Basic Information

Gene Symbol
Bgb
Assembly
GCA_011037195.1
Location
JAAEAF010008149.1:67544-71632[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-15 3.5e-10 41.8 0.4 1 28 31 58 31 66 0.93
2 2 0.089 6.7e+03 -1.4 0.0 41 47 111 117 76 127 0.53

Sequence Information

Coding Sequence
ATGTTGTCTATGAACGATCCGGCTGTGGGCATGATCCCATTCGATAGTATCGGCTTATATGAACAACCAAAACCACGGTTTATTTTTAAGATGCCACGAGTTGTACCAGATCAAAAGGCGAAATTCGAATCTGATGAACTTTTCAGGAGACTAAGCAGAGAATCTGAGtttcaagttTTTAATCGAGCCAGGCACTTTCTAGCAAATGCTGACGATGTTGTTCTGGTCGGAAGGACATTTCGGGCCTTAGAAGAATGTTTTGAACAATTAGAAAGAAGTGTAGAAGAGATGGGATTGCAACTGAATTACTCCAAAACCAAGTATATGTTGTCCTCAAGATTTGATAATCGTATATGTCGATCCCAACATGTGCAGATTAGTGGCACATAG
Protein Sequence
MLSMNDPAVGMIPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEFQVFNRARHFLANADDVVLVGRTFRALEECFEQLERSVEEMGLQLNYSKTKYMLSSRFDNRICRSQHVQISGT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-