Basic Information

Insect: Trachelus troglodyta
Gene Symbol: KBTBD4
Assembly: GCA_030142635.1
Location: JARQTJ010000376.1:1546655-1548878[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 7.4 9.7e+03 -3.5 0.3 31 40 181 191 181 191 0.88

2 5 3.7e-06 0.0049 16.7 0.0 2 38 200 236 199 242 0.86

3 5 2.4e-10 3.2e-07 30.1 0.0 5 39 253 286 250 293 0.85

4 5 0.092 1.2e+02 2.6 0.0 21 34 320 333 306 338 0.80

5 5 4.5e-12 5.9e-09 35.6 0.0 3 39 363 399 348 405 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	7.4	9.7e+03	-3.5	0.3	31	40	181	191	181	191	0.88
2	5	3.7e-06	0.0049	16.7	0.0	2	38	200	236	199	242	0.86
3	5	2.4e-10	3.2e-07	30.1	0.0	5	39	253	286	250	293	0.85
4	5	0.092	1.2e+02	2.6	0.0	21	34	320	333	306	338	0.80
5	5	4.5e-12	5.9e-09	35.6	0.0	3	39	363	399	348	405	0.94

Sequence Information

Coding Sequence: ATGTCTGAAGTTGCCAGTCAACCTCAAATTGACCAAAGCTACTGTTTCAAATGGGGCGATTATCAGAATCATTTATCAGGCGTTATTCGCCAGCTGCTAGAGGAAGATTGTATGGTGGATGTAACTCTCTCTGCAGCAGGAGAACGTATTCATGCTCATCGGATTGTCCTGTGCGCTTGTAGCACATTGTTTCAAgaaGTCCTTAGTCAAGTCAATGAAGATCATCCGACAATTATATTAAGTGATATATCTCCTCAAGATGTGAGATCTATTGTAGAATTTACGTATCATGGCGAAGTACGTATACCTGTAGAGAATATTAGCAATTTATTGGATGCAGCACATTCTCTAAAGATTTGTGGCCTTATGGagattgATGGTTTGGATGAAAATGATGCATCCACCAGTACAAAAGACTTTGGTGATGATAGTATAGAGCCATCAACTAAATTGAATGAAACGGAAGATAAAGTTCTAAGTGCTTTGGAAAGTGAATATGATAGTATTACTGATAGTACCGAACAGAACGTACCTGGAGTTTctactataaataaaaagaggaagagaagacGTGATAtaataaagagagaatataGTGAAGATATGCTTGTATCAGCTATCAATGATTTACGTTCTGGACAGACGCTGATAGAAGCttctacaaaaaataatattccccGTTCTACACTGTATATGCGCGCTAAAGCATTAGGAATACATTTAAATGCTACGAGAAATGAATATCCTGCAGAATGTATGAAAGCTGCTATAAATACTGTTATTGgaGGTTCAAGTTTGCAACATGCATCAGAGATGTATAGTATTCCCAAAACTGTTCTATGGAGACGTATACAAAAGGAAGGATATCAAATTTTGCGTTCTGAAATGAAAAGATCATATGGCTCTGATAAAAGAGAAGCAGCTGTCAAAGCTCTGGAAAGGGGAGAAAACCTGACTAAAGTGGCACTTGAATTTCAGATTCCAAAAACGACATTGTTTAGAGACAAGGCCAGATTGGTAGACGAAGGTAAATTACCACTATCATTCTGGAAGAAGCGTAAAACAGAAAATGAGGAATTGAAAAAGACACGCCTAGAAGAAGCAGTAGCTGCTTGTAAGGGAGGCAAAATGTCACAAGCAGCAGCATCAATGACTTATCATATCCCAAAAACAACTATATGGCGACGTCTACAACAAGATGGAAAAAAACATAATCGAACATCAAATAGTAAACGACAGCAGAGATTGACAAACACAAATGAAGAAACACAGGAGAAGCCACAGGAAGGATCTGAATATGCTTTTTGCGAgGTATCTTCGGAAATTCCAATAGCATACATAGATGAGAATAGCATCCCTGAAGACTCTGTTATCATTTTGACTACTGATGACGTGGAAGCGATTAACTTGGGGGAGGGTAGACAAATTATCATTAGCTCGGGGTCTGGTCAAGAGTATGTTCCTTGTACTTTAAGTGTAGAAGATAATGCAAATTACATGCCAGCTGAGAGTTAG
Protein Sequence: MSEVASQPQIDQSYCFKWGDYQNHLSGVIRQLLEEDCMVDVTLSAAGERIHAHRIVLCACSTLFQEVLSQVNEDHPTIILSDISPQDVRSIVEFTYHGEVRIPVENISNLLDAAHSLKICGLMEIDGLDENDASTSTKDFGDDSIEPSTKLNETEDKVLSALESEYDSITDSTEQNVPGVSTINKKRKRRRDIIKREYSEDMLVSAINDLRSGQTLIEASTKNNIPRSTLYMRAKALGIHLNATRNEYPAECMKAAINTVIGGSSLQHASEMYSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKTRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKHNRTSNSKRQQRLTNTNEETQEKPQEGSEYAFCEVSSEIPIAYIDENSIPEDSVIILTTDDVEAINLGEGRQIIISSGSGQEYVPCTLSVEDNANYMPAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01538095;
90% Identity: iTF_00293633;
80% Identity: iTF_01475585;