Tvap014758.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:4657756-4660134[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0002 0.11 12.6 2.0 17 41 235 256 232 258 0.92 2 19 0.0042 2.3 8.3 3.3 4 41 279 312 277 314 0.84 3 19 3e-05 0.017 15.2 1.9 18 41 320 340 315 342 0.91 4 19 0.0048 2.7 8.1 2.6 17 41 347 368 341 370 0.88 5 19 0.015 8.5 6.5 3.7 5 41 364 396 361 398 0.84 6 19 0.043 24 5.1 4.3 15 41 401 424 393 425 0.84 7 19 0.0013 0.71 10.0 4.0 2 40 417 451 416 454 0.90 8 19 0.58 3.2e+02 1.5 2.7 17 41 459 480 451 482 0.82 9 19 0.0042 2.3 8.3 3.1 13 41 483 508 476 510 0.84 10 19 0.21 1.2e+02 2.9 5.0 18 41 516 536 512 538 0.89 11 19 0.015 8 6.6 5.0 13 41 539 564 532 565 0.81 12 19 0.00092 0.5 10.4 3.5 6 41 561 592 560 594 0.89 13 19 0.015 8.5 6.5 6.4 3 41 586 620 584 625 0.76 14 19 0.019 10 6.2 4.1 5 40 616 647 612 650 0.84 15 19 0.09 49 4.1 2.8 17 41 655 676 647 678 0.81 16 19 0.11 61 3.8 1.0 9 28 676 694 672 705 0.75 17 19 0.0053 2.9 8.0 2.8 14 41 708 732 697 734 0.84 18 19 0.0036 2 8.5 4.0 18 41 740 760 735 762 0.91 19 19 0.0043 2.4 8.3 2.4 17 41 767 788 761 790 0.88
Sequence Information
- Coding Sequence
- ATGATGATCCAGATTCCTCTGGTCTGGCTGGGATCAAAGTCCGGAACTCAGTCCACTTCAAACATTCTTGCGCAGAATTATGTCACTTTCAACTCAATAGAGGGAGGCAAACACAGGACTCTAAAGATGAAGGAAGAAAATGTGGAAGCGTATTTTGGGAAGCAGCTAAAAATCGTTCTGGAAAGAGTGGACAAGGTAAAAACGGGAGACGGGACACCAGAGTCAGCTCATCAAAACACCGTTCGCAGGAACTTAAATCATCGTGAAACTGCAGTGATCGATTCAAGGTATTTGTGCGATAACAGTTTAATGAAAGGGGAGATAAAATTGGAGAACCATCTCATCTGGGAAGAGGATACGGGAATGATGTTTGATCGTGAAAATCCATCAGAGGGAACCGAAGCATTATTGGAAGAAACGGATGACAAAAATATTGAATTGGGTGACATTCGGTTCTTATCTACAAGTATTAAATTGGAACCAAACTGGGACGATAATGAGGCCACCCTACCAGCTTTTTTAACTACTTTCACTAGTTCCCAGAAGCTGAAAGAAATTCATATTTTTCAGGACGAAAATAGGAAGGAAAACTGTAAAAGTGCATCTCAACAAGCAATCACGCAATCTTGTTTAGATACACAAATAAAATCAGAGACTTTTCATATTGGAACTAACAGAAATGCTGTTGCTTATAATATACCAATTGAATGTTCGCATTGTAATGCAAAATATTCATATAATAGCGCCTTAAAAAGACACATCAGGACACATACCGGTGAAAAACCTTTCAAATGGTCTCAGTGTGATGCAACATTTTCTGAAAAAGGCTCACTAAAAAAACACATCAGGACACATACTGGAGAAAAACCTTTTGAATGTTCCCATTGTAATGCAAAATTTTCTCTTAATAGCTCACTAAAAAGACACATCAGGACTCATAATGGAGAAAAACCTTTTGAATGTTCTCATTGTAATGCTAAATTTTCCTATAAAAGCAATTTGATACAACACATCAGGACACATACCGGTGAAAAACCTTTCAAATGTACTCATTGTAATGCTAAATTTTCTGTCAAAGGCAATCTGAGAAGACATGTGCGGTCACATACCCGTGAAAAACCTTTCAAATGTACTCATTGTGATGCAAAATTTTCTGAAAAAAGCTCATTAAAAATACACATCAGGACACATACCGGTGAAAAACCTTTTGAATGTTCTCATTGTAATGCAAAATTTTCTCTAAAAAGCTCACTAAAAAAACACATTAGAACACATACTAGAGAAAAACCATATGAATGTTCGCATTGCAATGCTAAGTTTTCTTTCAAAGGCAATCTGAGAACACACTTGAGGGTACATACCGGTGAAAAACCTTTTGAGTGCACATGTTGCCATGCCAAGTTTGCTCAAAGAAGCACTTTGAGTGTTCATCTAAAGACACATTCTGACGAAAAACCTTTTGAATGTTCGCATTGTAATGCAAAATTTTCTCTTAATAGCTCACTAAAAAGACACATCAGGACTCATAATGGAGGAAAACTTTTTGAATGTTCTCATTGCAATGCTAAATTTTCCTGTAAAAGCTATTTGATAAAACACATCAGGACACATACCGGTGAAAAACCTTTCAAATGTACTCATTGTAATGCTAAATTTTCTGTCAAAGGCAATCTGAGAAGACATGTGCGGTCACATACCCGTGAAAAACCTTTCAAATGTACTCATTGTGATGCAAAATTTTCTGAAAAAAGCTCATTAAAAAGACACATCAGGACACATACCGGTGAAAAACCTTTTGAATGTTCTCATTGTAATGCAAAATTTTCTCAAAAAAGCTCACTAACAAAACACATTAGAACACATACTAGAGAAAAACCATATGACTGCTCGCATTGCAATGCTAAGTTTTCTTTCAAAGGCAATCTGAGAACACACTTGAGGGTACATACCGGTGAAAAACCTTTTGAGTGCACGTGTTGCCATGCTAAGTTTGCTCGAAAAGGCAATTTGAGTGTTCATTTACAGACACATTCTGACGAAAAACCTTTTGAATGTTTGCATTGTAATGCAAAGTTTCGTTTAAAATCCCAACTGGACGCACACATTATTACACATACTGGTGAGAAACTTTTTGAATGTTCGCATTGTAATGCAAAATTTTCTCTTAATAGCTCACTAAAAAGACACATCAGGACTCATAATGGAGAAAAACCTTTTGAATGTTCTCATTGCAATGCTAAATTTTCCTGTAAAAGCAATTTGATAGAACACATCAGGACACATACCGGTGAAAAACCTTTCAAATGTACTCATTGTAATGCTAAATTTTCTGTCAAAGGCAATCTGAGAAGACATGTGCGGTCACATACTCGTGAATAA
- Protein Sequence
- MMIQIPLVWLGSKSGTQSTSNILAQNYVTFNSIEGGKHRTLKMKEENVEAYFGKQLKIVLERVDKVKTGDGTPESAHQNTVRRNLNHRETAVIDSRYLCDNSLMKGEIKLENHLIWEEDTGMMFDRENPSEGTEALLEETDDKNIELGDIRFLSTSIKLEPNWDDNEATLPAFLTTFTSSQKLKEIHIFQDENRKENCKSASQQAITQSCLDTQIKSETFHIGTNRNAVAYNIPIECSHCNAKYSYNSALKRHIRTHTGEKPFKWSQCDATFSEKGSLKKHIRTHTGEKPFECSHCNAKFSLNSSLKRHIRTHNGEKPFECSHCNAKFSYKSNLIQHIRTHTGEKPFKCTHCNAKFSVKGNLRRHVRSHTREKPFKCTHCDAKFSEKSSLKIHIRTHTGEKPFECSHCNAKFSLKSSLKKHIRTHTREKPYECSHCNAKFSFKGNLRTHLRVHTGEKPFECTCCHAKFAQRSTLSVHLKTHSDEKPFECSHCNAKFSLNSSLKRHIRTHNGGKLFECSHCNAKFSCKSYLIKHIRTHTGEKPFKCTHCNAKFSVKGNLRRHVRSHTREKPFKCTHCDAKFSEKSSLKRHIRTHTGEKPFECSHCNAKFSQKSSLTKHIRTHTREKPYDCSHCNAKFSFKGNLRTHLRVHTGEKPFECTCCHAKFARKGNLSVHLQTHSDEKPFECLHCNAKFRLKSQLDAHIITHTGEKLFECSHCNAKFSLNSSLKRHIRTHNGEKPFECSHCNAKFSCKSNLIEHIRTHTGEKPFKCTHCNAKFSVKGNLRRHVRSHTRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478326;
- 90% Identity
- iTF_01478326;
- 80% Identity
- iTF_01478326;