Tvap012902.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trialeurodes vaporariorum
Gene Symbol
tfip11
Assembly
GCA_011764245.1
Location
HIC:26357613-26377141[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-86 1.5e-82 277.3 23.3 2 275 474 742 473 742 0.97
2 2 0.096 8.7e+02 -0.7 0.0 157 190 754 786 748 793 0.79

Sequence Information

Coding Sequence
GTTGGCACTAATGGATTCGTTATATTTCGTATTTTTGAGGTTATAACAGTATTGATTGTAAATATTTTTATCCTTTGATATTTTGTTAGAACTTTAGAAATAAGTACCGCAAACTTCGTTGAAAAATCAATATGTCATTCTTGTCTTTGGTTTGCCCTCCTATGTGTTTCATTTGTAACATTTTTATGTTTGAAAACTTGTGAATGAGTGCAGTTTTTTTGTTCCGGCAGCTTCAGACATCCCTCAAACATGTCTGATAACGAAGTCGAACGATTTGAAGTCACCGATTACGACCTCGACAACGAATTTAATCCCAACAGACCTCAGAGAAGATTGACCAAGAATCAAAGAATTTACGGCATTTGGGCAGATGACGAAGATGGAAGCGATGATGGTGCGCCAATGGTTGGTTTTAAAGGGACCGGTAAAAGGAGTAAGAATTATACGGCCCCTGTTAGTTTTATTGCTGGTGGAGTGCAACAGGCCGGCAAGGATAAAGCTATCAAAGAGGACGACCTGAAGAAAAGTGGTCCAAGCACCCAGATGCGTGAGTCTCCTAGAAGGAGGCATTCATCCTCTAGCGAAGGAGAATCAGCTTCTTTCAAAACATCTAATTTCACTGATGCAGAGATGGCTGGCTTACGTAAGAAAAAGACTCCAGTGAATTCAACTCTTATAAACAAAGGAGTTGGAAATTGGGAAAAGCATACCAAAGGAATTGGTGCCAAGCTTCTTCTGCAGATGGGTTATCAACCTGGCAAAGGTTTAGGAAAAAACTTACAGGGCATTCAAGCGCCTGTTGAAGCCACTTTAAGGAAAGGTAGAGGAGCCATAGGTGCTTATGGTCCCGAAAAGGCAGCCAAACTTGCAGAGGTAAAAAGTGATAAAAGTAAAAAAGGGAAAGAAGGCGGGTTACCAGAGGAAGAAAGAGTATCTCAATGGCGGAAAGAAGGTGATCAAGGCAAGAATGTTCGCTACGTCTACAAGAGTATCGATGAAGTTATTGAACAAAGTAGGCAGCCCGGTAAACCAAAGAGAGAATTCAATGAATTAAGTAAAGTGAAAGTTATAGACATGACGGGACCAGAGCAAAGAATTTTGTCAGGATATCATGCCATATCGGGTGTTCAAAGACCCACTGATCAATGGGAAATTCGCAAAGACAAGCAATTTGTCAATTTTTCTGTTCCAGAACTTCAGCACAATCTTAATCTTTTAGTGGATATGTGTGAGCAGAGTATAATTGAAAATGATAAAAAATTAAGGTATTCGGAAGATAGGTTTATAAATATTGAGCAAGAAGTCTCTAAACTGGACAAGAAGCTTACTCAACAAGAATCAAGTATCGGATCGTTGAGAAAAATCCTCCACACAATCGAAAGTTTTGTCGAATCTGCAGAAAAGAAATCATTAACTGTAGAAAATGCAATTGACTCTTTGAAGGAGCTGCAGGAAAATAACGCATCGGATTACTGTATGTACGAAGTACCTGCATTAACAACAGCAATTTTGCAGCCTGTCATCAAAGACAAGCTCAGAACATGGCAACCACTAGAAGAACCAGAAGAACCTGTAGAATTATTCAAAAAATGGAAAGAGTTAGTTGAGACTGATAAAGCACATTACCTATCTTCAACATCAGTGCAAGATCCGTTTGCGGTGCTCTTGTGGGAATCATGGATGCCTTCAGTTAGAACAGCCATCAATGTTTGGAACTGTCGGAACAGCGAGCCTCTCATCAAATTTTTAGAGATTTGGGCTCCTATATTGCCTCGTTGGATTTTAGAAAATATCCTTCAACAAATAGTTCTACCCAAGCTACAACGAAATGTTGAAGAATGGAACCCTCTCACAGACGAAGTCCCGATCCATCTCTGGATTCATCCGTGGGTAACTCTTCTGCATAAGCACCTCTCAACGACTGTATTCCCAATCATCCGCCACAAGTTGAGCAAGGCTTTAGAAAATTGGCATCCCTCGGACTATTCTGCCAGACCCTTGCTTGAAACGTGGGTCAATGTATTCACCGAAGGAGAAATGAACTCATTCCTTGTTAATAATATTGTTCCTAAATTACATACCGCTCTTCAAGAGTTCATCATCAACGTTCATCAACAACACTTAGACAATTGGAAATGGGTAATGGACTGGAACAATCTAATACCTACGCCTGTCATGGCAAGTATATTGGATAAATCTTTCTTCTGTAAGTGGCTTGAAGTTTTGACGTTATGGCTCAATATGAATCCAGACTACGATCAAATTAGGCAGTGGTACACAACTTGGAAGAGCCTCGTTCCTGAAAAGTTACACAATGAACCTGTTATTAAAGAGCATTTTAGATCAGCCCTTGATATGATGAAAAGATCTGTCGGGAATGGAGGACCTCCATCACCACCTCCTCCTCCGCCTTTACATTCTGCTACTCCTAGCCAGACGCGATTTACGAGTATGGCAGAGGCTGTCAGAATATCTTCCCAAGTTCCTCAAGGCTTCAAAGAACTAGTTCAGAAACGTTGTGAAGAGAAAGGCATAATTTTCATGCCTTTACCGAACAGATTCAAGGATGGGAAACCAATTTATCGCTGTGGAAATGTCATGATTTACATAGAGAAAAATGTAATATTTGCCTGTAATAATAGCAATATGTGGGTCCCAACATCATTAAATTCTTTGTTAGAAATTGCTCATGGCTAGTACGTTCTATCAGATCGTGATCTCTACTTTTCATTGTTAATCTAACAAAGAAGTGTAGCTCACTTTTTGCTCATTTTCAAAAGAGTGAAAACAGAAAATCCCTCATTTTCATTTAATTACCTTGTGATGAATTTTCTACGTCAAATTTTCTCAGCATGATTCTAATGATATGATATTTCTAAAGCCTGTACCTTTTTCCTGAATAAATGTAAAACTATTGAGGTTTAGAAGTTTTCACAATATCAACAAGAAGAGCACTTAAAAATTCATCATTAGTGTTAAATAATTTGAGCTGTCAAATTTCGGTCTCACCCATCCTTGTTAAACTAACTATGGTTTGTTGCAAATTTTGGTTGTTTTGTATAATTATTTTGTAAATTAATTTTATTCGCTTTTTAATTGACCAAT
Protein Sequence
VGTNGFVIFRIFEVITVLIVNIFIL*YFVRTLEISTANFVEKSICHSCLWFALLCVSFVTFLCLKTCE*VQFFCSGSFRHPSNMSDNEVERFEVTDYDLDNEFNPNRPQRRLTKNQRIYGIWADDEDGSDDGAPMVGFKGTGKRSKNYTAPVSFIAGGVQQAGKDKAIKEDDLKKSGPSTQMRESPRRRHSSSSEGESASFKTSNFTDAEMAGLRKKKTPVNSTLINKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKNLQGIQAPVEATLRKGRGAIGAYGPEKAAKLAEVKSDKSKKGKEGGLPEEERVSQWRKEGDQGKNVRYVYKSIDEVIEQSRQPGKPKREFNELSKVKVIDMTGPEQRILSGYHAISGVQRPTDQWEIRKDKQFVNFSVPELQHNLNLLVDMCEQSIIENDKKLRYSEDRFINIEQEVSKLDKKLTQQESSIGSLRKILHTIESFVESAEKKSLTVENAIDSLKELQENNASDYCMYEVPALTTAILQPVIKDKLRTWQPLEEPEEPVELFKKWKELVETDKAHYLSSTSVQDPFAVLLWESWMPSVRTAINVWNCRNSEPLIKFLEIWAPILPRWILENILQQIVLPKLQRNVEEWNPLTDEVPIHLWIHPWVTLLHKHLSTTVFPIIRHKLSKALENWHPSDYSARPLLETWVNVFTEGEMNSFLVNNIVPKLHTALQEFIINVHQQHLDNWKWVMDWNNLIPTPVMASILDKSFFCKWLEVLTLWLNMNPDYDQIRQWYTTWKSLVPEKLHNEPVIKEHFRSALDMMKRSVGNGGPPSPPPPPPLHSATPSQTRFTSMAEAVRISSQVPQGFKELVQKRCEEKGIIFMPLPNRFKDGKPIYRCGNVMIYIEKNVIFACNNSNMWVPTSLNSLLEIAHG*YVLSDRDLYFSLLI*QRSVAHFLLIFKRVKTENPSFSFNYLVMNFLRQIFSA*F**YDISKACTFFLNKCKTIEV*KFSQYQQEEHLKIHH*C*II*AVKFRSHPSLLN*LWFVANFGCFV*LFCKLILFAF*LTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-