATTTAGATTGTGATGACAATGAGACTGGACAACAACAAATCATTTCATCTGTATTGCCAACTAATAATAATGATACTACAAATACGGAAACAGGAAATAAAACTGGTGAAATCAATAAGGAGCATTCTGGCCAGGAAGGTGAAAAACAAAAAGGTCGTGGTGATGTTGAAAATGAAAAAAATAATGAAACAATTATTGGCGATGATGATGATGATGATGATGAGATCAGTATATTAGACGAGAATGTATCATCAACCGTAACTTCTTCAAGTAATAAGGGTACAACAGGTGATAATAACAATCAGTCATCATGTCATGCTATAAAAATAGCTTCAACAGTTTCACTTTCTAAAGGATTTTTTTATGGTAATTTTGATGAATTAAATGGCAATACTAATGAATCAAATAAACAAAATGAATGTACAGCTGTTGTTAATGAAAAAGTTTCTGGAAATCAGAATGATACTTCACTCACTACTAATTCACTAGCAAATAATGGGGAAGAAAATTCTGATGCTAATGTTTCTGGTAGTGATGTTGGTAAAGTTGTATCATCAGAGAACAATGTCACCGACTCAGATGTTGCTTCCAGCGAGCCCACTGTACCTGATTCGACCATGACCTCTCCTAAAGAACAAGATGTTAATATTATGAAGATGGTTACTCGTATTAAAACAGAGCCAGTTGATGATCAAGAATTAAGTGAAAGTGCGGTTGGTGAGATTAGAGTAAAAACAGAACCAGAAGAATTAGTTGAAGAACATTCCGTAACAGTCCCAGAAGATGATATTGATATGGCAAATAACAAATGTACACTTTGTAATTATGTCTTTTCATCGAATAACAGTTTAGTTAGACATTTATCTTCCCGGAAACATATTCGCCGTACATTACCACCAGATGCAGAAGTAAAAGTGGAAACACCAAAATCTGATCATTTAACCTCAGAAATATTACCAGACAATACTGTAAGATCGACAAGGCAAAAGAATAAAGGGTTCAACAATTTTGATGGCGCTTTTACAGATGACTCCCAAGAAACATATCTAGATGATTCATTCTTTTGTAAAATATGCAATAGAAGTTATTGTTCAGCTTCAGAATTGAAAAGACATAATAGATCTTTGAAACATATGCGTAATTTAAATATTAGAGCCGCATTGAAACGTAAGGCTAATAACCAGTTAGTGCAGGGACAATTGTATGGGATAGATGGTGGTTGCCCTCCAGCTTTTGGTGGATACACAAATGTGCCGGCACGTGTACAAAAAGATTACATATGTCCAATGGAGGATTGTAATTTTGCTTGTAAAGAAGGGTCATCATTATTAGAACATATGATGATACATGGTATACGAAACAGTAACCCGTCTAATGAAGAAGTGGAAAAGCCAGAACCACAATCCATACAGAAAATCTATTGTAAATGTAAACAAATATTCACAAATAATAACGAATATTTGTGTCATTTAAAAGTTTGTCGTTTAATGAACAAAATACCGAATATGCCTTCCCAAATGTATGATACTACCACAAGTGCATCACAAAATGCACAACCTCCAAAACGAGCGTGCAGATTGTGTGATTTAACATTCACTTCTCACGAAGTTTATTTAAATCATTTGCAAATTTATCATAAAGGATCATCATTAGAACAGAATGTACCAAAAATGAAAGTACCACAAATTTCTGGCAAATTATGGACCCAATTTGTTAGTAAAAGTGGTGAAATATTATATAATTGTATTATATGTCATAAAAAATTTAAACAACATTTCTCGTTAAATTCACATTTAAGACAGCATAAACAACCTCCAATGAGACGTGATGTATGTAAAATTTGTAATAAAATTTTTTCGAATAGTAAATTTTTTGAAAAACATGTAAGGGGACACTTTTTGCCTCCGAATTCAAGAAAATTGTTCTGTTTTAAGTGCTATAAAACGTTTGACCATCGTGGCGAGATAATTGCACATAGAGCTACATGTAATTCAATGAAAATGAAAATCTATTCATGCAGTATTTGCAAACATTCGTTTAAAGATTTATTTGCCTTGAAAGAGCATAAAATTAGAGCGCATACATCAATTTTACCTGTGCAAGCATTGTGCACGGTTGATATTAAAGAAGATCCGGTGCCGATTAGGACTCCGATAATCGTGAATGAGAACAAAGTGTGTCCAATATGTAATAAATCATTTTACAATTATCAGAATATGAAAAGACATTGTTTAGCAGTGCACAAAGATGAAGATCTAAGTTTTCTTGAGTATGGACCATTTGCACATTTTGATGAACCCACTACATCCACCACACAATCAAATATGATCGAGTCACAGATTGAACAAGACAATTGGACATGCCAATTTTGTAGAAAAGAATTTAGAAGTGAAAAATTGTTGATCTATCATATTGAACATCAGTGTCCGTATTTGCAACATATTTCTAATAATACATCAGATATGGCAATGGATAAACCTCCAAACCATAGACACAAACATAGATGCATTATTTGTGCAAGATTTTTACCATCATTTCAAAATGCATCAAATACTGTATGCGCTAGATGTATGGCGAAATTTGAGGAAAATCCAATGTCAAAAGAAGAACTGGCTAAAAAATCATTTATAGCTAGCCAGCCTATTATAAAAAATGCTTTTAATTCTGCAAAAACGGCTCCATCAAGTTCAACTTCTGCCTTTACTAGTGAAGTTGATATTCAACAAATCACTGTAAAACCGACTGTTCAACAGCCTTCCCAATCGAAAGGCAAATTTTTCCAATGTCCAATTGGTAAAAAACAATTCACTACTGAAGCATGGATGATGAAGCATTTTAGAAATTGTGACGGCATGTGTCCATCTTATATTAATTGTGCTCGTTGTAATTTAAATTTTAAAAGTGTCAGCATGTATGAAAAGCATGTACCAAAATGTGAAGCCGGTACAATAAAAAGATTTGATTGTTCGTTATGTGGTAAAACGTATTCAAAGAGGGATTATGTGGTGAAACATAAACAGTATGCGCATAAAAAACAAATAAAAAAACGTAGTAATGAAATTGAAGGCATGGAATATGTAGATTGGATGGAACAAATAAGTTTCGATTCGGCTTCAAATCGTCGCCGCCTCTTATATCAACAACAATTACAACAACAACAGTATGTTGAACAACCGGAAGATATGATTGAAGAAATACAGACAGAAGTGAAACAGGAAGCTGAAGAGCTAGAAGAGGATGAAGACAAACAAGAGATGGACGATTTAGACCAACCGGTTGAACTTCCTTTAGAAATTATACACACAGAAGGTGTTGATAGTGTTGAAATTCCTAAAGATAGTGTCGAAGATGAAACAAAATCTTTTCCATGTGATGGATGTTCCAGGGTATTCAATACATACAAAGGACTAGCCAATCATAGTGTTGTGCACAATAGAATTAATGTAACCAACAAATCACAATATGATTGTAAATTCTGTCAAAGAGGTGATCTATTACAATCGCAAATCTATTCGCATACGTATAGGTGTATAAAATTGTTATTATCCCAAGAGCCAGTAGTTTCTTGTAAACATTGCCAACGTAATTTCAATACATCACAGCAGACAAAAGAATTTTCAGCAAATCTTATATCGCATGTATTCGATTGTTACGATATACCTTATTATAAAAATGAAGACGATGGAGGTAGAAATCCAAGATTGTTATGCTATATTTGTTGTTACGCCTTCTCTTGTCCAGATAAATTAAGATTTCATAAAGCAGAACACGCTAGGAAAAGTCATGCCAAAAGTTATTCAAAAAAAGCTAAAAGGAAAATTAGACCAGATATGGAAAATAGTTTAATGGATTGTTTTTCCAACCAATCTGAATATCCGTATGATTTACAGCCACCAAGAAAAATGTTTCGTGATTCAAAATTATTCAAATGTAGGGTATGTAATCGACCGTTTTTTAGTTTAAATAAACTGAAAAATCATGAAAAAGTACATGGTATAATACAGAAGAATGTCTATAGTGATGAACCCGCCCCGCCAGAAAGTTGA
Protein Sequence: MSDPIPNVEGLCRLCLSNGENKSVFDRDEGNQQITFIIKIQDCVSVNITKDNELPTVVCKDCETFVNSWFLFKEKCDKAQIFLKKWLRNKQLQIEGNEVKDGNNENVDKSGDSDKAASDKNQQQYEGGGMPVVTVEDVESAIDIKEGGSNEEGNVCDNRSGEAIINLDCDDNETGQQQIISSVLPTNNNDTTNTETGNKTGEINKEHSGQEGEKQKGRGDVENEKNNETIIGDDDDDDDEISILDENVSSTVTSSSNKGTTGDNNNQSSCHAIKIASTVSLSKGFFYGNFDELNGNTNESNKQNECTAVVNEKVSGNQNDTSLTTNSLANNGEENSDANVSGSDVGKVVSSENNVTDSDVASSEPTVPDSTMTSPKEQDVNIMKMVTRIKTEPVDDQELSESAVGEIRVKTEPEELVEEHSVTVPEDDIDMANNKCTLCNYVFSSNNSLVRHLSSRKHIRRTLPPDAEVKVETPKSDHLTSEILPDNTVRSTRQKNKGFNNFDGAFTDDSQETYLDDSFFCKICNRSYCSASELKRHNRSLKHMRNLNIRAALKRKANNQLVQGQLYGIDGGCPPAFGGYTNVPARVQKDYICPMEDCNFACKEGSSLLEHMMIHGIRNSNPSNEEVEKPEPQSIQKIYCKCKQIFTNNNEYLCHLKVCRLMNKIPNMPSQMYDTTTSASQNAQPPKRACRLCDLTFTSHEVYLNHLQIYHKGSSLEQNVPKMKVPQISGKLWTQFVSKSGEILYNCIICHKKFKQHFSLNSHLRQHKQPPMRRDVCKICNKIFSNSKFFEKHVRGHFLPPNSRKLFCFKCYKTFDHRGEIIAHRATCNSMKMKIYSCSICKHSFKDLFALKEHKIRAHTSILPVQALCTVDIKEDPVPIRTPIIVNENKVCPICNKSFYNYQNMKRHCLAVHKDEDLSFLEYGPFAHFDEPTTSTTQSNMIESQIEQDNWTCQFCRKEFRSEKLLIYHIEHQCPYLQHISNNTSDMAMDKPPNHRHKHRCIICARFLPSFQNASNTVCARCMAKFEENPMSKEELAKKSFIASQPIIKNAFNSAKTAPSSSTSAFTSEVDIQQITVKPTVQQPSQSKGKFFQCPIGKKQFTTEAWMMKHFRNCDGMCPSYINCARCNLNFKSVSMYEKHVPKCEAGTIKRFDCSLCGKTYSKRDYVVKHKQYAHKKQIKKRSNEIEGMEYVDWMEQISFDSASNRRRLLYQQQLQQQQYVEQPEDMIEEIQTEVKQEAEELEEDEDKQEMDDLDQPVELPLEIIHTEGVDSVEIPKDSVEDETKSFPCDGCSRVFNTYKGLANHSVVHNRINVTNKSQYDCKFCQRGDLLQSQIYSHTYRCIKLLLSQEPVVSCKHCQRNFNTSQQTKEFSANLISHVFDCYDIPYYKNEDDGGRNPRLLCYICCYAFSCPDKLRFHKAEHARKSHAKSYSKKAKRKIRPDMENSLMDCFSNQSEYPYDLQPPRKMFRDSKLFKCRVCNRPFFSLNKLKNHEKVHGIIQKNVYSDEPAPPES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01479671;
90% Identity: iTF_01479671;
80% Identity: -