Tvap014123.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:27620783-27623302[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.072 40 4.4 1.4 18 40 247 266 239 269 0.77 2 21 0.032 18 5.5 2.0 8 38 266 296 259 300 0.76 3 21 0.057 32 4.7 2.3 5 29 291 314 287 322 0.80 4 21 0.0012 0.67 10.0 2.1 5 40 315 350 314 354 0.81 5 21 0.064 35 4.5 1.6 18 29 359 370 351 378 0.83 6 21 0.00062 0.34 11.0 3.0 5 40 371 406 370 409 0.78 7 21 0.0083 4.6 7.4 1.6 16 40 413 434 406 437 0.85 8 21 0.066 36 4.5 1.5 17 39 442 461 434 464 0.73 9 21 0.038 21 5.3 2.1 15 40 468 490 460 492 0.81 10 21 0.025 14 5.9 3.3 7 38 489 520 483 522 0.77 11 21 0.013 7.2 6.7 1.7 17 40 526 546 519 549 0.85 12 21 0.18 98 3.1 3.2 17 29 554 566 545 576 0.80 13 21 0.04 22 5.2 0.7 14 39 579 601 568 604 0.73 14 21 0.0029 1.6 8.8 1.6 13 37 606 631 595 633 0.75 15 21 0.008 4.4 7.4 2.2 15 30 636 652 625 661 0.73 16 21 0.16 87 3.3 2.9 17 29 666 678 657 686 0.80 17 21 0.016 8.8 6.5 1.1 13 41 690 715 679 717 0.76 18 21 0.089 49 4.1 3.2 14 35 719 741 711 745 0.72 19 21 0.14 78 3.4 3.2 13 29 746 762 739 770 0.77 20 21 0.083 46 4.2 0.9 13 34 774 796 767 800 0.69 21 21 0.0009 0.5 10.5 4.7 5 39 795 834 791 837 0.75
Sequence Information
- Coding Sequence
- ATGAATCCGGGGACAGCAAACGTTGATCAGGAGATGTTTTGTCCTGAGTTGAAGTCTCTCTATTATTCCACCAAAGATAATGCTCTGAAAAAATATATTACTTTTAACGCTGGGAGTGCAATCAATGATGAGACTCTTATCATGAAGGAAGAAGAAGTAGAAGCATGGTTTGGGAAGAAAGTGAAAATAGTTTTGGAAAGAGTGCACGAGGCAAAAAGGGAAAACACAGAAACTCATCATGATAACTTTTGGAGTAACAGAAATCATTCTGAATCTGCTGCACCTACCTCCCAGTTCTCCTACGAGAATGAAATTTTGGACGAAAGAATAAAAAAAGAGAACGTCACCTATGAGGAGGACACTGGAGAATTAACTGAATTTAATTATCCAATAACAGATGATTTCAATTGCCTGAAAGAAAGAGATTGCAAAGATAATGAATTTAACAATTTTCAGTTTATATCTACGAGTGTTAAGTCAGAACCGTTTGAGGACGACTGTGGATCACTGCTTGAGACCGTTAGTGAAAGTTTAACAAACTTGCCATGTAAGCGTGAAGACTTTATATTCCCTGGACAATTGGAAAACAAAAGCTTAAGAAGTCAGTCTCAACCTGATACTAACCAGGTTTTGTACGGACCAATAAAATGGGAAACTGTTCATATGAGTGAGAATGCCGTTGGAGATCCGTTGGAACTTGAGAAAGAGATCCAGGTGCATACTGTGAAAGAACTCTTTGAATGCACCCATTGCAACAAAAAGTTTCCTGATAACAGTGCTTTGACAAACCACATGCGGGTGCATACTGAAGAAAAACCCTTTGTTTGCACCCTTTGCAGCAAGAAATTTTCTATGAAATTCAATTTGACTAAACACATCCTGGCACATACTGAGGAAAAACCCTATGAATGCGCCCATTGCAGCAAAAAGTTTTCAGACAAAAAATATTTTACCGTACACACCCGGCTTCACACTGGAGAAAAACCCTTTGTTTGCACCTATTGCAACAAGAAATTTTCTCTGAAAAGCTATTTGACTCAACACTTGAAGGTGCATACTGAGGGAAAACCCTATGAATGCGCCCATTGCAGCAAAAAGTTTTCAAACAAAAACTATTTTACCGTACACACCCGGCTTCACACTGGAGAAAAACCCTTTGTTTGCACCCATTGCAACAAGAAATTTTCTCTGAAAGGCAATTTGACTCAACACTTGAAGGTGCATACTGGAGAAAACCCCTTTGTTTGCACCCATTGCAACAAAAAGTTTTTTGAAAAATCTGCTTTGACTAGACACATGCGGGTGCATACTGGAGAAAAACCCTTTGTTTGCACCCATTGCAGCGAGAAATTTTCTGAGAAAAGCAAATTGACTGGACACATGCGGGTGCATACTGGAGAAAACCCCTTTGTTTGCACCCATTGCAGCAAGAAATTTTCTTTTAGAAGCCAATTGACTCAACACATCCGGTTGCACACTGGAGAAAAACCCTTTGTTTGCACCCATTGCAACAAGAAATTTGCTCTGAATGGCAGTTTGACTAAACACTTGAAGGTGCATACTGGAGATAACCCCTTTGTTTGCACCCATTGCAACAAAACGTTTTTTAAAAAATCTGCTTTGACTAGGCACATGTGGGTGCATACTGGGGAAAAACCCTTTGAATGCGCCCATTGCTGCAAAAAGTTTTCGCGAAAAGTCCTTTTGGCCTATCACATCCGGATGCATACTGGGGAAAACCCCTTTGAATGCGCCCATTGCAGCAAGAAATTTTCTTTTAGAAGCCAATTGACTGATCACATCCGGTTGCACACTGGAGAAAAACCCTTTGTTTGCACCCATTGCAGCAAGAAATTTTCTAGGAGAGGCGATTTGACTAAACACTTGCTGGTGCATACAGGGGAAAAACCCTTTGTTTGCACCCATTGCAACAAAAAGTTTTCTTATGAAAGTGATTGGACTAGGCACATGTGGGTGCATACTGGGGAAAAACCCTTTGAATGCGCCCATTGCTGCAAAAAGTTTTCGCGAAAAGTCCTTTTGGCCTATCACATCCGGATGCATACTGGGGAAAACCCCTTTGAATGCGCCCATTGCAGCAAGAAATTTTCTTTTAGAAGCCAATTGACTGAACACATCCGGTCGCACACCGGAGAAAAACCCTATGTTTGCACCCATTGCAGCAAGAAATTTTCTAAGAGAGGCGATTTGACTAAACACTTGCAGTTGCATACTGGGGAAAAACCCTTTGAATGCGCCCATTGCTGCAAAAAATTTTCGCGAAAAGACCTTTTGGCTGGTCACATCCGGATGCATACTAGGGAAAACCCATTTGAATGTGCCCATTGCAGCAAGAAATTTCCTTCTAGAGGCAAATTGACTGAACACTTCCGGTTGCACACTGGAGAAAAACCCTTTGTTTGCACCCATTGCAGCAAGAAATTTTCTAGGAGAGGTGATTTGACTAAACATTTGCAGGTGCATACTGGGAAAAACCATATGCAACATCAAGTTTTCTGA
- Protein Sequence
- MNPGTANVDQEMFCPELKSLYYSTKDNALKKYITFNAGSAINDETLIMKEEEVEAWFGKKVKIVLERVHEAKRENTETHHDNFWSNRNHSESAAPTSQFSYENEILDERIKKENVTYEEDTGELTEFNYPITDDFNCLKERDCKDNEFNNFQFISTSVKSEPFEDDCGSLLETVSESLTNLPCKREDFIFPGQLENKSLRSQSQPDTNQVLYGPIKWETVHMSENAVGDPLELEKEIQVHTVKELFECTHCNKKFPDNSALTNHMRVHTEEKPFVCTLCSKKFSMKFNLTKHILAHTEEKPYECAHCSKKFSDKKYFTVHTRLHTGEKPFVCTYCNKKFSLKSYLTQHLKVHTEGKPYECAHCSKKFSNKNYFTVHTRLHTGEKPFVCTHCNKKFSLKGNLTQHLKVHTGENPFVCTHCNKKFFEKSALTRHMRVHTGEKPFVCTHCSEKFSEKSKLTGHMRVHTGENPFVCTHCSKKFSFRSQLTQHIRLHTGEKPFVCTHCNKKFALNGSLTKHLKVHTGDNPFVCTHCNKTFFKKSALTRHMWVHTGEKPFECAHCCKKFSRKVLLAYHIRMHTGENPFECAHCSKKFSFRSQLTDHIRLHTGEKPFVCTHCSKKFSRRGDLTKHLLVHTGEKPFVCTHCNKKFSYESDWTRHMWVHTGEKPFECAHCCKKFSRKVLLAYHIRMHTGENPFECAHCSKKFSFRSQLTEHIRSHTGEKPYVCTHCSKKFSKRGDLTKHLQLHTGEKPFECAHCCKKFSRKDLLAGHIRMHTRENPFECAHCSKKFPSRGKLTEHFRLHTGEKPFVCTHCSKKFSRRGDLTKHLQVHTGKNHMQHQVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478327;
- 90% Identity
- iTF_01478327;
- 80% Identity
- iTF_01478327;