Tvap000206.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:11947630-11949513[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 1.3e+03 -0.8 0.0 17 24 33 40 28 41 0.85 2 2 4e-11 2.6e-08 33.4 0.1 2 41 95 134 94 137 0.89
Sequence Information
- Coding Sequence
- ATGAAACCAGAGCAGACTGCACCTGCAACATTAGTCAAATCGTTTCAATATTCCAAATACCGCCAGCTGTACATTCAGCAACAAGAGTTGAAAAATGTTAGTCTGTGCCGTGCAGCAAAGCAAGGGAAATTGTATGGCGGATTTTCCGTAAACCAATCGAGAGGGGGTGGTCCCTCTGTTGTTTGGTGGGTCCGCATCATGGTGAGAATAGAAACAGTTCGAAGAAAATTGTCAAGAAAGTCTAAGCCTCATCTCCGTCTGAGACCATACATGTCATACAATGATGAATCAATGGAACAGGCAGTGGCTGCAGTCAATGCGGGATCCACTATACGAAGGGCCGCAGAACAATACGGGGTTTCCAAGTCAACTCTGCAGCGAAAAGTTAACAAGAAACAGATGAAAAGCCCAGGACGTCCTTGTGTTCTAAGTGCAGCCGAAGAAACTAAAATTTGTGATTACATTGCTGATAGTGCTGAATGGGGTTTCCCTTTGTCAGGTACAGATGTGTGTTTTGTTATCAAAGACTATTACGATAGAAGAGGTATAAGAGCTCCTCAGTTTGTGAACAATCTCCCGGGGAAAGACTGGGTTGTTGGTTTTCTCAATCGACACAGTAAAGTTTTGTCGCAGCGACTTAGTGATAACATCAAGCGGAAAGTAATTTATCGGGAGGTGCTTCCACTAGGGGCCCCTGTTGCCCCGATTAGAAGACATCCGTCACCGACATTCACTCCATCTCAACTCAATCCAAGCCAACCAAACTTGCTTGCCGAAAATGACAAGTTGACACTCCGACCCGCGAATGGATACATGTTCCAGATTCAGGGACAGCTTGCTATTACGGAAAAAATCTTGTGCTACTTTGTGGTTTGGACGCCAATTGATACTCACATTGAAATGATCAAATTTGATTCTAAAATGTGGGACACGATGGTGGTTCAACTAGAAAAGTTCTATTTAAACGAAATGCTCACTGAATTAGTCGACTCGAGGCACAAACGGAGGATGCCGATCTGA
- Protein Sequence
- MKPEQTAPATLVKSFQYSKYRQLYIQQQELKNVSLCRAAKQGKLYGGFSVNQSRGGGPSVVWWVRIMVRIETVRRKLSRKSKPHLRLRPYMSYNDESMEQAVAAVNAGSTIRRAAEQYGVSKSTLQRKVNKKQMKSPGRPCVLSAAEETKICDYIADSAEWGFPLSGTDVCFVIKDYYDRRGIRAPQFVNNLPGKDWVVGFLNRHSKVLSQRLSDNIKRKVIYREVLPLGAPVAPIRRHPSPTFTPSQLNPSQPNLLAENDKLTLRPANGYMFQIQGQLAITEKILCYFVVWTPIDTHIEMIKFDSKMWDTMVVQLEKFYLNEMLTELVDSRHKRRMPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478126;
- 90% Identity
- iTF_01478126;
- 80% Identity
- -