Basic Information

Insect: Trachelus tabidus
Gene Symbol: ttk
Assembly: GCA_030142655.1
Location: JARQTI010000807.1:1225723-1240085[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.3e-06 0.00012 22.8 2.5 1 23 582 604 582 604 0.98

2 8 2.1e-05 0.0018 19.0 1.5 1 23 610 632 610 632 0.98

3 8 2e-06 0.00018 22.2 0.3 2 23 641 662 641 662 0.98

4 8 8.3e-06 0.00071 20.3 0.1 1 23 668 690 668 690 0.98

5 8 2.2e-07 1.9e-05 25.2 3.0 1 23 696 718 696 718 0.98

6 8 4.6e-06 0.00039 21.1 2.1 1 23 724 746 724 746 0.98

7 8 8.3e-05 0.0071 17.1 7.7 1 23 752 774 752 774 0.98

8 8 0.0001 0.0088 16.8 1.5 1 21 780 800 780 801 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.3e-06	0.00012	22.8	2.5	1	23	582	604	582	604	0.98
2	8	2.1e-05	0.0018	19.0	1.5	1	23	610	632	610	632	0.98
3	8	2e-06	0.00018	22.2	0.3	2	23	641	662	641	662	0.98
4	8	8.3e-06	0.00071	20.3	0.1	1	23	668	690	668	690	0.98
5	8	2.2e-07	1.9e-05	25.2	3.0	1	23	696	718	696	718	0.98
6	8	4.6e-06	0.00039	21.1	2.1	1	23	724	746	724	746	0.98
7	8	8.3e-05	0.0071	17.1	7.7	1	23	752	774	752	774	0.98
8	8	0.0001	0.0088	16.8	1.5	1	21	780	800	780	801	0.95

Sequence Information

Coding Sequence: ATGATGGGCGAAGTAATAAGAGTTTCCGGCCGGGCACCGGACGTTGGGGATTTCCTGCGTGAGGCCATGATATCACAAAGATTTGCGGATGTTTCTTTATGCTGTCACGGTGGACAAAGATTTCTTGCTCACCGTTTGGTACTTTCTGCCGCCAGTCCATATTTGCAAGAGGTCCTACTTGCGCACAGTCGTGCCACCGGACACTGCGAACccattacaattattttggcGGAGGTCGAGGGCCCCGAATTGGCGGCCATACTTGGTTTCGTGTATACCGGAAGCGCCGCGGTACCAAAGGGACGATTGGATGCCTTCCTAAGAGCCGCCAAGGCTCTGAGCATTAGATTGCCACCGCTACCGGAAATGATAACGTCTTGTATGGACGATTTCAAAGTGGAGGACTTTAAGGATGTCAAAGTGAACGCACGTTATCTTAGATGCGAGCAATATCCTTGTCATGACGATTGGTGTCACGCGAGGACCTTCGACAGAAATTACTGTTCTTCAAATTACACCGACAAGTATCATCGCGCGTTACCGATGTTGTGTGAAGGAtcactaaataaaaaaatttgtaactcATCCAAGGACGAATCGCTCGATGCGTTTCCTGTCGGAATGACCGAGGCTGCTTACGCAACCAGAAGTAAAAACGGCAggataattttggaaaagaatttgaaCCGACTGGATTACCCTCAGGAACCGGTGAGcgaaagaattttggaaaattcggaAAAAATCAGCGAAACTCATTCCTTCGTGAAGATCCCCGAGGCCAAGGACTTTTCAATGGGATTGTTGGGAGCTTCCGGAAAAATGATGGAAATTGACGAATTACCCGGAAACATTCAAAATCCATCAAGGATCTATGAATCATCGCGAGAGCCCGATCGCATCTTAGAAAATTTACTCGAGTTACGTGTTCCTACGATCCGATCCAAGGTCGATCTTAAGGATCGACAGGTCTCTACGTTACAAATGGGCGAAGATTTAACCTGTCGAGAAAGATGCTGCAGATGGAAATATCAAAAGAGACACGTAGCCAACAGAGTCACAGCATCCCCATGGAGGCAACTAGCTAGACCACATCATTCCCCAAAAATGCAACCGATAGTACTTCGAAATTATCCCGAAAGGatcgAATCCGGAATAACCCGCGATTTTGGAGCTGATCGATTCCCAGTAACTTCCGGTATTACTTCGAAGGACTCTTGCAGCACGGTTGCCGAAAAACCGTGCGCAcacgaaattttcgaatgcGAAAAACGAATTTCCGGCGAATTCGAAATTTACATGAGAAAAGACGAAGCTATTTCACGTCAAGACTTTAGCTCAGGCCAGACGATCCATGTGAACGTAACGAATCCGGAATGCAATTCTCAAAATATCGGTGAAGTTTCTACctattttcaaagttcaacCCAAGTCGCGACACCCTCGCAGATTTTATTGTCTGCTGTCGACAATCATGCGAAGTGCACCGACGGCATAGGAAACGCAGGAATTTTGAATAAGAGTCCTACACCAACTTTAAAACCAGAACTGTCGTTACCTGTCAGTAGACTGTGCGACTCGACGCCCGATACGGCCAACAATGCAACTAGTACGATCACTGTTCCTACCGTGGATAACGAAAGACCAAATTCAATTGACAAAACTCACCGGAAGCACAGTGACAGTAATAACAACGAGGCGTCATCAGGCGATCATCGAATTCCCACAGTAAACACTGACGATCACAGATGCGATCAGTGTGGAAAGACTTTCGTGACCCGAGCTTCGTTAAAGGTACACAGTCGCACGCATTCGGGCGAAAAACCGTTCAGGTGCGCTGATTGCGGCAAGGAATTTTCGCAATTGCGAAACTACAAGTATCACCGCAGCGTCCACGAGGGAACGCGTGAGTTCGCAGCGACGTGTCCCGAGTGCGGTAAATACTTCAACGATCGTGGCTACCTGAGTTCACACATGAAGATCCACCGTAATCGTAAGGAGTACGCATGCGGCGAGTGCGGTAAGAGTTTCAATCAGCGAGTGGCGTACAACATGCACGTGCGGATACACACTGGGGTGAAGCCGCATCAGTGCGATCAGTGCGGCAAGGCGTTCTCACGGAAGATGCTGCTGAAGCAACATCTCAGGACGCACTCCGGCGAGCGTCCTTATCAGTGCCAGGTCTGTCACAAGGCATTTGCTGATCGATCGAATATGACCTTGCACACGAGGTTGCACTCGGGCCTTAAGCCTTATCAGTGCACATTGTGCACCAAGGCGTTCACGAAGAAGCATCATCTCAAGACTCATCTCAATTATCATACGGGAACTAAACCGTACTCGTGTCCTAATTGTTCCTTGAGATTCTCACAGAGCAGCAACATGCGTACGCATTACAAAAAGTGTACTGTCAATAATCCTAATGGGATACAGGCGAGCGCGGAACAGAGAGCCAACGATAAGGATACCGACACAGCATCATTGGTCCATGCGACCGGCAGAACTCGTAGCGCTGCACTTACGCCACCTAATTCGGATCAGGAATCCGGTATATATACGCCCGTAGGGAGAATCGTTACGGAAATTAGGCAGTCTTAg
Protein Sequence: MMGEVIRVSGRAPDVGDFLREAMISQRFADVSLCCHGGQRFLAHRLVLSAASPYLQEVLLAHSRATGHCEPITIILAEVEGPELAAILGFVYTGSAAVPKGRLDAFLRAAKALSIRLPPLPEMITSCMDDFKVEDFKDVKVNARYLRCEQYPCHDDWCHARTFDRNYCSSNYTDKYHRALPMLCEGSLNKKICNSSKDESLDAFPVGMTEAAYATRSKNGRIILEKNLNRLDYPQEPVSERILENSEKISETHSFVKIPEAKDFSMGLLGASGKMMEIDELPGNIQNPSRIYESSREPDRILENLLELRVPTIRSKVDLKDRQVSTLQMGEDLTCRERCCRWKYQKRHVANRVTASPWRQLARPHHSPKMQPIVLRNYPERIESGITRDFGADRFPVTSGITSKDSCSTVAEKPCAHEIFECEKRISGEFEIYMRKDEAISRQDFSSGQTIHVNVTNPECNSQNIGEVSTYFQSSTQVATPSQILLSAVDNHAKCTDGIGNAGILNKSPTPTLKPELSLPVSRLCDSTPDTANNATSTITVPTVDNERPNSIDKTHRKHSDSNNNEASSGDHRIPTVNTDDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKEFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYACGECGKSFNQRVAYNMHVRIHTGVKPHQCDQCGKAFSRKMLLKQHLRTHSGERPYQCQVCHKAFADRSNMTLHTRLHSGLKPYQCTLCTKAFTKKHHLKTHLNYHTGTKPYSCPNCSLRFSQSSNMRTHYKKCTVNNPNGIQASAEQRANDKDTDTASLVHATGRTRSAALTPPNSDQESGIYTPVGRIVTEIRQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00253719;
90% Identity: iTF_00253793;
80% Identity: iTF_01474839;