Fsel027723.1
Basic Information
- Insect
- Formica selysi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_009859135.1
- Location
- CM020809.1:9948071-9990508[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 9.7e-15 54.8 0.1 1 45 554 599 554 599 0.96 2 2 6.6e-18 1.7e-14 54.0 0.0 1 43 982 1025 982 1027 0.95
Sequence Information
- Coding Sequence
- ATGGCGGATTGCCCCTATGCCCGCTGCATACAGGAACGCAGACACATCCGACGGGAGCTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTTGGTCTGGAACGGGTAGCGGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCAGCGACGGCACAGCCCCACCATCGGCTTTATCCGGCGTTGTCGTCGTCCTGCAACCCGATACCCGGGAGCCTGGACCAAATTGGGCCGCAGCTGCATCATCCGGTACCATCGTCGTTGCCGTCGGCGATAGCGTCGACGGCGCTGACGACGGCCAcaacgacgacggcgacgactcTCGCGACCAGTGTGGTAAAGCAGGAGAGCCTGCAGAGGCATCACCTGCAGAACCACCATCACCATCTGCAAGCGCCGGCCCACCAGGATCACCATCTGCAGCAGCAGGAGGATCTCCGCCGCTTGAGGCCGGGCGAGATCAAGGTCGAGGCTGCCGACGAGGAGCCCGCGGACGGTGTCGCGCGGGAGGACGTTGCCATCGCGAGAACGACGGACACGGTGACGTCCATAACGGCAACAACGACGGGAGCGACGACagcgacgacgatgacgacggcGACCGCGTCGGCGACAACAACGGCGTCCGGCACGACGACTATAACGACGAGACGGCGACGCGGACGTCGGCAGATCGACGGGGAGGACGTCGATGGCGAGGAGGACGGCGACGAGAACGACGACGAGACGGGACGGGGCCAAAACGAGGTGGAAAAACGGCTAAAGCTCGATGTGGACGCCGACAGATCGGCGGCCAGCCCACTCAGGACGGAAAACGATCGTGCGAATCATCCGATTGCCAACGCTACCGACACGGAAGGGACCAAGGAACGAACGGAGGAGATCGCGTTGGAGCGGGCACCGGTAACGCAGGGCTTACTGAGGGTAAAGAAGGAGGAGGAGCTACAAGAAGTGTCGGGTTCTGGCGGCGGTACGACGATACTGACGACGCCGGCGACGGATTCGGAAGGGACCAGGTCGGGGCTGTTATGCCGCGAGGGGAACGCAACGAGCGTCCCGGCGCCGTTTCTCCTTGGAAGACGCATGAGCCCGCCGCCGGAGGATTGGAAGCCGCTCGACAAGTGTTACTTTTGCCTCGACGGCAAGCTACCCCACGACGACCAGCCGCCCCTTAGTCCGCAGAGCGACAGTGGCAGCAGTTCGCGATCGGCGGAATCACCAATGTCGGTCCAGGTGGATCCGATGGCGGCGTCCGTGGTCGCCGCCGCTCTCAGCGGCACTTACCCCACCCTGCTGCCCCAATGGTGCTTACCGCCGAGGGAGGCACCCCTCGTTGGGGTGCAGACCCACCAGGACAGCGCCGCGGTGGCCGATCAACCGCTCGATCTCTCGGCCAAACCCAGAAATTCTCAGGACAACAACATATCCCTACTAGAGCAACAGAAAATACCTCTGAGAATGCCGACAGGCATCGATCCCAAAACTATTCTCAACTCGTGTTACCGCGCGAAACCGCGAATGACCGGACCAGTTGCGgccgcggcggcggcggcggcggcagctGCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGTGGCAGGAGGACTTACACCGAGGAGGAACTGCAGGCCGCTCTTAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCGCGTAGCACGCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCagccaccaccaccaccaccatcaccaccaccaccaccaccactactactactactactacaaCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGGTGGACGACAAAGAATTATCCGGCGCGgaagaagagaaggaagtcgAGAAGGCCCTGTTGAAGCCTCTGCTTTCGTTGGAGGATCTCGTCAGGTTCTCTGCGTTCGAAGGTACCGGTGGTGATTCCCTCAGGAACCTGTTACAACGGGGACACGAGACAGGAACTGAATGGCCGGGATTGGAACACGCCAACATTGGTCCTTACATTCAGAAGATGTTGGCTGCCGCTGTGCCATTagGACTGGACACACGAGACTATCGCATACCGGAAGTGGTGAGGAAGCTGATGAGCGAAGATAAGAGGCTGAACAAGAATGTGAACGGCGATCAGTCGCAGTCGCATCATCAGCACCATCACCATCCCTTAGCTGCGCATCAGCAGACGCAGTCGCAGCAGCAGCGCGTACCCATGACGAACGACGACTTCAATCCCAACATCGAGGAGGAGGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAGGGTTTCGCGGCTGCCGCCTCGAGTCCGGGTCTTCTGGAGCGAGCTAGCCCAGCCTTCTCCGGCACCAGTAGCCCCACGAATTCGCTGGTGGGCAAAGCGGTGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGTGTTAAATTTCAGGAAGGCCAAACACCCGGCGCGGCCGGTATGCCGGGTTGCCAATCGGCCGGCGTCGTTCCGTCGCAGCAGGCCATGATGACGGATCCGAACCCGTTCAAGAGGGGTCGTTACACGCCCCCGCAACCGccgcagcaacagcagcagcaacagccgTCGtcgcagcaacagcagcaggcCAAGCAGCAGTCGCAAGACGCGAACAAGTCGAAGCAGGGCACCGGAGGCAAGGGTACCAGACCGAAACGCGGCAAGTACAGGAACTACGATAGGGATAGTCTCGTCGAGGCGGTACGCGCGGTACAGCGCGGTGAGATGAGCGTGCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAG
- Protein Sequence
- MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSGTRSSESATAQPHHRLYPALSSSCNPIPGSLDQIGPQLHHPVPSSLPSAIASTALTTATTTTATTLATSVVKQESLQRHHLQNHHHHLQAPAHQDHHLQQQEDLRRLRPGEIKVEAADEEPADGVAREDVAIARTTDTVTSITATTTGATTATTMTTATASATTTASGTTTITTRRRRGRRQIDGEDVDGEEDGDENDDETGRGQNEVEKRLKLDVDADRSAASPLRTENDRANHPIANATDTEGTKERTEEIALERAPVTQGLLRVKKEEELQEVSGSGGGTTILTTPATDSEGTRSGLLCREGNATSVPAPFLLGRRMSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSGSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSAAVADQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSAFEGTGGDSLRNLLQRGHETGTEWPGLEHANIGPYIQKMLAAAVPLGLDTRDYRIPEVVRKLMSEDKRLNKNVNGDQSQSHHQHHHHPLAAHQQTQSQQQRVPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAASSPGLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPGCQSAGVVPSQQAMMTDPNPFKRGRYTPPQPPQQQQQQQPSSQQQQQAKQQSQDANKSKQGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476095;
- 90% Identity
- -
- 80% Identity
- -