Basic Information

Insect: Triatoma rubrofasciata
Gene Symbol: L
Assembly: None
Location: chr13:1466073-1486656[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.6e-05 0.0016 18.3 4.9 1 23 75 97 75 97 0.98

2 16 0.11 6.8 6.9 5.3 1 23 103 125 103 125 0.98

3 16 4.3e-07 2.6e-05 23.9 2.6 1 23 131 153 131 153 0.99

4 16 6.9e-06 0.00042 20.1 0.1 1 23 159 181 159 181 0.98

5 16 0.00021 0.013 15.5 0.7 1 23 218 241 218 241 0.97

6 16 0.02 1.2 9.2 1.5 3 23 263 284 261 284 0.96

7 16 2.2 1.3e+02 2.8 1.2 3 21 376 394 375 396 0.94

8 16 0.023 1.4 9.1 0.1 2 23 426 447 425 447 0.96

9 16 0.0042 0.26 11.4 2.3 3 23 457 478 455 478 0.94

10 16 0.056 3.4 7.8 0.5 2 23 558 579 557 579 0.96

11 16 0.036 2.2 8.4 1.2 1 21 583 603 583 606 0.96

12 16 4.9 3e+02 1.7 0.1 9 23 692 707 684 708 0.80

13 16 0.001 0.064 13.3 4.1 2 23 720 741 719 741 0.96

14 16 0.012 0.72 10.0 0.9 1 23 751 773 751 773 0.98

15 16 6.3 3.8e+02 1.4 0.2 3 23 782 802 780 802 0.87

16 16 1.4 85 3.4 0.1 3 23 811 831 810 831 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.6e-05	0.0016	18.3	4.9	1	23	75	97	75	97	0.98
2	16	0.11	6.8	6.9	5.3	1	23	103	125	103	125	0.98
3	16	4.3e-07	2.6e-05	23.9	2.6	1	23	131	153	131	153	0.99
4	16	6.9e-06	0.00042	20.1	0.1	1	23	159	181	159	181	0.98
5	16	0.00021	0.013	15.5	0.7	1	23	218	241	218	241	0.97
6	16	0.02	1.2	9.2	1.5	3	23	263	284	261	284	0.96
7	16	2.2	1.3e+02	2.8	1.2	3	21	376	394	375	396	0.94
8	16	0.023	1.4	9.1	0.1	2	23	426	447	425	447	0.96
9	16	0.0042	0.26	11.4	2.3	3	23	457	478	455	478	0.94
10	16	0.056	3.4	7.8	0.5	2	23	558	579	557	579	0.96
11	16	0.036	2.2	8.4	1.2	1	21	583	603	583	606	0.96
12	16	4.9	3e+02	1.7	0.1	9	23	692	707	684	708	0.80
13	16	0.001	0.064	13.3	4.1	2	23	720	741	719	741	0.96
14	16	0.012	0.72	10.0	0.9	1	23	751	773	751	773	0.98
15	16	6.3	3.8e+02	1.4	0.2	3	23	782	802	780	802	0.87
16	16	1.4	85	3.4	0.1	3	23	811	831	810	831	0.96

Sequence Information

Coding Sequence: ATGCTCTTCAAGGGTAACTCCTCAAGACTCCAACTGTTAATTGAGAAAATACATGCCCACAAAGAATTACCACCCGATCAGGAAGTCAAAGAAGGCGGTGAGACGGAAGGAGGAAGTTCGTCGGAGGCCAGCAGTGCTTCCTCTTGTCCGACGCCAAATTCTGCCAGCTCTCTACAAGAGTCCGATCTGGCGTATACGGTCGGAGTCACTGAGACCACCCCATATCCCTGTCATTTCTGCCATAAAGCCTTCCCAAGACTTTCCTATCTTAAGAAACATGAACAGAGCCATAGCGAGCACATGCCGTTCAGATGTGAGTACTGCCTGCGACTGTTCAAGCACAAGAGGAGTCGAGATCGACACATCAAACTGCACACCGGCGACAAGAAATATCGCTGCACCAAATGTGAAGCTGCATTCTCCAGAAGTGATCATTTAAAAATCCATATGAAGACACATGACAATCAAAAACCGTTTCAATGCACCGTCTGCAACCGGGGCTACAACACTGCAGCTGCACTTACATCGCACATGCAGATCCACAAGCGGAACGTTGACGGAACTATTGTCGGACAAGAAGCTTCAACTAATAATAATAATAATAATAACAATATTATTATTAATAACAATAATAATAGTAAGATACAAACATACAAGTGCCTGCAGTGTCATGAGGTCTTTCAGAAACCAGAAGAACTTACAGAACACATATCATCGTTGCATAGTGAGTCGATTAACAATGCGCAAAGGAAATGCAAAGATGGCATGGCAAAATCCAATTTAGCGTGCACATATTGTGCAAGTGACTTTACCACGATGGAAGCGCTACATCATCATATAAAGACTGTCCACAATACCAATCAAAGTGAAGTGAACGGTTTAAACAGCTACAACATGGTGTGCCCGCTGTGCTCCATGATCGTGCCGGTCGGCTCCTTGGAGGCTCACACGGCCACCGTGCACGGCAGCACCATCCGCACGCATGGCAACGTGGCGCCCGACCTATCCGCTTGGCACCTGGACACACCAAGCGCCACCAAGCGCCCAAGATTGCCATTTAATACATCTGAAAATTTATTACAAAAACAGCACAGAGTTGAGTACTCCCATCCGGGCGTACTGCTATGTTCGCAATGTGATGCAGCTTTGCCAGACTTTGAGTCGTTTCGTCGTCACGTGAAATGTCATCTTGAAGAACGATCTTCGCACACGTCCGGCGGTTGTACGACGGCCGAACTGGCCAAGCCGATGGCCGGTGCGAACAGCTCGACCACAGTCTGTCCTTACTGCGGCACCACACAGCCTAGCACGGAGAGTCTGCTACAGCACATCGGCACACACCTGTTGGCTCGCATCACCGACTACGGCTGTAATACTTGTTTGCGCTTGTTTTCAACTTTAGACAACCTACGAAGACATCTAATGGATTGCCATGCTTTTGTGGCGTATAGATGCTGCCTATGTTCTGATCTGTTCGAGTCAAAAGTTGCTATTGAGGTGCACTTTACAGCGAAGCATTGCAATGAGGTGAAGCAGTACCGATGCACAGCCTGTCCGAGCTTAGCGCCCCTCGCATCTGAACATGAATTCTGGTTGCACATTAAGACAGTGCATTGTAATTTTAAAATCAATTCACCAACTCCGCCAAATATTTCGTCTCCGAGACTGCTGCGCTGTGTATTTTGCAGTATGACGTTTTCCACAGAGTTAGAGATGCAGTATCACCTTTCTGTGCACACAAAGCAGTATCAATGTCCAATATGTTTAGAAGGGTTCCACGTTGAATATCTGTTGGACAAACACATGCAGTGTGCCCATGCACCGGAGACATCTAGCAGTTTGAGTGACTTGCAAGTTGACAATGGCAGCATGCAGGTGCAAACGGGCGTTCTCAATGCAAATAATGAAACCACTAGTTCTACTTCTGATGTCTCGGCCAAAAAACCTGATATTTCTCATAACAACAATAATAATAATAGTAACAATAATAACAATAATAATAATAGTAACAACAACAACAACAACAACAATAATAATAATAATAGTAAAGACTGTGGGATATGTGAAGCTGGCGATTTCGCGTCTGAAGCAGAGTTGAACGCCCACCGCAAACTTGTGCACCACTTGAAGACATCTACTGCGGCTAAAGTGAGTCTGCATTGCGCCTACTGCAAGGAGAACTGTAAATCTCGAGCCGAACTGGAAACCCACATGAAGACACACTGTCAGGGCGGCCTGGGCCCAGGTAAACACAAGTGCAACATCTGTGACGAGCTTTGCAATTCAGCTATTGCACTTGCAGAACACAAACTAACGCATTGCAAGGTGGTTCATGGAACAAAATGTATCCAATGTAAGGCAAACTTAACGGACGAGGATAGTTTCACCGCCCATCTGGGCCAGCACGGAAACGGCAGCCTGCCGGCGCCTTGTGTCATCTGCAGACAGACGTTGAACACAGAGACAGAGGTGATGCTGCATGCCCGTCTACATCTCGGCATGGAGAGTAATCATGCAGCAATCGGCCAGCATGTTTCACTAATGCATGCAGGTGCCTGCAATTCGGCCTTCAGACCTACCAAGGAGTGGAGTGAAAACAGTCTGGAATTGGCCAGTTCGTGGAAGAAAGAAGCATTATCCCAGTTATCTCATTTAAGAGTCGGATGGAACTTCCGACCAGATTTAGAGCGTCAGTACAAGGCTCATGTTCTGGCCAGACCGCCAAGTATAATTAACGAACCCAAGGCGCTGTTAGCACCATACAGCAAAGGCAAGCCAGAAATTTGTCGAACTAAACCAACTGAGCTGATCGATGCCAGGGTGGTTAAAATTGAACGAGAAGATATCTCTTACACAGAGAATAGTTCAAATTCACAACAGACTACAAATAATTGA
Protein Sequence: MLFKGNSSRLQLLIEKIHAHKELPPDQEVKEGGETEGGSSSEASSASSCPTPNSASSLQESDLAYTVGVTETTPYPCHFCHKAFPRLSYLKKHEQSHSEHMPFRCEYCLRLFKHKRSRDRHIKLHTGDKKYRCTKCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQIHKRNVDGTIVGQEASTNNNNNNNNIIINNNNNSKIQTYKCLQCHEVFQKPEELTEHISSLHSESINNAQRKCKDGMAKSNLACTYCASDFTTMEALHHHIKTVHNTNQSEVNGLNSYNMVCPLCSMIVPVGSLEAHTATVHGSTIRTHGNVAPDLSAWHLDTPSATKRPRLPFNTSENLLQKQHRVEYSHPGVLLCSQCDAALPDFESFRRHVKCHLEERSSHTSGGCTTAELAKPMAGANSSTTVCPYCGTTQPSTESLLQHIGTHLLARITDYGCNTCLRLFSTLDNLRRHLMDCHAFVAYRCCLCSDLFESKVAIEVHFTAKHCNEVKQYRCTACPSLAPLASEHEFWLHIKTVHCNFKINSPTPPNISSPRLLRCVFCSMTFSTELEMQYHLSVHTKQYQCPICLEGFHVEYLLDKHMQCAHAPETSSSLSDLQVDNGSMQVQTGVLNANNETTSSTSDVSAKKPDISHNNNNNNSNNNNNNNNSNNNNNNNNNNNNSKDCGICEAGDFASEAELNAHRKLVHHLKTSTAAKVSLHCAYCKENCKSRAELETHMKTHCQGGLGPGKHKCNICDELCNSAIALAEHKLTHCKVVHGTKCIQCKANLTDEDSFTAHLGQHGNGSLPAPCVICRQTLNTETEVMLHARLHLGMESNHAAIGQHVSLMHAGACNSAFRPTKEWSENSLELASSWKKEALSQLSHLRVGWNFRPDLERQYKAHVLARPPSIINEPKALLAPYSKGKPEICRTKPTELIDARVVKIEREDISYTENSSNSQQTTNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01301831;
90% Identity: -
80% Identity: -