Tsep003206.1
Basic Information
- Insect
- Trachymyrmex septentrionalis
- Gene Symbol
- FTZ-F1
- Assembly
- GCA_001594115.1
- Location
- NW:4792057-4823600[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.098 3.4e+02 -0.4 6.4 46 123 38 86 5 122 0.45 2 3 1.3e-18 4.5e-15 55.2 0.1 1 57 326 375 326 437 0.66 3 3 5.5e-73 1.9e-69 234.3 1.3 166 408 524 759 486 760 0.91
Sequence Information
- Coding Sequence
- ATGGGTGATATGTTATTGGAGATGGAGCAGCATTCGGGCCTGATATCCCTGAGCATGTCGCCGTTCCACCTGAGTCCGCAGGGCAGCCCGCAAGCCACCGCAGGGCAGCAGCCCCCGCAACAACAGTCGCAGCCGCATTACGGCTCGTCGGCTTATAGCAGTTGCGCGCAGAGCTCGCCATCGCCCATGTGCCATCAGCCGCAATCCCAAtcgcagcagcagcagcagcagcagcagcagcaacaaaaGTCGGTTCACAATCAGGCGGGACAGTCGCAGGGTATGTCCAGTTTCGAGGCCGCCTTCTTCGATTCCGCCCCTCTCGAGGATCTTCGGTGTCCCATGTGCGGCCACAAGAATATATCCAGCTATCAGCTCGGTCTGCAAGGTCTCCTCACGTGTGAGAACTGTAAGAATTTCTTCAAGCGCAACGGTTCACCGTGCAGCAACAAAAAGGTCTACACGTGTCTTTTTCCTCAAACGGGGAGTaacggcggtggcggcggcggcggcggcggtggcaacggcggcggtggcaACGGCGGCGGTACTGCCGGAGGTGGTGGTCCAGGCGCGGCTAACGCCACGGTCAGCGGCGGAGGACCGGCCACCGCCACGGGAAGTGGCAACGTCGCCGCCGGTGCGGTCCCGACCGGCGGCGGTACCATGTGCCACCCTGGACTGGTCGGCCAGGTCGGCATCGTCACCGGCTCGATACCCTGCCCGTCCGATTTCCCGGATACCAAGGATATCATCATCGAGGAGCTGTGCCCCGTCTGCGGCGACAAGGTGTCCGGTTATCACTACGGTTTACTCACCTGTGAGTCCTGTAAAGGATTCTTCAAGCGCACCGTCCAGAATAAGAAGGTCTACACGTGCGTCGCTGAGAGGTCCTGTCATATCGACAAGACGCAGCGGAAACGGTGTCCCTACTGCCGCTTTCAGAAGTGCCTCGAGGTCGGCATGAAGCTCGAAGCTGTGCGGGCGGACAGAATGCGAGGCGGTAGAAACAAATTCGGGCCCATGTACAAGAGGGATAGAGCGCGGAAGCTGCAGCTTATACGTCAACGGCAACTGGCGATCCAGACGATACGCGGCAGCCTCGGTGACCCGAACAGCTACTCGACCGCGGTCGCGCCCTTGATGCACATCAAGCAGGAGATTCAAATACCTCAAGTCTCGAGTCTGACCTCGTCACCGGACTCGAGCCCGTCCCCCGCGACCGTGGCCGCGGGCCTGGTCACGACGCAAGCCGGCGGCAGTGGCAGCGGGGCTGGCCAGCACCAGCTGATCGCGCCGTCCAGCCAACCCAACATCGGTACCAGTGGTGctggtggcggcggcggcggcggcggcggcggcggcggcggtggtggtggtggtggtggtggtggaggCGGAGGCGGGGGTGGCGGCAATCACTTGCACAATCTTAACCCTGGTCTGGACAGCAGACTCTGGGCCGCCAACTCAACTACCCCTGGCACGAAGGTCTTCAACTTCGGCGAGCAATCCGTGCAGCCACACGGCGGCGGGATGCCGAGCTACGCGTCCAATCCCGTTGTCGCTCTTAAGACACTTAGTCCGATGATAAGGGAGTTCCTGTCGTCGATCGACGACCGCGAGTGGCAAACGTCTCTCTTCGGACTCTTGCAAAGCCAAACGTATAATCAGTGTGAAGTGGACTTGTTTGAATTAATGTGCAAAGTGCTCgatcaaaatttgttttcgcAGGTAGACTGGGCTAGAAATTCGACGTTCTTCAAAGATCTCAAGGTTGACGATCAAATGAAGTTGCTACAACATTCTTGGTCGGATATGTTGGTGTTAGATCACCTTCATCACAGGTTACACAATAATCTACCCGACGAGACGACACTTCACAATGGCCAAAAGTTTGATCTTCTCTGTCTCGGCCTACTCGGAGTTCCTTCCTTGGCCGAAACCTTCAGGGAACTATCCAAGACACTTCAAGAACTAAAATTCGACGTTCCCGAATATATATGCATGAAATTCCTAATGCTGCTGAATCACGATGTCCGTGGACTAGTGAATAAGAAACATGTGCAAGAAGGTCACGAGCAGGTTCAACAGGCGCTTATGGAATACACGCTAAGCCATCACCCATCTGTACTGgataaatttaataagctgTTAGCAGTATTACCGGACATTCACGAAGTAGCAACCAAGGGAGAAGAGCATCTTTATCAGAAACATTGTAATGGAGGCGCACCAACGCAAACGCTTCTCATGGAGATGCTTCACGCCAAGAGGAAATGA
- Protein Sequence
- MGDMLLEMEQHSGLISLSMSPFHLSPQGSPQATAGQQPPQQQSQPHYGSSAYSSCAQSSPSPMCHQPQSQSQQQQQQQQQQQKSVHNQAGQSQGMSSFEAAFFDSAPLEDLRCPMCGHKNISSYQLGLQGLLTCENCKNFFKRNGSPCSNKKVYTCLFPQTGSNGGGGGGGGGGNGGGGNGGGTAGGGGPGAANATVSGGGPATATGSGNVAAGAVPTGGGTMCHPGLVGQVGIVTGSIPCPSDFPDTKDIIIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQLIRQRQLAIQTIRGSLGDPNSYSTAVAPLMHIKQEIQIPQVSSLTSSPDSSPSPATVAAGLVTTQAGGSGSGAGQHQLIAPSSQPNIGTSGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGNHLHNLNPGLDSRLWAANSTTPGTKVFNFGEQSVQPHGGGMPSYASNPVVALKTLSPMIREFLSSIDDREWQTSLFGLLQSQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSTFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRLHNNLPDETTLHNGQKFDLLCLGLLGVPSLAETFRELSKTLQELKFDVPEYICMKFLMLLNHDVRGLVNKKHVQEGHEQVQQALMEYTLSHHPSVLDKFNKLLAVLPDIHEVATKGEEHLYQKHCNGGAPTQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520347;
- 90% Identity
- iTF_00016742;
- 80% Identity
- iTF_01476949;