Basic Information

Insect: Trachymyrmex cornetzi
Gene Symbol: ZFX
Assembly: GCA_001594075.1
Location: NW:48275-83691[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.064 4.5 7.4 2.6 2 21 512 531 511 535 0.89

2 11 0.00041 0.028 14.3 0.2 2 23 550 572 549 572 0.97

3 11 0.071 4.9 7.2 1.0 1 23 591 615 591 615 0.92

4 11 0.023 1.6 8.8 0.3 1 21 661 681 661 682 0.95

5 11 9.1e-06 0.00063 19.5 0.7 1 23 745 766 745 766 0.98

6 11 1.7e-05 0.0012 18.6 0.6 1 21 772 792 772 793 0.95

7 11 8e-05 0.0055 16.5 4.9 1 23 810 832 810 832 0.98

8 11 0.0036 0.25 11.3 0.1 1 23 837 862 837 862 0.96

9 11 4.7e-05 0.0032 17.3 0.9 1 23 869 891 869 891 0.98

10 11 0.14 9.8 6.3 3.3 1 23 903 927 903 927 0.95

11 11 0.00036 0.025 14.5 1.2 1 21 933 953 933 958 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.064	4.5	7.4	2.6	2	21	512	531	511	535	0.89
2	11	0.00041	0.028	14.3	0.2	2	23	550	572	549	572	0.97
3	11	0.071	4.9	7.2	1.0	1	23	591	615	591	615	0.92
4	11	0.023	1.6	8.8	0.3	1	21	661	681	661	682	0.95
5	11	9.1e-06	0.00063	19.5	0.7	1	23	745	766	745	766	0.98
6	11	1.7e-05	0.0012	18.6	0.6	1	21	772	792	772	793	0.95
7	11	8e-05	0.0055	16.5	4.9	1	23	810	832	810	832	0.98
8	11	0.0036	0.25	11.3	0.1	1	23	837	862	837	862	0.96
9	11	4.7e-05	0.0032	17.3	0.9	1	23	869	891	869	891	0.98
10	11	0.14	9.8	6.3	3.3	1	23	903	927	903	927	0.95
11	11	0.00036	0.025	14.5	1.2	1	21	933	953	933	958	0.94

Sequence Information

Coding Sequence: ATGGAAGGCTTCGAAGAAGACGATGACACTCATTTCTGCATCAAGTGTAATTTGACAATTCATGGGCTCGACAATTATGTGCAGCATCGTCGATCAGGCTGCCGATCATCGGATGCTAAAATCGAGATTGTTCACGAATCACCATCGACACCGACGGTATCCTATCCCGAATTTCTAAATGCAGACGCATTCTTCAGCTCATTAGAATTACAGAGTAACACTCGACGAGCGCCGACTTTACTAGATAACAGAAAATTCAAGAAAGatgacaaaagaaaaaaagagcaaAAAGGTCAGGTGGATGGTGATGAGGCCGGCACGAAGGATAAACTTCACAGCATGTTACCCGCGGTCAGCGATCTGGACGAACCACCCGATATGTGCATCCAGTCCCTCAAGCAGACAACCCTCGACCGAAAGAGGCACGAAAATCAGCAGAGTTGGTTAGATGACACCATTCTCGCTGACCTTTCTTTAGGGAATAGCGCGACCAAGAAGCTGGCGAGATACGACTTCGAGTACGATGACTCCGAAGACGATATTCTAGAGGAGGAATTGGGGGAAGATTCCTATTCGGATTCAGATGACGGCGAAAATCCACAGGAAGGTCCACCGCGAGATCACACTGGTGGAAAGTGGAAGCCCGGACTGGACGATTTGCCGCAGGACACGCCGCATATGCATGAGGAGGATGCAGAGCCCGACAATGATCATCAGGAACATCCCCCGCCAACGTATACTGGCGGCAAATGGCGACCCGCAGAGACATCACaaAAGGTCGAGGAATACGAAAGCAAGGATACATCCGGACAGCCGCCGCCGGGATACACGCGAGGGAAATGGGTACCGGGTGCACGAACGGATATCGAGTCGGGATATTGGTGCAATCCTTGCGGCAGGAAGCTCGCATCGCGATTGGTCTACAACAGGCATCTGCTCTCTGATTTGCACGCGAGGAGGAGCATTAGGGAACTTGACGGTGAAGCTCTCCATCTACGGCGCGGAATAAATTCGCACGCAAGGGTGTCCAGAAGAGTGTCCACTCGTAAGAAGACCTCGAGGACGAAAGAAGAGCCCGAGCAAAAGAAAGTTAAGAAAGGTCTGCGTCAAAGGGAGAAGGAGATACTTCTCTGCGAGATGTGCCGCACGCGTGTGAGGAGGCCTCAAATGGGTAAACATTTGCTCTCCCATTACCATTGCCGTGTGTCAGGTGTTCTCGTGAATCCACGCAATCCAAGCGTACGCCGTTTCCTTCTGGAGCACATTGCGAACGTGGTTCGACAAAGCCCCTTCCAATGTGCTCCTTGTCGTTTTTACTGCAACACCGAGGAGACGTTCCTGCTTCATTGGCGCTCCGATCTTCACTCTAAGACCGTAGAACAGaTCGGCGGCAGTTGCCGATGCACTCCGTGTAACTTCTGGTGTGCAGACAACGCGACAATGGAGTCTCACCTCCTAAGTACGAGTCATCGTGACGTAGTATCGATGATGAAGGGCTCCGTGCCGGTGGTAATTAGTCGTCAACGTATGTTATCCTGCTGCAGTTGTGATCGACAATTTCGATACAACTTCCAGCTGCGGTTACACGCCAAAGAGACTGGTCACACCGCGAGCGATACCGCGTCGGACGTGTATCAACAGCGTATCAAGTGCGATATATGCTCCCAAGTCCTCCGGTCCTTGGTCGCGCTTCAGCGTCATCAGCTGACCAGTCACATCGCCAAGGACAAAGAGAAAGGCGAGGACACGGCGGATGCGCGACCAGCGCCGTACTTCTGTTCCTTCTGTTCGATGAACTTCACTACTGCCCAAGAAGCAGTTCTGCATCGTAGAACCTCTAGTCACAAGGAAGCCGTAAAGGCACGCAAAAGCGAGGAAGGTCTATTAGACACAGCGCGAGAGTGTCCTCACTGTGATGAAAAGCAGCCGAATCTCGCGGCGCACAAAAGTCATCTTCTTCTTTGTCATCCAGAGCTTTGTCATCgGTGTCCTCGATGTGGCACGCTTTTCGCACTATCACAAGACGTCACTAGGCACACGCGAGAGGGTAATTGTTTGAAGAATGACGCACTGAACGCTGCTGAGACTGAAAGTAACGAGAAAGAATGGAAATGTAAGGATTGCATCTTTTCCACGGATTCCAAAGCCGAATTCATTTTTCACGAAGCCCTGCATGCCGGTGCCGTTCAAGAAACGGATAAAGAGGCGTCCAGTTCGAGCAAATTACCGAAATATAAGTGCCCGACTTGCGGAAAGATTTTTCCAAAAACATCACTACGAAATCACATCAGGCAGCATACTGGAGAAAAACCCTTTCCCTGTATGAAGTGTTCGATCTCATTCTCGAGAAGATCGCACCTCATTATTCATCAAAGGATATGCAACACTTCGTCGAAATCTCTGGACAAAACTGGCCGTCGGCGGAGCTTCATCTGTTCACATTGCAAAGAAGGTTTCTACACAAAACATGCCCTTCGACAGCACATGCTGCGACACGCTGGTAAGAAGTACAAGTGTGGCCTTCCGGGTTGTCCAACGATTCTTCGTACTGCAACCGAGCTCAAGACCCATCGAAGGTTGGTCCATGACAACATTGAGAAGCAGTATTCATGTCCTGATTGCTCTTACGCCGCTAAAACGAAAACCCAATTGCGCAGGCATAGAATACGGCACGAAGATTCCGCGAACACCGAGAAGATTCAAATCCATTCCTGCACTTATAAAGGCTGCAATTTTAAGACGAAACTCGGTTCGAATCTACGGAGACACGTGCGACTGCATACAGGTGTCAAGCCGTACAAGTGTCGACATTGTCCCTATGCCAGTAATACTTTGGAAAATCTCCGGAAGCACATACTATCGACGAATTTACATCCTGGTAAAACGATTTATGAATGCGAATTTTgcaaaaaggagaaagaaaaagagatggaTCCATTCTGCACAAATTTTGCCAAAGAACTTCGTGCTCATCTGCTGGAAGCTCACATTGAAGACTTTCCTACACCAAATGATGCGAACAACTATACGAATAACATTTTTAgaccaaattaa
Protein Sequence: MEGFEEDDDTHFCIKCNLTIHGLDNYVQHRRSGCRSSDAKIEIVHESPSTPTVSYPEFLNADAFFSSLELQSNTRRAPTLLDNRKFKKDDKRKKEQKGQVDGDEAGTKDKLHSMLPAVSDLDEPPDMCIQSLKQTTLDRKRHENQQSWLDDTILADLSLGNSATKKLARYDFEYDDSEDDILEEELGEDSYSDSDDGENPQEGPPRDHTGGKWKPGLDDLPQDTPHMHEEDAEPDNDHQEHPPPTYTGGKWRPAETSQKVEEYESKDTSGQPPPGYTRGKWVPGARTDIESGYWCNPCGRKLASRLVYNRHLLSDLHARRSIRELDGEALHLRRGINSHARVSRRVSTRKKTSRTKEEPEQKKVKKGLRQREKEILLCEMCRTRVRRPQMGKHLLSHYHCRVSGVLVNPRNPSVRRFLLEHIANVVRQSPFQCAPCRFYCNTEETFLLHWRSDLHSKTVEQIGGSCRCTPCNFWCADNATMESHLLSTSHRDVVSMMKGSVPVVISRQRMLSCCSCDRQFRYNFQLRLHAKETGHTASDTASDVYQQRIKCDICSQVLRSLVALQRHQLTSHIAKDKEKGEDTADARPAPYFCSFCSMNFTTAQEAVLHRRTSSHKEAVKARKSEEGLLDTARECPHCDEKQPNLAAHKSHLLLCHPELCHRCPRCGTLFALSQDVTRHTREGNCLKNDALNAAETESNEKEWKCKDCIFSTDSKAEFIFHEALHAGAVQETDKEASSSSKLPKYKCPTCGKIFPKTSLRNHIRQHTGEKPFPCMKCSISFSRRSHLIIHQRICNTSSKSLDKTGRRRSFICSHCKEGFYTKHALRQHMLRHAGKKYKCGLPGCPTILRTATELKTHRRLVHDNIEKQYSCPDCSYAAKTKTQLRRHRIRHEDSANTEKIQIHSCTYKGCNFKTKLGSNLRRHVRLHTGVKPYKCRHCPYASNTLENLRKHILSTNLHPGKTIYECEFCKKEKEKEMDPFCTNFAKELRAHLLEAHIEDFPTPNDANNYTNNIFRPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423280;
90% Identity: iTF_01523658;
80% Identity: -