Tzet000657.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trachymyrmex zeteki
Gene Symbol
-
Assembly
GCA_001594055.1
Location
NW:2843519-2855862[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 5.2e-06 0.00034 20.2 1.0 1 23 253 275 253 275 0.98
2 32 0.0074 0.49 10.3 3.7 1 23 298 321 298 321 0.96
3 32 0.0005 0.033 13.9 0.5 2 23 328 350 327 350 0.96
4 32 0.00054 0.036 13.8 0.1 1 21 370 390 370 391 0.95
5 32 0.01 0.68 9.8 0.1 2 23 490 511 489 511 0.95
6 32 0.0051 0.34 10.8 0.2 1 23 517 540 517 540 0.91
7 32 0.00015 0.01 15.6 0.2 1 23 611 634 611 634 0.96
8 32 0.056 3.7 7.5 3.1 1 23 640 663 640 663 0.95
9 32 0.099 6.5 6.7 1.5 1 23 676 698 676 698 0.97
10 32 2.8e-05 0.0019 17.9 0.9 3 23 743 764 742 764 0.96
11 32 2.4 1.6e+02 2.4 0.4 1 23 796 819 796 819 0.92
12 32 0.0043 0.28 11.0 1.0 2 23 826 849 825 849 0.94
13 32 0.74 49 4.0 0.0 2 23 858 880 858 880 0.90
14 32 0.021 1.4 8.8 0.0 2 23 887 909 886 909 0.93
15 32 7.4e-05 0.0048 16.6 3.2 1 23 917 939 917 939 0.97
16 32 0.028 1.9 8.4 1.3 3 23 977 999 975 999 0.93
17 32 0.00017 0.011 15.4 3.3 1 23 1002 1025 1002 1025 0.97
18 32 0.00057 0.037 13.8 0.1 2 23 1032 1054 1031 1054 0.96
19 32 0.00075 0.049 13.4 3.9 1 21 1081 1101 1081 1102 0.95
20 32 0.0022 0.15 11.9 1.8 2 23 1116 1137 1115 1138 0.93
21 32 0.31 20 5.2 1.1 1 23 1141 1164 1141 1164 0.94
22 32 0.022 1.4 8.8 2.1 2 23 1171 1194 1170 1194 0.90
23 32 2 1.3e+02 2.6 0.1 2 23 1202 1224 1201 1224 0.94
24 32 2.7 1.8e+02 2.2 0.0 2 23 1231 1253 1230 1253 0.88
25 32 0.19 12 5.9 2.7 2 23 1262 1284 1262 1284 0.96
26 32 0.3 20 5.2 0.6 2 23 1290 1312 1289 1312 0.92
27 32 0.014 0.9 9.4 0.1 1 23 1374 1397 1374 1397 0.95
28 32 0.00014 0.0092 15.7 1.1 1 21 1425 1445 1425 1446 0.95
29 32 0.26 17 5.4 1.9 2 23 1547 1569 1546 1569 0.94
30 32 0.75 50 3.9 0.4 2 23 1576 1598 1575 1598 0.94
31 32 0.57 38 4.3 2.5 1 23 1609 1631 1609 1631 0.97
32 32 0.017 1.1 9.1 0.2 1 19 1635 1653 1635 1656 0.94

Sequence Information

Coding Sequence
ATGGCGACGATATCGACGATCACGACGACAACGTCGATGTCGACGTCAACGACGAGGATCGAGACAGCGATGGCGTCGGAGCCGAGAAGGAACTATAACGAACTGTGTCGCTTGTGCGCTTCCTACGACGCTGTTAGGATGCACATATTTGGCCAGGAAGGCAAGAATCGTCAGCTCGTTGATAAGATTGAAACGTGCTTGCCGTTCAAGATAATGGAAGATGATTATTTGCCAAAAGTCCTGTGTTATCGATGTATGTACAACTTGGAAAATTTCTATGACTTTAGGACTGCGTGTGTTAACGCAGCTGTTTTGTTGGAAAGAAATAGGCCGAAGGAAGGTGTGAACGATGACGGTGCAAATGACACTGCGCAATCCTACAAGATGCACACggtatttcttaaaaaagaaaatatgccAGTACTTATCCCGGAAGCACCCGTAGTCAATCCCAATGCAGCATTGGGTACACCACCGAGATTAAATTCGGATGGTGAAGCAGATCCCGAGATCGAAGAGATTCTTGACACAAGTGAAGGTACGGATGAAGccACAGTGATCGACGATTCGGAAGATCGGCGATCGGAATATGAGATGGCATACGAAATGGACATGGAGACGAATCCTAGCGATTTCTTGGAAATGACCCCGATGGTAACCGAAGAAAATGAAGAGGAATGCAATACAAACAACACGAATACCACGACTGCTCAAGATACCACGGTCTTTCCACATACGTCACAACAACATGAGGTCTACGTCTGTTCTCTATGCAACAAAGCGTTCAGTTCCAAGGGTCACTTGTCTCTGCATGCGAGGATTCACGTGGGTGAGGGTGATGTGATTGGCGAAAGAGTAATTACCGACGACCATACTTCATACCAACGACCGTATCAATGTGATCTTTGTCATAAATCGTATTCTACTGCGAAGCATCGCTGGGGGCATGTTTCTACAACGCATCGGGGACATCCTGCAGTAACGTGTGCGTACTGTTCTCGTATATACTCAACGCGATATAATCTCGATGAACATATAAAATCACGACATGCTGGGCTACCACCACCCCCAGAATTATCGGTTCCCCTTACGCGTACGGAAACACGTTACCAGTGCCAAACATGTCCGATGGTGTTTACGGATCTAACAGATTTCAATGCGCATCGTCAGATATGCATCCAGGAACAACGTACAGATTTGTCAGGGCAAACCGAAgcacagaataataaaattttcgccGATACATCCGACGTCTCGAGTATAGATTTGGATATAGATGAGAATAAAGACTTCAAGAATGCTGAGGCTAAATTGGCGAAAAATCCACAGTTAACCATATTGAAACAAGCGCTGACTAAAGGAGACAATTTAAAACGGAATTTCGATGATGATAGTTCGACGTCTAGCGGCAAGccgaaaaaaatagttaagtcagAAGAAGGCGAGGCAAATCCTCAGAAAAGATGGTATTGTGAAGCTTGCCCGCAAAGTTTTACATCAGTGGAGAGTTTAAAAGAACACGAGATTAGACACGATGCCGAAAAGCCATATATTTGCATACTATGCAACAAAGATTTTGTTTTGAAATCTTCATTAATTAGACACATTACAGTGTTACATGGTGTTGATCCTACTCCTATCATCGACAGTGATAAGTGTCTAAAGGCAACAGTAATGTCTCAAAATTGGAACGATCAAGTGGACGTCAGCGTTTATGAACaaagtgaaataaaagatCCACTAGAGATCTCGTCGTCACCTGagataaatttagagAATGATGACAAGGATTATAAAAACAACCATGAGAATGTAGAAATCGAAACGGTATTTGTATGTGAGACTTGTAAGCGAGATTTTAATGATCGAGCGTCATTATGGCTGCATATACGAGCAATGCACAAGGAATATGCAGCATTTACCTGTGGAGTGTGTTTAAAGATGTGCTTTAATAATACACAACTTCAAAATCATGTCTTTATGTATCACGGAAGATCTAAGCTTTTAATCTCGGAACAAAGAAGGTATAGTTGCACGATATGCGGTAGACAGCATGACTCGAGAAAAAAGCTAATCACTCATGTCTCGATACATAATGTCGATCCTGCCTATGATCCTGCAAGTTTTGTACAATTGaacagtaattattataatgaaaactTGAATGGTAACGAAGGCAATGAACAAGTATTAGATTTTGACGGAGAAGATGGCGAGAAGGTTGATTGTTACATTTGTTACAAATCTTTTCCAACTGAGGATCATCTTATACGACATCAGAGAAATGCTCACAAGTCTGATCAGATTTCGTTAGGAGATGCTGCAGGCAGTGGAAATACTTTAAGTGTCAATGGCAATGGTAATAGAGCGCAGTatcatttgttttttgtttgcGAGGTATGTGGTAGTTCACATTCGAGCAAATGGGAACGTTGGTTGCATATCAACAACACACATAATAATGAATCTTCTATTAAATGTGAATTGGAAAATTgtggaaaaatatttgcgaCGAAATCGTTACGTAATGAACATCTTCAGCATCATGCGATACAAGGACCTTCGCCAAACACCTGCGAGATATGTGGAAAATTGTGGCCTACTCGCGTTGATTATTGGAAACACGTGATGGGCGTACATGCGGACACAGTGCCTCTAATATGTGGCGTTTGTTTGAAAGTATTCTCCGATGTTATGCAATTGAGCGCACACGTTAAAGCGAAACATTGGCCACTAACCAGTGGTGATTTCTGTTGTGATATTTGCGGTAGACCATATTCCAATAAATCGAAAATGTCTCGGCATAGAAAGATCCATGGCTTGGAGGCGGCTATGGACGCTGCATGCGATAATAGCAGTTTCAATGAAACGACCAATGAATCGGTGAAACCTGATCACAGTAATGGCGCTTCAGAAATAGAGTTAAATTGCGAGCAGTGCCCTGAACTCAGTTTCACGACGTTAGACAGTTTGTGTAATCATCGACGGATAACGCACAACCTTTTCCCATGCGATTTGTGTAACAAATGTTATGGCAGAACGTCACACTTATGGAAACATGTAAATAGGGTGCACAAAGGACACACAGACGTGACCTGTCCTTACTGCGCAAAGACAAGCGCGTCAAGGGATCATCTGGCAGCACATATTGCAAAGATTCATAGGTTCATGCCCACAGTGGGTAAGGACAATCAAAACTGCGTCACTTCCAAATCCTTGAGTGCAGACGACGGTGTCTTgcattattgcgaaaaatgtaataaggGATTCCATAAACGCTACTTGCTCCGACGTCACATGAAAGGTTGTCAAAACTATCGTAAAGATCCTGGGGCATTGTTGACTCGTTGCCGGGCCTGCGAGAGGATATTCAAAGATCGCGCGAGTCTGCAGAAACATATTGAGAATCATCATACCACATATACTTGCCATTTATGTAATGAGACGATCACTTCCAAGTTGGGCATCATGACACACAATCGTATCAATCATATGGATCATCCGGATCTGACGTGCGACCATCCGAGCTGTAAGAAACTTTTCCGCACCAAAGAAGATTTGGAATCTCATCGAAAAGATCACAAATATCATAGCAACTTGGACGTTTGTGATTTTTGCGGTGACACCGTGGAAAATAAACTGAAACTGAAGATGCATGTATTATCGTTGCATCGAAACGAGATCGGCGTATCCTGTGGGGTCTGTCTCATTCCAATGAAGGATCCCAAAGATTTGAAGAAGCACGTTGAAGCGGTGCATAGCAGCGTTCTCTCCAAACCAAACACGTGTCAGGTATGTGGTAAACAATATGCATCCAAATGGAAGGCTTTCGATCACACGAAGAAGTGTCATGGCAAAGTTTTCCTGACGTGCAAACAGTGTCTAGCCGTTTTTACGGACGAGAATGATATACGCAATCACTACGAACATGTGCATAACGTTCCAAAGGACCAATTAGCTATTTTCGAATATAGAATGGATATTGGTGCAAAGAGGGAGGGTTACGAGACTCCTGATATCATTGTGAAGGAGGAACCGGATGATTTGGAGTTTGACGAAGAAATGTGCGACGAAAGTTCGAACGACTCTCGCAAACGTAGAAGATCGCCAAACGATACGTATGATTGCGAGATGTGTCCCGAGATCTTCCTCAATTCAGACACTCTCGCCAAGCATTATCAGAACGTCCATAATACAGACCCCGTCCGTATGTTCAAGAAATTCAGAAAGGATAATAGCGATGGCAAGCGCAAGATGAGAAATAGAAACAACTTTGAATGCAAGAATTGCAAAAAGCAATTCTCTACCAAGACTCTGTTCTGGAATCACATCAATGTATGTACACGACGAAACTCGATAGGTAGATTTGACATGCCGAATAATGTTCCGACATCAATTCTGGAGTctcatctgaaaaataataatcagatTCAACGAGAAGAACCGGCATCGCTTACGAACGAATCCAACTTGAACATTCCCGACTTCAATCTATTTGAAGACATCAATTTGCAATTGTCAGCCCAAAAACCTGTGCCGAATCTTATGCCATTGTCGCAGATGAAGACGACGGGTAACGGCAAATGCTCAAGAAAAGACTCACGCAAGGTGTATGATGAATCGACCAATACCGAGTGTACGTGCGAAGTTTGTGGTAAACAATGGCCCGCCAAGAAGCATTTGTGGCAACATCTAATTCGTTTCCATCGCGCTGAAGCTGCTGTTACGTGTGGCGTATGTTTGAAGCTGTGTAAATCTTACCAAGACTTGGCCGACCACCTGAAAGCTGAGCATGCCCCCGTTTTGTCGCCGGAGGGCAATAATTTCACATGTAAAACATGCGGTAGATATCATAACGCGAGAAGTAAATTGCTGTTGCACATGAGTATCCATATTGGAAACTTCCGATGTCAAAAATGCCAACAAGGTTTTGCAAGCGAGGAGAAACTCACCGAGCATGCAACGAGCTGCAATGTCAAATCGGAGTTTGAGGATAATACAGTGGCAGATGAAGATAATGCAAAGAATGACAACGACGAGAAGGGCAGTTTAATCGCTGACGAGACATCAGTCATTGAGGAAGCAGAGGAAGCGGAGGAAGCAGACTTCGAATCAGAAGGTGAAGGAAGTAGGGATATTCACGATGAAGATAATTCGGAAAATAGTGAAGAAGACAATTCGGAAAATAGTGATGATTCAGACAGCGATAGTAATAGTAGTTCGAGTGAAGACGAAAACGAAAACGAAGAaggagaggaagaggaggaagagaatGAAAACGAAAATGAATCTGATACGAGAACTACCAGTAGAGCGAGTGGTGATAGTGTATCATGTAATTCCGATAGTGATGATGAATCAGATGTGGATGAAACGGAAGTGGACGCAACGCAAAAGGAAACTGTACAATTGAACGATATTAATAGATTCAGGATACGTGGTGACGGTATTCAAGAGAATATGCCAATGGAGATAAATATTGAGGATCAGAAACCCGATCTTACATCCATAGCAACGGTTGCAGAACAGACTACATCaagtaatttaaatgattttttgattTCTAATGCACCTGGAAACATGGGCACCGATAAATTTGAGGCATTTCATGTCGAAAAGCTGCAACAAATTAAAGCTGAGACGAGCGATGTAGACTCTGATAACGAAGACGATGACGATGAGCAAGATGATgaggaaaataatgaaaatgaagaagaggaagaagatgGTGAAGAAGGTGATCAGGATGAAGGTGAAGATGAGGCTGAAGATGAGGCTGAAGATGAGGCTGAGAGTGAAGCTGAAAGTGAGAATGAGAATGAGGATGAGGATGAGGGTGAAGCTGCAGccgaggaagaggaagaagaagaggatgAAGATGACGACGATGGACCGCCTGTGTTAAGTCCAATAATGCCTTTGTTACCAGAAAACGAATCTGAGGAACACAGCGGTACGACAGATCGTACGAGGCACAAGCTTAGTCCAATGGTTTCGCTGAGTATAGCTAAAGATCTAGAGGAGTGCGAAATACCAAATGACACGGACAATGTGTCAAATGCAGTCAACTTCTTCGCGGCTAATAACAATGATTTGCCCGTAACATGGGACGAGAATTTGGATGATAACGTAATCGATAATGGTGATTGCAACTCCGACGCTGGAAACAGGGATATGGAGAAAAGTAAGGAACTTGATAAGGAGTACGTAAAAATAGaagtaaaaatagaaagtGACTTCGAGGAAGATTCCGTGGATGAGAACGTAGTGGACAACAGAGAAGATGATGGAGATAACCAAGTGCATGAGGTGCATAATCTGGACGGAACTGTGTTAATGGTGACTAATGACGCGGAAggtaatcaaattttgatagaaCAAAACGTGTTAGATATCGATAACGAGGACTCTAATATCGAAGCGGCACAGTATATTTATCCAGAGAACACTTATGAGATCGAGGAAGAGGATTATGCAACGCGAAACGAAACCGACGTCATGCAGACGGATGAGATGCAAGGTAGTATGTCCTACGTTCAGGATACATCGGAAAACGAAGATAGTATGCAGGATGATATCGAGGAGAACAACAGTGATGTGCAAAAACAGTAG
Protein Sequence
MATISTITTTTSMSTSTTRIETAMASEPRRNYNELCRLCASYDAVRMHIFGQEGKNRQLVDKIETCLPFKIMEDDYLPKVLCYRCMYNLENFYDFRTACVNAAVLLERNRPKEGVNDDGANDTAQSYKMHTVFLKKENMPVLIPEAPVVNPNAALGTPPRLNSDGEADPEIEEILDTSEGTDEATVIDDSEDRRSEYEMAYEMDMETNPSDFLEMTPMVTEENEEECNTNNTNTTTAQDTTVFPHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHAGLPPPPELSVPLTRTETRYQCQTCPMVFTDLTDFNAHRQICIQEQRTDLSGQTEAQNNKIFADTSDVSSIDLDIDENKDFKNAEAKLAKNPQLTILKQALTKGDNLKRNFDDDSSTSSGKPKKIVKSEEGEANPQKRWYCEACPQSFTSVESLKEHEIRHDAEKPYICILCNKDFVLKSSLIRHITVLHGVDPTPIIDSDKCLKATVMSQNWNDQVDVSVYEQSEIKDPLEISSSPEINLENDDKDYKNNHENVEIETVFVCETCKRDFNDRASLWLHIRAMHKEYAAFTCGVCLKMCFNNTQLQNHVFMYHGRSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAYDPASFVQLNSNYYNENLNGNEGNEQVLDFDGEDGEKVDCYICYKSFPTEDHLIRHQRNAHKSDQISLGDAAGSGNTLSVNGNGNRAQYHLFFVCEVCGSSHSSKWERWLHINNTHNNESSIKCELENCGKIFATKSLRNEHLQHHAIQGPSPNTCEICGKLWPTRVDYWKHVMGVHADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIHGLEAAMDAACDNSSFNETTNESVKPDHSNGASEIELNCEQCPELSFTTLDSLCNHRRITHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHTDVTCPYCAKTSASRDHLAAHIAKIHRFMPTVGKDNQNCVTSKSLSADDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHTTYTCHLCNETITSKLGIMTHNRINHMDHPDLTCDHPSCKKLFRTKEDLESHRKDHKYHSNLDVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEAVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIRNHYEHVHNVPKDQLAIFEYRMDIGAKREGYETPDIIVKEEPDDLEFDEEMCDESSNDSRKRRRSPNDTYDCEMCPEIFLNSDTLAKHYQNVHNTDPVRMFKKFRKDNSDGKRKMRNRNNFECKNCKKQFSTKTLFWNHINVCTRRNSIGRFDMPNNVPTSILESHLKNNNQIQREEPASLTNESNLNIPDFNLFEDINLQLSAQKPVPNLMPLSQMKTTGNGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLADHLKAEHAPVLSPEGNNFTCKTCGRYHNARSKLLLHMSIHIGNFRCQKCQQGFASEEKLTEHATSCNVKSEFEDNTVADEDNAKNDNDEKGSLIADETSVIEEAEEAEEADFESEGEGSRDIHDEDNSENSEEDNSENSDDSDSDSNSSSSEDENENEEGEEEEEENENENESDTRTTSRASGDSVSCNSDSDDESDVDETEVDATQKETVQLNDINRFRIRGDGIQENMPMEINIEDQKPDLTSIATVAEQTTSSNLNDFLISNAPGNMGTDKFEAFHVEKLQQIKAETSDVDSDNEDDDDEQDDEENNENEEEEEDGEEGDQDEGEDEAEDEAEDEAESEAESENENEDEDEGEAAAEEEEEEEDEDDDDGPPVLSPIMPLLPENESEEHSGTTDRTRHKLSPMVSLSIAKDLEECEIPNDTDNVSNAVNFFAANNNDLPVTWDENLDDNVIDNGDCNSDAGNRDMEKSKELDKEYVKIEVKIESDFEEDSVDENVVDNREDDGDNQVHEVHNLDGTVLMVTNDAEGNQILIEQNVLDIDNEDSNIEAAQYIYPENTYEIEEEDYATRNETDVMQTDEMQGSMSYVQDTSENEDSMQDDIEENNSDVQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01355612;
90% Identity
iTF_00015543;
80% Identity
-