Tvap014597.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:53034786-53037288[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2.2 1.2e+03 -0.4 2.0 11 39 241 265 226 269 0.78 2 20 3.7 2.1e+03 -1.1 3.0 17 38 302 326 291 330 0.64 3 20 0.032 18 5.5 3.3 13 41 328 353 321 355 0.82 4 20 0.0071 3.9 7.6 2.7 17 41 360 381 353 383 0.85 5 20 0.011 6.3 6.9 5.1 13 41 384 409 377 411 0.82 6 20 0.0033 1.8 8.6 0.6 17 41 416 437 410 439 0.88 7 20 0.088 48 4.1 0.7 15 41 442 465 437 468 0.81 8 20 0.046 25 5.0 5.6 11 41 467 493 459 495 0.74 9 20 0.027 15 5.7 3.7 17 41 500 521 494 523 0.79 10 20 0.0036 2 8.5 0.7 17 41 528 549 522 551 0.88 11 20 0.024 13 5.9 3.7 17 41 556 577 550 579 0.78 12 20 0.0053 2.9 8.0 1.7 15 41 582 605 574 607 0.85 13 20 0.081 44 4.2 0.5 15 41 610 633 605 635 0.80 14 20 0.73 4e+02 1.2 1.3 13 37 636 661 629 663 0.68 15 20 0.15 81 3.4 6.8 14 41 665 689 654 691 0.81 16 20 0.0018 0.98 9.5 2.0 14 38 693 718 689 722 0.85 17 20 0.0046 2.5 8.2 7.3 7 41 715 745 713 747 0.84 18 20 0.019 10 6.2 3.2 17 38 752 774 746 775 0.88 19 20 0.00084 0.46 10.6 1.1 17 41 780 801 775 803 0.87 20 20 0.052 29 4.8 2.9 17 30 808 822 802 831 0.72
Sequence Information
- Coding Sequence
- ATGGAAGATTTACGGTCATTCAAGGTAGAGAGCGATCTAATGAATTATGAATCTCTTCATGACCCCCTTGTCCATCACAAGAGTCACGATGATACTACAGCTTCTGATTTATTTAATGTGAATCATATTGCGACTGGACCAGTCAAAATAGAGAATTATTTCATCCTTGAAGAGGACACAGGAGAAGTGGTTTACTGCAACCCAAATCTAGACGTTGAGTTGTCTCACCCAGCAGAAAGAGATGTGAAGGATATTGAACTCAGCAATGTTCAGTTCTTATCGACAAGTATAAAATTGGAAACAGATCAGAATGAAGGAAAAGACATTGTCAAGCAAGTTATTAGTAATTTCACATGTTTCCAGAAGGAGGAAGGAAATGATGACCTCTTTGATGAAAAAGAAAAAATGGATGACACATTCAGGATGCATCCTGAGATTATCCAAGGTTATTCGGATATCAAATCAGAACCTAGTCCTATGAGTGAGGATGCTATGGACGATGTGTCAGAGATCAAGGGAGAAATCTTAAGTAAATCAACCAATGCAGAGGAAACGTTGAGCACTGCCGCAGCCAGCCTTGAGCTTTTGAAGAGAGATCAACAATCAGCACATCAAATGATGTCTGACTCACAATCAGAGAAAAAAGTTTTAACCTATACAGACAGTTTGAGCTTCAGTCATGCTTCAGAGGATGAATTAAACGGATATGCAAAGAAACATATTAGCGAAGGACATTTTGTGTGCACTCTTTGCAATTTAGATTTTTCCAACCAATGCACTCTGAGAAGACATTTCAGAATGTGTAACAAACGTAATCTCTTTCCACGTGCCATCTGTGCTACAATATTTATTCGGGAAAGCTCTTTAAAATCGAACGTTAGTAGACATAGTGGGGAAAAGCCCTTTGAATGCTCTCAATGTGATAAAAATAAAAAATTTTCTCAGAAACACCACCTTAGTAGCCACCTCAGAACACATACTGGGGAAAAACTATTTGAATGCACACACTGTGAAGCAAAATTTGGTGATTCAAACACTCTTAAAAAACATATCAGAACACATACTGGGGGAAAGCTCCTTGAGTGCTCTCACTGTGATAAAAAATTTTCTCGTAAAGAATATCTTATTAAGCACATCAGAACACATACTGGGGAAAAACCCTTCAAATGCACTCACTGTGATAAAAAATTTTCTCAGAAAAACCGTCTTATTATCCACCTCAGAACACATACTGGGGAAAAGCCCTTTGAATGCTCTCACTGTGATAAAATATTTTCTGATAAATGGAATCTTCAGAGACACATCAGAACACATACTGGGGAAACCCCCTTTCGATGCACATACTGTGATGCAAAATTTTCTCTTAAAGAATATCTTATTAAGCACATCAGAACACATACTGGGGAAAACCCCTTCAAATGCACTCACTGTGATAAAAAATTTTCTCAGAAAAACCATCTTATTATCCACCTCAGAACACATACTGGGGAAAAGCCCTTCAAATGCACTCACTGTGATAAAAAATTTTCTCAGAAAAACCATCTTATTATCCACCTCAGAACACATACTGGGGAAAAGCCCTTTGAATGCTCTCACTGTGATAAAATATTTTCTGATAAATGGAATCTTCAGAGACACATCAGAACACATACTGGGGAAAACCCCTTCAAATGCACTCACTGTGATAAAAAATTTTCTCAGAAAAACCATCTTATTATCCACCTCAGAACACATACTGGGGAAAAGCCCTTTGAATGCTCTCACTGTGATAAAATATTTTCTGATAAATGGAATCTTCAGAGACACATCAGAACACATACTGGGGAAACCCCCTTTCGATGCACATACTGTGATGCAAAATTTTCTCTTAAAGAATATCTTATTAAGCACATCAGAACACATACTGGGGAAAAACCCTTTAGATGCCCATACTGTGATGACAAATTTTCTCTTAAAGAATATCTTACTAAGCACATCAGAACACATACTGGGAAAAAGCCCTTTGAATGCTCTCACTGTTGTAAAAAATTTTCTGATAAAGGGAATCTACAGAGGCACATGAGAACACATACTGGGGAAACGGCCTTTGAATGCTCTCACTGTGATAAAAAATTTTCTCAGAAACTCTACCTTAGTAGCCACCTCAGAACACATACTAGGGAAAAAACCTTTGAATGCACTCACTGTGATAAAAAATTTTCTCAGCAACACCATCTGATTAGGCACCTCAGAACACATACTGGGGAAAAACCCTTTGAATGCTCTCACTGTGATAAAAATTTTTCTCAGAAATACCATCTTACTATCCACCTCAGAACACATACTGGGGAAAAGCCCTTTGAATGCTCTCACTGTGAAAAGAAATTTTCTGATAAAGGGAATCTTCAGAGACACATGAAAACACATACTGGGGAAAAGCCCTTTGAATGCTCTCACTGTGAAAAGAAATTTTCTAAGAAAATCATTCTTAATAAGCATCTCAGAACACATACTATTGTAAAAC
- Protein Sequence
- MEDLRSFKVESDLMNYESLHDPLVHHKSHDDTTASDLFNVNHIATGPVKIENYFILEEDTGEVVYCNPNLDVELSHPAERDVKDIELSNVQFLSTSIKLETDQNEGKDIVKQVISNFTCFQKEEGNDDLFDEKEKMDDTFRMHPEIIQGYSDIKSEPSPMSEDAMDDVSEIKGEILSKSTNAEETLSTAAASLELLKRDQQSAHQMMSDSQSEKKVLTYTDSLSFSHASEDELNGYAKKHISEGHFVCTLCNLDFSNQCTLRRHFRMCNKRNLFPRAICATIFIRESSLKSNVSRHSGEKPFECSQCDKNKKFSQKHHLSSHLRTHTGEKLFECTHCEAKFGDSNTLKKHIRTHTGGKLLECSHCDKKFSRKEYLIKHIRTHTGEKPFKCTHCDKKFSQKNRLIIHLRTHTGEKPFECSHCDKIFSDKWNLQRHIRTHTGETPFRCTYCDAKFSLKEYLIKHIRTHTGENPFKCTHCDKKFSQKNHLIIHLRTHTGEKPFKCTHCDKKFSQKNHLIIHLRTHTGEKPFECSHCDKIFSDKWNLQRHIRTHTGENPFKCTHCDKKFSQKNHLIIHLRTHTGEKPFECSHCDKIFSDKWNLQRHIRTHTGETPFRCTYCDAKFSLKEYLIKHIRTHTGEKPFRCPYCDDKFSLKEYLTKHIRTHTGKKPFECSHCCKKFSDKGNLQRHMRTHTGETAFECSHCDKKFSQKLYLSSHLRTHTREKTFECTHCDKKFSQQHHLIRHLRTHTGEKPFECSHCDKNFSQKYHLTIHLRTHTGEKPFECSHCEKKFSDKGNLQRHMKTHTGEKPFECSHCEKKFSKKIILNKHLRTHTIVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478324;
- 90% Identity
- iTF_01478324;
- 80% Identity
- iTF_01478324;