Basic Information

Insect: Trachelus troglodyta
Gene Symbol: stc
Assembly: GCA_030142635.1
Location: JARQTJ010000733.1:435779-440165[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 2e+04 -4.3 1.6 15 19 534 538 533 538 0.81

2 15 0.17 1.7e+03 -0.7 0.1 4 10 567 573 566 574 0.94

3 15 2.4e-06 0.024 14.8 11.3 4 18 584 598 582 599 0.94

4 15 3.9e-05 0.38 10.9 16.8 1 18 635 652 625 653 0.87

5 15 0.45 4.5e+03 -2.0 1.3 1 10 662 671 662 671 0.73

6 15 9.9e-10 9.8e-06 25.6 11.6 1 19 691 709 691 709 0.96

7 15 0.47 4.7e+03 -2.1 1.4 5 10 738 743 738 743 0.96

8 15 0.00071 7 6.9 15.3 4 18 756 770 749 771 0.86

9 15 2 2e+04 -4.6 1.6 5 10 800 805 800 805 0.90

10 15 0.0091 89 3.4 11.1 1 11 811 821 811 833 0.88

11 15 7e-11 6.9e-07 29.3 14.0 1 19 838 856 838 856 0.98

12 15 1.4 1.4e+04 -3.6 0.5 6 10 885 889 884 890 0.70

13 15 2 2e+04 -4.9 7.6 10 19 903 913 892 913 0.81

14 15 1.2e-06 0.011 15.8 14.3 1 16 949 964 949 975 0.85

15 15 7.5e-06 0.074 13.2 13.7 1 19 981 1000 981 1000 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	2e+04	-4.3	1.6	15	19	534	538	533	538	0.81
2	15	0.17	1.7e+03	-0.7	0.1	4	10	567	573	566	574	0.94
3	15	2.4e-06	0.024	14.8	11.3	4	18	584	598	582	599	0.94
4	15	3.9e-05	0.38	10.9	16.8	1	18	635	652	625	653	0.87
5	15	0.45	4.5e+03	-2.0	1.3	1	10	662	671	662	671	0.73
6	15	9.9e-10	9.8e-06	25.6	11.6	1	19	691	709	691	709	0.96
7	15	0.47	4.7e+03	-2.1	1.4	5	10	738	743	738	743	0.96
8	15	0.00071	7	6.9	15.3	4	18	756	770	749	771	0.86
9	15	2	2e+04	-4.6	1.6	5	10	800	805	800	805	0.90
10	15	0.0091	89	3.4	11.1	1	11	811	821	811	833	0.88
11	15	7e-11	6.9e-07	29.3	14.0	1	19	838	856	838	856	0.98
12	15	1.4	1.4e+04	-3.6	0.5	6	10	885	889	884	890	0.70
13	15	2	2e+04	-4.9	7.6	10	19	903	913	892	913	0.81
14	15	1.2e-06	0.011	15.8	14.3	1	16	949	964	949	975	0.85
15	15	7.5e-06	0.074	13.2	13.7	1	19	981	1000	981	1000	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGATGGTTCGTACTATGAACCTGATGATCCCAACTATCATCCATACTCCAATCACGGTGATGCAGGCCCTGGAGATCAAACATGGGGTTACTATgctggaaataatttttctcgtaCAAGAGGTAATCTTTATACTTCGAGTGGATCTAGTGCTTTTGATCAGAATAGAGCTGTACCCTTTCAACAAACCAGTAGAACCAACGTTCCACCGGTTCAACAAAATGTAGCACCATTGTCTGTCTATCAAGAGCAACCAATACCCTCGCTTCTGGAAAATGTTAATCAGTGTTTCTTTGAGAATAATAGAGTACAACCACAGCTTCCATCGTTCAATTACAAAAGTAGTAACTATGGAGGATGGAGTAAGAACGATAATACTGATTCTAAGTACCCAGGACAAGTGAAGAATTCATATCCAAATGTAGCAGAGTATTCAAATCTGCATGTTACTGCTGGTGAATTTATACCAAACAGTGCAAAACCAAATTATTCAGAAGCACCAATTGCCAGTCTAAATAGTGCAGGGAATCAAACTAATATACAATGCGAAGCTACAGAAACGCATCATGGAAATGTTACTGCCACGGTAGAAGCAGGGCCATCTAATGTCTTCTTCAACAAAAAGAATAGCAATTATAGGCAACGCGAACCACAAGATCAGCAACATAATCAGAATGGCTTCCATAGGAATTCTTACAAGAATCAAAATCCCAAGAATTATGGCAAGTTTCAAAATGATAGATATAACAATGGTAGACAATATTCCGATGGTAATAAATATTCCTCTGGATGGAGGgacaatgaaagaaaaaggcaAAACGTAGATCAGTCAGTTTCTAATACCACCAATGGAACTAGAGACACTTTTGGAACAGCCTCAATGTcaaaggatgaagaaaaacaatacaCTAATGGAAAGCTAAATAAGAACGGTACTAAAAGCTTGCCTTATAATGATTCCCTGTCTTATCAACATAAACAAGAAAGTTCAAGACAACCAGgcaaattacgaaaattaccCAAGTACAATTATAACGCTAGTAGTAACGAGCCCAGTTCGTCTAGTCACAATTCGGAGCAGCCTCAGTCCTGGataaagaatggaaaaaagtaCTTCACCGATGATCGTCCTGAAAGGTATCGTGATAGAACAGAGCGCTACAGTGACAGATACGATAGTGGtcagagagagaagaggaatAATTACCAGGATTACGATGgacacaaaaataattatgatgtGAGCAGCGAGAGGAGTGAAAGAAACAGAGATAAAGAGCGTAGCAAGAATAGTGCCCGAGAGAACAAAGATAAAGACAATGAAAGTTGGAGGTCAAAGAATGAAACTAGCAGCAGGAGTGGTACTCCAAAACGTAGTGGCAACAAGAAATACGATACAGACGATAATGCCAGTCAAAGGGAAAGGTTAACAGAACAATTAAATAGAGGACAACTCGAATGCCTAGTATGTTGTGATCGTATAAAGCAAACAGATCATGTTTGGTCGTGTTCCAATTGTTATCATGTATTGCATTTAAAGTGCACTAAGAAATGGGCCAAATCATCGCAGAGTGaaaatgGTTGGCGTTGTCCGGCCTGTCAGAACGTAACATCTGTGATAccagaagaatatttttgcttCTGCGGAAAGGGTAAGACGCCAGAATGGAATCGTCGTGAGGTCGCTCATTCCTGTGGGGACGTCTGTGGACGTATGCGAGCAAATACCAACTGTGTTCACAAATGTACTTTACTTTGTCATCCTGGTCCTTGTCCTTTATGTATCGCTATGGTGACAAAGTACTGTGGTTGCGGAAGGACGTCGCAAACACTCAAGTGTGGCACCGCGACGCTCTTGATCTGCGAGGCCACTTGcggtaaattattaaattgcgAGAAACACACCTGTGAAAGAAAGTGTCATCACGGCAACTGTGAAAAATGCGATAAAACCATACACCAAGAATGTTTCTGTGGCAAACATAATCGTGAGGTTACTTGCGAAGTCGATGTTCCTTCTACGTACACATGCGGGAACATTTGTGAGAAACTTTTAGACTGTGGCAATCACAAGTGCAAGGCTCTATGCCATCCTGGACCTTGCGAATTTTGTTCCCTGAAACCGGAAGCTGTCACTCATTGCTGCTGCGGACAGACTCCCTTGACGGAGCAGAGAAAAAGCTGTTTAGATGAAATACCAACGTGTGAGAAGATCTGTTCCAAGCGTCTAAAGTGCGGCCAACCAAGTCATCCTCATACATGCAAGTCAAAGTGCCACGAGGATGATTGTCCAGAGTGCGAATTGATCACAAAGGTCAAATGTCGCTGTGGCAACATGGACAAGGAAATTCCTTGCAAGGAACTAACGACAAAGGCCGATGATGCTCGTTGCGAGAAAAGGTGCAGCAAGAAAAGATCCTGTGGTCGACATAAGTGTAATCAAATGTGCTGCATCGATATTGAGCATATTTGCCCATTACCTTGCTCCAAAACATTAAGCTGCGGAAGGCATAAATGTGAGCAGACTTGTCATAAAGgaAGGTGCCAGCCCTGCTGGAGAAGCAGTTTTGATGAACTTTTCTGCGAATGTGGTGCTACTGTTTTATATCCTCCAATTCCTTGTGGCACGAGACGTCCCGCCTGTGACAGACCTTGTTCACGACAACACGCGTGTTCGCACGAGGTGTTGCACAATTGTCACAGCGAAGCTACGTGTCCTCCGTGCACTGTGCTCACTCAAAATTGGTGTTACGGTAAGCACGAGTTGCGCAAAGCCGTGCCGTGTCATGTGAATGAAATATCGTGCGGTTTACCATGCAACAAACCAATATCATGCGGACGACATAAGTGCATTACACTTTGTCACGCTGGACCTTGTGAAAAACCAGGACAAGTGTGTACGCAGCCATGTACCACACCTAGGGATTTATGTGGACACATTTGTGCTTCTCCTTGTCACGATGGAAAATGTCCGGATACTCCATGTAAAGAAATGGTCAAGgTTACCTGTCAGTGCGGTCATAGAAGTATGACTAGAGCTTGTGTTGAGAATTCGCGCGAATTCCAAAGAATAGCCAGTGGTATACTTGCCAGTAAAATGGCAGATATGCAACTTGGTCATTCGGTGGACTTGGAAGAAGTCTTTGGCCAAGGTGCGAAGAAGCAGAATCAGTTAAAAACTTTAGAGTGTAATGATGAGTGTAAGGTTATTGAAAGAAACAGGAAACTGGCTCTGAGCTTGCAAATTGTCAATCCTGATCTGAGTGGCAAGCTTATGCCACGGTATAGTGACCTGATGAAACATTGGGCCAAGAAGGATCCTTTCTTCTGTCAAATGGTCCATGATAAATTGACGGAACTAGTTCAGCTGGCTAAAACGTCTAAGCAGAAGTCAAGGAGTTATTCCTTTGAATGTATGAATCGAGATAAGCGACACTTTGTTCATGAATACTGCGAACAGTTTGGCTGCGAAAGTCAAGCTTATGATCAGGAACCGAAGAGGAATGTTGTTGCTACTGCTGTGAAGGATaagTGTTGGATGCCGAGTCTAAGTTTATTAGAATTAGTACAACGGGAAAGTGGTCAAAGGAAGGTACCAGGCCCTATGCTCAATACTTCAAAAGCTAACTGCTCTCTAAGAAACGTCGAAGTTCTCCCCTTGCCCGCTAAGAAAGGCCACAAACTCGTGTCGATGCCGTCGACTTCAAAGTCGAAGATTAGTCAAAGATGA
Protein Sequence: MATWDGSYYEPDDPNYHPYSNHGDAGPGDQTWGYYAGNNFSRTRGNLYTSSGSSAFDQNRAVPFQQTSRTNVPPVQQNVAPLSVYQEQPIPSLLENVNQCFFENNRVQPQLPSFNYKSSNYGGWSKNDNTDSKYPGQVKNSYPNVAEYSNLHVTAGEFIPNSAKPNYSEAPIASLNSAGNQTNIQCEATETHHGNVTATVEAGPSNVFFNKKNSNYRQREPQDQQHNQNGFHRNSYKNQNPKNYGKFQNDRYNNGRQYSDGNKYSSGWRDNERKRQNVDQSVSNTTNGTRDTFGTASMSKDEEKQYTNGKLNKNGTKSLPYNDSLSYQHKQESSRQPGKLRKLPKYNYNASSNEPSSSSHNSEQPQSWIKNGKKYFTDDRPERYRDRTERYSDRYDSGQREKRNNYQDYDGHKNNYDVSSERSERNRDKERSKNSARENKDKDNESWRSKNETSSRSGTPKRSGNKKYDTDDNASQRERLTEQLNRGQLECLVCCDRIKQTDHVWSCSNCYHVLHLKCTKKWAKSSQSENGWRCPACQNVTSVIPEEYFCFCGKGKTPEWNRREVAHSCGDVCGRMRANTNCVHKCTLLCHPGPCPLCIAMVTKYCGCGRTSQTLKCGTATLLICEATCGKLLNCEKHTCERKCHHGNCEKCDKTIHQECFCGKHNREVTCEVDVPSTYTCGNICEKLLDCGNHKCKALCHPGPCEFCSLKPEAVTHCCCGQTPLTEQRKSCLDEIPTCEKICSKRLKCGQPSHPHTCKSKCHEDDCPECELITKVKCRCGNMDKEIPCKELTTKADDARCEKRCSKKRSCGRHKCNQMCCIDIEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELFCECGATVLYPPIPCGTRRPACDRPCSRQHACSHEVLHNCHSEATCPPCTVLTQNWCYGKHELRKAVPCHVNEISCGLPCNKPISCGRHKCITLCHAGPCEKPGQVCTQPCTTPRDLCGHICASPCHDGKCPDTPCKEMVKVTCQCGHRSMTRACVENSREFQRIASGILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKVIERNRKLALSLQIVNPDLSGKLMPRYSDLMKHWAKKDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFECMNRDKRHFVHEYCEQFGCESQAYDQEPKRNVVATAVKDKCWMPSLSLLELVQRESGQRKVPGPMLNTSKANCSLRNVEVLPLPAKKGHKLVSMPSTSKSKISQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131248;
90% Identity: iTF_01473596;
80% Identity: -