Tcor000828.1
Basic Information
- Insect
- Trachymyrmex cornetzi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001594075.1
- Location
- NW:164238-214193[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-18 4.2e-15 54.6 0.1 1 45 560 605 560 605 0.96 2 2 7.6e-18 7.6e-15 53.8 0.0 1 43 984 1027 984 1029 0.95
Sequence Information
- Coding Sequence
- ATGGCGGATTGCCCCTATGCCCGCTGCATACAAGAACGCAGACACATCCGACGGGAGCTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTCGGTCTGGAACGGGTAGCGGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCACAGCCCCACCATCGGCTTTACCCGGCGTTGTCGTCGTCCTGCAACCCGATACCCGGGAGCCTGGACCAGATTGGGCCGCAGCTGCATCACCCGGCACCCACGTCGTTGTCGTCGACGGTGCTAACGACGGCGACGAccacgacgacaacgacgacgacgacgcttGCGACCGGTGTGGTGAAACAGGAGAGTCTGCAGAGGCATCATCTGCAGAACCACCATCACCTACCCGCGCCGGTTCAGGACCATttacagcagcaacagcaggaGGATTCGCGCCGTCTAAGGCCGGGCGAAGTCAAGATCGAGGCCGCCGACGAGGAGCTCACAGACGCGGGTGCCGCGCGGGAGGACACCTCGACGAGGACGACGGATACGGCGACGTCGACGACGGTGACGACGACGGCGGAAGTAGCGACAACGACGGCAACGGCAACGGCGACGACCATCGGCATCGCGACGACCACGTCGACGACGACAACAGCGACCGGTACGACGACGATAGCGACGAGACGGCGACGTGGACGCCGGCAAAACGACGGGGAGGACGTCGACGGGGAGGAGGACGGCGAAGAGAACGACGAGGAAACGGGACGGGGCCAGAACGAAGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGCGGTCAGCCCTCTCAGAACGGAAAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGACACGGAAGGGACCAAGGAACGAACGGAGGAAATCGCGTTGGAGCGGGCACCGGTAACGCAGGGCTTACTGAGGGTAAAGAAAGAGGAGGAGCTGCAGGAAGTACCGGGTTCTGGCGGTACCACGATACTGACGACACCGGCGACGAATTCGGAAGGGACCAGGTCGGGGCTGTTATGCCGCGACGGGAACGCAGCCGCGACGAGCGTCGCGACGCCGTTTCTCCTTGGAAGACGCACGAGCCCACCGCCGGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGTCTCGACGGCAAGCTAACCCACGACGACCAGCCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCGGAGTCACCGATGTCGGTCCAGGTGGATCCGATGGCGGCGTCCGTGGTCGCCGCCGCTCTCAGCGGCACTTACCCCACCTTGCTGCCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTTGTTGGGGTGCAGACCCATCAGGACAGCGCCGCGGCGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCAGAAATTCTCAGGACAACAACATATCTCTATTGGAGCAACAGAAAATACCTCTGAGAATGCCGACAGGCATCGATCCCAAGACTATCCTGAACTCGTGTTACCGCGCGAAACCGCGAATGACCGGACCGGTTGTGAccgcggcggcagcggcggcggcggctgcGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGGACTTATACCGAGGAGGAACTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCAGCGGTAATCTACGGGATACCGCGTAGTACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccactactACTACTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGACAAAGAATTATCCGGTGCAGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTGAAGCCTCTGCTGTCGTTGGAAGATCTCGTGAGGTTTTCTACACTCGAAGGGACTGGTGGTGATTCCCTCAGAAACTTGTTGCAACGAGGACATGAGACAGGAGCCGAATGGCCGGGATTTGATCACGCGAACATCGGTCCCTATATTCAGAAGATGTTGGCTGCCGCTGCACCATTAGGCATGGACACGCGAGACTATCGCATACCCGAAGTAATGAGGAAGCTGATGAGCGAGGACAAGAGACTGAACAAGAACGTGAACGGTGACCAGTCACAGCCGCATCACCATCAGCACCATCCTCTCGCCGCACATCAGCAGTCACAGTCGCAGCAGCAGCAGCGAGGGCCCATGACGAACGACGACTTCAATCCCAATATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATATTGAAAATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAACAAGAACGGCGAGCCGACTTCCGCCGCATTCGCCCAGAGCTTCGCGGCTGCCGCCTCGAGTCCGGGCCTTCTGGAACGAGCTAGTCCAGCGTTTTCCAGTACCAGCAGCCCCACGAATTCGCTGGTAGGCAAAGCGGTGGCCGTCAATTTCCGCGACGTCATCGCCAAGAGCATTAGCGTCAAGTTCCAAGAGGGTCAAACGCCCAGCGCGGCTGGCATACCGGGCTGCCAACCAGCCGGTGTGGTTCCATCGCAGCAGGCCATGATAACAGACCCGAGTCCATTCAAGAGGGGTCGGTACACACCTCCACAGCCGccacaacaacagcagcagtCGTCGGCGCAGCAATCGCAATCCAAGCAGCAGTCGCAAGAGGCGAACAAATCGAAACCGGGTACTGGCGGCAAGGGCACCAGACCTAAACGCGGAAAATACAGAAATTACGACAGGGATAGCCTTGTCGAAGCGGTACGCGCAGTTCAGCGCGGCGAGATGAGCGTGCATCGTGCTGGCAGCTTTTATGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTGAAGCCGCAGAAACCGTTCACACCGCCCGGCGGTATACCCGGTCCGAATGGACTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCATTCGGACCCTTCAACTTCTGGAACCCGACGCCCTTCATGCCCTCCCCCTTTATGGGTGGCGCGCCGAACGTGCCGATCCTTCCGGAACAATATTTCGCATCGCAGAGAATGCGTGGGCTGCAGGAGCAACAACGAAACGCCACGATGGTACAGCAGCAGCATCAGCAACGAGACCGAGATGGAGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGGCGAAGGCGCCGCGTGA
- Protein Sequence
- MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSGTRSSESQPHHRLYPALSSSCNPIPGSLDQIGPQLHHPAPTSLSSTVLTTATTTTTTTTTTLATGVVKQESLQRHHLQNHHHLPAPVQDHLQQQQQEDSRRLRPGEVKIEAADEELTDAGAAREDTSTRTTDTATSTTVTTTAEVATTTATATATTIGIATTTSTTTTATGTTTIATRRRRGRRQNDGEDVDGEEDGEENDEETGRGQNEAEKRLKLDEDADRSAVSPLRTENDRATRDHPTANATDTEGTKERTEEIALERAPVTQGLLRVKKEEELQEVPGSGGTTILTTPATNSEGTRSGLLCRDGNAAATSVATPFLLGRRTSPPPEDWKPLDKCYFCLDGKLTHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSAAAADQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVVTAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGTGGDSLRNLLQRGHETGAEWPGFDHANIGPYIQKMLAAAAPLGMDTRDYRIPEVMRKLMSEDKRLNKNVNGDQSQPHHHQHHPLAAHQQSQSQQQQRGPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSNKNGEPTSAAFAQSFAAAASSPGLLERASPAFSSTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPSAAGIPGCQPAGVVPSQQAMITDPSPFKRGRYTPPQPPQQQQQSSAQQSQSKQQSQEANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSXXXXXXXXXXXXXXTEAAETVHTARRYTRSEWTENASVHGGHAPPAIRTLQLLEPDALHALPLYGWRAERADPSGTIFRIAENAWAAGATTKRHDGTAAASATRPRWSWRIRNGRRGRNFELSKRFDGEGAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00730649;
- 90% Identity
- -
- 80% Identity
- -