Trub009896.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- LRRFIP2
- Assembly
- None
- Location
- chr9:8369342-8425854[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-104 2e-100 335.5 39.1 1 300 100 397 100 397 0.92 2 2 0.011 1.4e+02 1.1 3.0 120 171 395 446 394 459 0.84
Sequence Information
- Coding Sequence
- ATGTCAACCGGTGAACAATCAACACGTTATGTGTCTATAGTGGATTTAACCACATCAGAATGTCTATCAGATGGTTCAACAGAATCTGGTGTCTGTCTAGAAGAGGAGACACCATCTTCTGTAACATTGATACGTCTTGAAGGTAGACCACCATCAATATATGATGGTGATGGTGAAGATGAAGAAGAGAATGATGGTAATGATGATGATGTTGATGACTATGGTGACGATGACGACGATAATTGTGACAATCATTCTACTGGAAATCACCTGTTGAATGGACCGGTATCTGAACATGCGGAGGCCCGGTTGGCAGCGAAGCGGCAGGCCCGGGCCGAGGCTAGAGAGATCAGAATGAGGGAACTGGAAAGGCAGCAGAAAGAAGCAGATGAAAATGCTGACAGAATATATGATATGTATTCTGATGGTGTAACCAGAGCTGCAAGAGTTTCTGTAAACAACAGCAGGCTTTCAGCATCAAACAGTTACCAGTCTTCAAGAAGAAGTTCAGAAGATTCCCTAGAGGAAACCGCCTCTCTCAGGGATGTCAGAAGTGAACTGCGAGAAGTTGAGGACAAGTTTAGAAAGGCTATGATAGGTAATGCCCAATTAGACAACGAAAAAGCAGCTGCGGCGTATCAAGTAGAATTATATAAAGATAGGTACGAAGAATTGGAAGAAGAACATAATCAATTGCAGAGGGAACATAGGGATAAATGTAGACAGTTTGAACAGAAGAAGAGAGATGTAGCCAAGCTACAAAAAGATTTAGAAGCAACTCTTGCTGCTCTTCAAGAAAGAGATCGCCTTATTGAAGAGCAAGGGCTAGTAATTGTTGGTGGTGATACGTCATCATCTGCAACAGAAAGTGATGAAGAGGATAGTGGAGGGGGAGGCGAAAGAAAAGTCAAAGAAAAGCATCGAAGAGCGCTTGTATCTTCAGACATGGCCAAACTATTGGATTCAGTTGGGCATGGTTCACTAGATGTAAGATTGAAGAAACTTGCCTCAGAAAGGAATGAATTACAAGATGAATTGAGACATGTAAAACTTGAACTTGAAGAAGAAAGGTCTAAAAGTAACAGATTTTGTGCCAATCCGGCAGATCTTGAGGATATCCAGAGGGAAGCGAATAAACAGCTTGGTGATTATAAATTCAAACTTCAAAAAGCTGAACAAGATGTGTCCACCCTTCAGGCTAATGTTGCACGTTTAGAAGGCCAAGTTGTTCGATATAAAACAGCGGCCGAAACTTCCGAAAAATTGGAAGATGAATTAAAAGTAGAAAGAAGAAAATTACAAAGAGAGTTGCGAGAGAGTTTGGCTAGGATAGAAGAACTTGAAACCTCAAATACACACTTAGCAAAGGAGGCTGGACAAACTGAAGACTGCAAAGTCTGCTTTATTAAAAGATTTGTAGCGAAGGCTTGA
- Protein Sequence
- MSTGEQSTRYVSIVDLTTSECLSDGSTESGVCLEEETPSSVTLIRLEGRPPSIYDGDGEDEEENDGNDDDVDDYGDDDDDNCDNHSTGNHLLNGPVSEHAEARLAAKRQARAEAREIRMRELERQQKEADENADRIYDMYSDGVTRAARVSVNNSRLSASNSYQSSRRSSEDSLEETASLRDVRSELREVEDKFRKAMIGNAQLDNEKAAAAYQVELYKDRYEELEEEHNQLQREHRDKCRQFEQKKRDVAKLQKDLEATLAALQERDRLIEEQGLVIVGGDTSSSATESDEEDSGGGGERKVKEKHRRALVSSDMAKLLDSVGHGSLDVRLKKLASERNELQDELRHVKLELEEERSKSNRFCANPADLEDIQREANKQLGDYKFKLQKAEQDVSTLQANVARLEGQVVRYKTAAETSEKLEDELKVERRKLQRELRESLARIEELETSNTHLAKEAGQTEDCKVCFIKRFVAKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386350;
- 90% Identity
- -
- 80% Identity
- -