Basic Information

Insect: Triatoma infestans
Gene Symbol: -
Assembly: GCA_011037195.1
Location: JAAEAF010014400.1:98659-105933[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2 8.5e+02 2.7 0.1 3 23 7 27 5 27 0.90

2 14 0.12 45 6.8 0.9 1 23 303 326 303 326 0.89

3 14 0.041 16 8.2 0.3 2 23 367 389 367 389 0.96

4 14 0.00014 0.056 15.9 2.2 2 23 392 413 391 413 0.96

5 14 1.5e-05 0.0059 19.0 1.4 1 23 419 441 419 441 0.95

6 14 4.5e-06 0.0017 20.6 1.3 2 23 448 470 447 470 0.93

7 14 0.0051 2 11.0 0.8 5 23 483 501 482 501 0.96

8 14 0.00027 0.11 15.0 3.8 2 23 507 529 506 529 0.97

9 14 0.057 22 7.7 0.2 2 23 550 570 549 570 0.95

10 14 0.051 20 7.9 1.8 5 20 580 595 578 598 0.88

11 14 0.00012 0.046 16.2 0.3 1 23 606 628 606 628 0.98

12 14 9.5e-05 0.037 16.5 5.2 1 23 634 656 634 656 0.97

13 14 1.2e-06 0.00046 22.5 1.5 1 23 662 684 662 684 0.98

14 14 0.00086 0.33 13.4 9.0 1 23 690 712 690 713 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2	8.5e+02	2.7	0.1	3	23	7	27	5	27	0.90
2	14	0.12	45	6.8	0.9	1	23	303	326	303	326	0.89
3	14	0.041	16	8.2	0.3	2	23	367	389	367	389	0.96
4	14	0.00014	0.056	15.9	2.2	2	23	392	413	391	413	0.96
5	14	1.5e-05	0.0059	19.0	1.4	1	23	419	441	419	441	0.95
6	14	4.5e-06	0.0017	20.6	1.3	2	23	448	470	447	470	0.93
7	14	0.0051	2	11.0	0.8	5	23	483	501	482	501	0.96
8	14	0.00027	0.11	15.0	3.8	2	23	507	529	506	529	0.97
9	14	0.057	22	7.7	0.2	2	23	550	570	549	570	0.95
10	14	0.051	20	7.9	1.8	5	20	580	595	578	598	0.88
11	14	0.00012	0.046	16.2	0.3	1	23	606	628	606	628	0.98
12	14	9.5e-05	0.037	16.5	5.2	1	23	634	656	634	656	0.97
13	14	1.2e-06	0.00046	22.5	1.5	1	23	662	684	662	684	0.98
14	14	0.00086	0.33	13.4	9.0	1	23	690	712	690	713	0.96

Sequence Information

Coding Sequence: ATGGAGAGCCATTTGGCATGTCCAGTATGTACTCTCTATTTGAGAGAGGGTATGTCCATGCAAAGTCATTTAAATACCCATCCCAAGGATCAAGTAATAGATGCCTTGGTCAGAGTTTATACTACAGAAAGGACCACAAATTTACAACCGGAACCTCAACCTCCAGCAATTTTTAATCCTTTCCAAGTAGTGTCTGAGGAGCATATAATTCTTGGGCGACAACAGGTGACTAACATCATCCACACTCCTCTTCtaccctatcacttttatcaaCAGCAACCACAACCAGTAGTGAGTGATTATATGGGTCAAACCAGTGATAATGCTCGTGGATCAGAATCTATACTGAGTTTAGGACAAAATGGATCTGGCAGTGGATCAGGACTTCTTACTACACTTGTCAATGTTCAAGATGAAGGAGCTGTTGAAATGAATGTTCTTAATGATAACGGTAAATGTTATATGGATGTACAGAACACGGCAGTTACTCCAATCAGTCAGCGTTCTGAGCTCTCAATAAAAGCAGACATTCCAACTCAAGTAAGACCCGATGAAAACGCAGATCAGTATATTACCTCTGATTGTGACTACCAAGATGAAGATGCCAGGCATAGCGATGACTTGGATGACCCAGgcTATGGTAtagatgaaaattcaaaacttaCTGCGGATGAACGAAGTTGCCTGTCTAATGTACCAACTGGCGATTGTTCTCCACAGAGAATCGATCTTTCGGGCAATAGTAGCTTGCATTCTACTAACAATTCTGTCTGGCTCCGGGAAaaTCTGAATTCTACCGGACCATATGAAAATGCTGGAGTAAAAGATATTGATCCTGCTAATGCAGTGGTCACTACATGGGAACCTTCGGCAGCTGCAGAGAACAAACCGGACGTTAAGAAAAGATATCAGTGTTTATATTGTGAGGAAGTTTTTACATGTCCTAAAGAAAGGAGAGTACATGTAGCATCATTGCATTGCAGTAACGAGGCTAAGTCAAAGAAAGGCGAAGTAATTAGCACTAAATGTGACATTAAGCTTCCCGCATCTAAGGAGCTGAAGgctCAGACTAGATTAGTACGTAAGAAGATCACTAGACAGTGCCATGTTTGCTTGGAAGAATTTGCAACGTTGCAAGCATACAGCGAGCATATATCCAAAATTCATCCATTAGAATGTCGGACATGTGGCAAGACATTCCATACTAAAGGAGGTTTAACAACTCACTCAAAAATTCATATAGCTTTGAAGCCTCATGCTTGCACCCTTTGCCCAAAAACATTCATTACAAATcagaaattaaaagaacataTGAATGGACATACTGGCAATAGTCCCATTCAATGTACAATGTGTGATCGAAAATTCAAAAGATATTCCAATTTGAAACAACATAAAGACATTGCTCACTTctctgtaaagaaaaaaattaaagaatactTTTGTGAATGTGGTGAAAcgtttttttcaaagaaaaaacttgAATGGCATAAAGAAACGCACGCAGATAAACCAAAACAGTGTATGCATTGCAgtgaaaaatatgtacatagtGCAAGTTTGACAAGGCATATAAGGAAAGCTCATGATAATGAGTATATACCTCCCACTTCCGATGGTAAACCCGATAGTAAGAGGAAAAATGTTGTCTGCTCTATTTGTAATATGACTTTTTTAGATTCATCTATACGTGCGCATATGAAACAACATGGTACTATAAAACAATTTGGTTGTATTGTTTGTGGTAAAAAATTCCATACTAAGTGGAATTTATCATTACACCGATGGACTCATGCTTCTCGTATGTCTAAACCTTATAAATGTACAATGTGCAAGGGTGCTTTCTTAAGACAGTCAGAATTACAAGCCCATATCCGTGCCCATTATGGCAATAAGCCATACACATGTAACCATTGTGGTATGCAATTTAATCGTAAACATAATTGGTTGAGGCACGAAAAGGAACATCTAATGGAAAAGAAATACACATGCGAAGAATGTGGCAAATCATTTCATAGGAATTATTATCTAGTCGATCATGCCAGGGTACACACAGGTGTAAAACCATATTCATGTCATATCTGTAATAAAACTTCATCAACCAAATCTAATCATAATAAACATGTAAGGACCCATCATGCCCGTGAAGCTGTTAACACTGAAGcgtga
Protein Sequence: MESHLACPVCTLYLREGMSMQSHLNTHPKDQVIDALVRVYTTERTTNLQPEPQPPAIFNPFQVVSEEHIILGRQQVTNIIHTPLLPYHFYQQQPQPVVSDYMGQTSDNARGSESILSLGQNGSGSGSGLLTTLVNVQDEGAVEMNVLNDNGKCYMDVQNTAVTPISQRSELSIKADIPTQVRPDENADQYITSDCDYQDEDARHSDDLDDPGYGIDENSKLTADERSCLSNVPTGDCSPQRIDLSGNSSLHSTNNSVWLRENLNSTGPYENAGVKDIDPANAVVTTWEPSAAAENKPDVKKRYQCLYCEEVFTCPKERRVHVASLHCSNEAKSKKGEVISTKCDIKLPASKELKAQTRLVRKKITRQCHVCLEEFATLQAYSEHISKIHPLECRTCGKTFHTKGGLTTHSKIHIALKPHACTLCPKTFITNQKLKEHMNGHTGNSPIQCTMCDRKFKRYSNLKQHKDIAHFSVKKKIKEYFCECGETFFSKKKLEWHKETHADKPKQCMHCSEKYVHSASLTRHIRKAHDNEYIPPTSDGKPDSKRKNVVCSICNMTFLDSSIRAHMKQHGTIKQFGCIVCGKKFHTKWNLSLHRWTHASRMSKPYKCTMCKGAFLRQSELQAHIRAHYGNKPYTCNHCGMQFNRKHNWLRHEKEHLMEKKYTCEECGKSFHRNYYLVDHARVHTGVKPYSCHICNKTSSTKSNHNKHVRTHHAREAVNTEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01301787;
90% Identity: iTF_01301787;
80% Identity: -