Trub003955.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- TFIP11
- Assembly
- None
- Location
- chr1:42504368-42514801[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.28 1.8e+03 -2.2 0.1 136 149 79 93 43 105 0.52 2 3 6e-82 3.8e-78 262.4 14.1 1 275 221 496 221 496 0.97 3 3 0.21 1.3e+03 -1.8 0.0 244 261 510 527 504 537 0.75
Sequence Information
- Coding Sequence
- ATGGGTTTCCAACCCGGCAAAGGGCTAGGAAAAGATCTCCAAGGGATACAAGCTCCGATAGAAGCGAAACTGAGAAAAGGCCGAGGTGCAATCGGTGCCTATGGGCCAGAAAAGTCACAAAATGTAGCAGAAGTTAAGACTGAGCCACAAAAAAGTAAAGAGAGTATTGAGAAAATATCCCAGTGGAAAAAAGGTGAGCATGGGAAAAACAAGAAAGCAAAGTATATCTATAAAAGTATTGAAGATGTCTTAGACCAGAGTTGGCAGCCACAGAGGAAAAGGGAATTTAACGAGCTTTCCAAGGTAAAGGTGATAGATATGACTGGGCCCGAACAGAGGGTGCTATCTGGGTATCATGCAATTTCTGGAAATCAGAAACCATCTGATGAATGGGACCTAAGGAAGGACAAGAAATTCAAAAACTTCGAAATGCCTGAATTGTTACATAATCTTAATCTGCTGGTAGAAATATGTGAGCAAGATATCATTGCTAAAGATCGCCAATTGAGATACAATGAAGATCGCATCGTATCATTGAAAAACGATAGAGATACCATGCAAAAAGTTGTGGATCAAGAAGAAGCAACAATTACATCGTTAGAACATGTTTTGAATGTGTTGGAATCTCTTACTGAAGGAAGTAAGGATGGCACTATGTCCTTGGATGATATTGCTAATGCCTATCAACAATTGCAGACTAATCATCCTGCAGAATATATAATGTACAACCTAGCAGGGTTAGCTCCAGGAATTCTGAAACCACTATTGAAGAAAGAGTTGGAACAATGGTCACCGTTGACAGATGCTAGAGGGCCGCTTGATCTAATCTTAAAGTGGGCTGGTCTCTTAGCAAGTGCACAAGGTGCAACATTGGCAGCGGTAGCGGGAGGCACTCAGGTTACTTTGGCTGATCCATTACATAGAATACTATGGGAAGTGTGGGCTCCTGAGATCATCAAGTCTCTTGGAAGTTGGAATGCAAAAGACCCGGCACCTATGCAAACGCTCTTTGAAACATGGGAGTCGGTGGTACCTAAATGGATACTGGACAATTTATTGCAGCAGCAGGTGATGGCTAAGCTGCAAGAGACTGTAGAGCAATGGAATCCTCTCACCGACACAATTCCAATACACACGTGGGTTCTACCATGGATGCCTCAACTTGGTAAACGTATTAGAGTATCAGTGCTTCCAGTAATAAGGCAGAAGTTAGCCACCGCGCTAACTGGGTGGCATCCTTCGGACAGTTCAGCAAGGTATATGTTACAGCCTTGGGCTACAGTCTTCACTGCACAAGAAATGGACACTTTTCTAATCAATAATATAATGCCGAAATTAGGCCAGGCTCTCGGGCAAATGTATATATCACATCAAAATCTGAATTTAGATGCTTGGAAGTGGGTGATGGAATGGAACGAGTTAGTGCGACCTCCTCTAATGGCAGATTTATTGGACCAACATTTTTTTCCGAAATGGCTACAGGTGCTTACTGTTTGGCTGAATACTTGTCCCAATTACGATCAAGTTATGGCTTGGTATTCCGGCTGGAAATCAGTAATACCGCCACATCTTCTCGAACAACAAAGGGTCAAAGATCAACTAAGAACTGCTTTAGAGTTAATGAGCAGATCAGTTGGCGGTTCAGTGTTACCTCCACCTCCACCACCGCCTCCTCCGCCAGATATATCATCTGGAAGATTTCAGGGCATGGCGGAAGCAGTGCGTACAGCAACTCAGATGGTCGAGGGATATAAAGATCTAGTCCAAAAGAGATGCGAAGAAAGAGGCATTGTATTTCATCCTTTGCCAAATAGGTATAGAGAAGGGAAACAAGTTTACCGCTGTGGAGCTGTCCAAATGTATATAGACCGCAATGTAATTTTCAATTGTGATCACAACACGGGTAATTGGGTCCCAATATCGTTGCAAGCACTTTTAGAAAAGGCAGCGAACGTCGGATGA
- Protein Sequence
- MGFQPGKGLGKDLQGIQAPIEAKLRKGRGAIGAYGPEKSQNVAEVKTEPQKSKESIEKISQWKKGEHGKNKKAKYIYKSIEDVLDQSWQPQRKREFNELSKVKVIDMTGPEQRVLSGYHAISGNQKPSDEWDLRKDKKFKNFEMPELLHNLNLLVEICEQDIIAKDRQLRYNEDRIVSLKNDRDTMQKVVDQEEATITSLEHVLNVLESLTEGSKDGTMSLDDIANAYQQLQTNHPAEYIMYNLAGLAPGILKPLLKKELEQWSPLTDARGPLDLILKWAGLLASAQGATLAAVAGGTQVTLADPLHRILWEVWAPEIIKSLGSWNAKDPAPMQTLFETWESVVPKWILDNLLQQQVMAKLQETVEQWNPLTDTIPIHTWVLPWMPQLGKRIRVSVLPVIRQKLATALTGWHPSDSSARYMLQPWATVFTAQEMDTFLINNIMPKLGQALGQMYISHQNLNLDAWKWVMEWNELVRPPLMADLLDQHFFPKWLQVLTVWLNTCPNYDQVMAWYSGWKSVIPPHLLEQQRVKDQLRTALELMSRSVGGSVLPPPPPPPPPPDISSGRFQGMAEAVRTATQMVEGYKDLVQKRCEERGIVFHPLPNRYREGKQVYRCGAVQMYIDRNVIFNCDHNTGNWVPISLQALLEKAANVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -