Tsti001692.2
Basic Information
- Insect
- Trachelus stipa
- Gene Symbol
- JARID2
- Assembly
- GCA_036026315.1
- Location
- JAYRCB010000103.1:25275-32009[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8 2.1e+04 -3.5 0.2 61 82 160 179 146 180 0.58 2 2 1e-22 2.5e-19 70.0 0.0 6 89 1350 1431 1346 1431 0.94
Sequence Information
- Coding Sequence
- atggTCTTAAGTCGAAATgacaagagaaaaaggaaagaaggagatCTTGTGGATCTCATGGATCCACTATCAGAATCACCCAATAGAACAAAGGTTCATGCGCAAAGAAAGTTTGCACAAGGAGCAGCAACAGTCTTTAATCCTGCACATACTCctatcaaagaaaaagagaaggtgAAGCCTGCTATGATCACAGAATTGATCACACATAAACGCCCAAACACTGAAGACTTCCTTACATTTCTTTGCTTTCGAGGCACACGAATATTACCGCCAAGTCTTAATTTCTTCAACGTTGGACCTAAGAAAGGTTCTTCAGATCCTGACCCAGAACAGGCATCAACGGATAATAGTCCGTCATCATCAACGATGTCAACACCATCGATAGAAGTGCCAAAGGTGACGTGTCAGAAATCTCCAGGTAAAATAAAGAGCAGCataactgaaaagaaaaaggtacctcacagaatacaaaaaaatattaacaaatacaaGACAACAACATCCACAGTTCAAGCattgaagaaaaagtatcAGGAACAGCGTCTTGCCAAACaaaggattaaaaataaattcaaagccTCGTGCGTAATGAGAACGCGCTCGGCGACCGAACAGgcaattttaaaatctacCAACAAACTGGCACCAAGTAAATTCGTTCCTAAGGTTGAGACAAAAAGACACGGTTTACGAAGCAGCGCACTTGCAGATAAAACAAAACGCGCAAATCTAACAAAAGTTAAACCAGTAGCGTCGAAACCAAAAAAGAGGAGTATTACAAGGGATAAGAGTAGTGGTTCTTCGGATACCGAATCGTCGTCAGAAGAAGATGTGCCTCTCGTAAAACCAACGCCGCAAATAAAGCGCCCGTTAAAATCCACAGTTCCCAAAAAGATCTGCACCAGGAGCAAATCGGAAATGCGAAGAATAACGAGATCGCACAGTGAAACTATTTCTGCACAAACTTTATCCAGGCGACCAtctagaaaaacaaaagaagctGCTGCCGTTTATATGGAGATCCTTGGAAGAAAGTTAATTAGTCCTGACTTAGAGAATGATGATAATCTATCAGTGGACAGTTTTCCCGAATTACCAAACGCTCGTAGAATCGCCCAAACGGAGATAGAGATCAGAGCGAAAGTAAAGCAAACGACAAAACTGAGCACtaataaagaaagtaaaaacgaAGCTTGTACTAACAATATCAAACGTGCTGATAAAAGTAAAccagaaaaaattgtaacgaaGAGCAAAAGGCTGATGAGAGTACAAAAGTATTGCGAGTTAGATAGCGAGGAAGAATCAGAAAGTTCCGTTGAATCTAATCAAACACGACCTATCACCAGACGAAGTgttagtaaattaaaaaaaacaatttccagGAGCCTAAGGTCCTCCTCACGGAATGCTACGGCGAAACCTGAGCctcaaaataatacaaagagcAATACAAGCAAAGACAAAGCCATGGTAAAGCGTAAGCGAGAACAAATTACTGCCAAAGTGCCAcctccaaaaaataattcaacgaAGCAAAAGGTGCAAAAGAATAAAGCTGAGAGTATAGAATCGGATGAAGAAACATTAGGAATGCTATTAGATaaactgaaaagaaagaaagagtctAAGGAAATGGATACACAAGCTTCTCGTACAGATCGGAAGAagacagaagagaaaaatgaaaatgtaccTCCACCGGAAGTTATGAACAACAAGCTTGACTCTTCTAAGATATCGGACGATGAGGAATCTTTCAGaggattttcgaaaaaggcaatttcaaaagttcttAATTCCTGCCACACTCACGTCAGTGCCAATCTCCTTGCGTCTGAAGAAGCTGATGGGAAAATGGATGTGCTTAAAACACAAGACACGCCCCAAACCAGCAATTCGGATtcgaaggaaaagaaatatacgaTTATAGAAAATGATAGTTTAACGCCTGTAATAACAATACCAAGTTATCCCTTCGTTAAACCTGTACAAGAACTAACTATTAATTTGGATCACGAAACAGTGACCAATTTGCAAATACCAATTGTGACAAAGTTAGATAGGAAGTGTAATCATGATTCAAATGATACTACGATTAACATCATTGATATGCCATTACCAACATCTTTGGCACGTAAAGAACGTGTTAACATGTCAACagaacaaattgaaaaatggctCAATGAAAGTTCAATGGctaaagaagaaagtaaagtCGAAATGGAAACAGTGTCGAACTTTAAATATGACATTGGTGAAAAAGTCAAGACAGATATTACGCATTTATCAATTCCCACTAGAATTCAGCATTTAGTACGTCCTGTTAATGTGACACTTTCAAAGCTAGCTGAGAAAGCAAACTCAAAGGATCGTATAGCTTTACAAAGTAGAATTATACCAACGCTTATAACAGCTACTCAATCCATTCCATTCAAACTACAAAACATACCAACTaacaggaataaaattaatgctgACATTAAGGAGATTATTAAAGGACGTAATATGAAAACTAGTAAAGATTCTTCTCTAGGAGATGACAGTGATGCTGTGTCAAAGTCTGATCAGAATTCAGTGGACGGTTCACCCGAGAAAAAATCATCTCCAGagaagaaatcaatttttcaactaCGCAAACCCTTTCTACCCAAGGTCAAGGAGCGCAAGGGTATAACCCCAAATGCTAATGCATTTTCCCCAGAGAACGAAAGTAGTGTTTATGCTTTTGAGAGTGATACAGAAACTCCCATAAGTACGCCATTCCGGCGAAAACTTAAAGAAGGTAATAAGGCAAACTCTGTTTGCTCAACTACAGAGGATGAGTTGATGAAAGCTGTGGAGGAAGTAGTGAAACCCAACGaggaatcattaaaaaatgaagacgAAGCGTTAAGAGCTAATGATATTATAGTTAAAACTGAGAAGGAGCAACCAGTTATTAAAAATCCTGTTGCTTCAACTACGATAAGTGTTAATAAGTTTCAACTGCCGAAGAACTTTGCTAGCTTAGCTAATGTTCAAGTTTTGCCATTAGATAAACTTACAACAAGTTGGAGCAATGTTAACTGTAGTGCTTCTATAGCAGTCCAGGTTAACCTTGACGAACAGTCCCAGGATCCACAACTGGTAGTGAGTGAGGAGAACGGTCAACAAAAGAGTACTGAGATATCCACTCAGACAGAATgtaataatgacaatgatgatgataatgatggaCAATTATTCTACATTCCATTACAAGCAGTAACAAGGAATGGACCAAATTTAGTCCAAGGTCAACAATTGATACAAGGAGTTGCTGTTAAATTGGGAACCGAGGGCCCAACTGGACCCAATCAAAGAGTACTATTACGTGCTAAATTGGTTACCAAACCACCTGTATCTGTTGTACGGTGTCCTCCAGTTGGTACGGTACAACCTACAACTCGTGCACCACCAACTTCTTTAGCGCAGACAACTGTGGAACAACCGATTGTTTCAACGTCTGTTATATCCACACCGTCAACTTCTGCTTTTCAACAACCTCCGTCTATAGTGCAAATTTCAACTAGACAGACTACTTCTAATCAACAAAATTCTAGCAAACAGGCAACTACTGTAATAGCAACGGCAACAACAACTACGACAACTACAGTAACATCTTTTGAGTCAAAAGTTACGAAATCCCCAAAAATGaccagagaaagaaaagcttCCGTTGATTCagtgaaaaatggaaaaagGTCACAGTCGAAAACCAAGCATAAAATCTCCGAATTCTGCTCACCCACTAACGACACTACATTTCCAATTGTGCTAGAGTCAAGTAAAGAAGCTCGACTTGTGGAAGCTCCAACTTTTCATCCAactgaaaaagattttcaagacCCACTGGAATACATTGATAAGATAAGACCGATCGCTGAAAAATTCGGTATTTGCCGCGTGGTACCTCCGCCAAATTTCAAACCGGAATGCAAGGTGTCCGATGACATGCGATTTACAGCGTACAATCAATACGTGCATCGTATGCTTCATAGATGGGGACctaatgtaaaagaaatgatgGCTATAAAGAAATATCTGGCTACACAAAGCATAACTTTAACTCATCCACCATGGatcGGTGGCATGGAAGTAGATCTACCACATTTATATCAGACAGTACAAAGTTTAGGTGGACTGAAGGAAGTcattgagaagaaaaaatggcagAAAGTGGCTGACGGTATGAAAATACCAAAATCTGCACAAGATCGCGTAACTAAATTGGATGATATCTATTGTAAATACTTATTGCCCTACGACACGTTATCACCGgaggaaagagaaaaattatttgatgaaGTGGAATTAGAATGGACGAAACACGAGAGCAAAGCATTAATGAGACAAGATGCTCAGTCCAATGATAACgatgaggaggaagaggaggacaGCTCTGACGAAATCGAAGAATGCATCGTGAAAGGTAGAAACATGCCGCTCAACGCTTTTTACCGAATTGCACGCAACACGCAACGTATGTGGTTCGGTGAGAATCAGCGTTCCGGAAGTGAAGCAGAGGGTGCTTCGGCAGATGAAGTGGAGAACGCATTTTGGAAACACGTTGCCGAAAGGAAGCGTCACGTCTGCGTCCACGCGGCCAGCATAGACTCCAGTGGCCGTGGCTTTGGATTCTCTGTTGCTAAGAACAGCCCCTTTGCCAGGCACCCTTGGAATCTTAAAGTGCTTACTAACAATGCTGGGTCGGTGCTCAGAGCTTTGGGACCACTAATGGGTGTAACTGTACCAACGCTCCACGTTGGGATGCTGTTCAGTGCCTGCTGTTGGTATCGGGATCCACATGGCTTACCTTGGATAGAATATTTGCATACAGGcgctaaaaaaatttggtatgGGATACCTGACGAGCACAATAATAACTTTAGGGAAGCACTCTCGAAAATGGTACCCAGGTACTGCAAGAATAAAACTATTTGGTTGCCATCTGATACTGCCATGGTACCACCAGAAATGTTAGTCAAGAATGGCGTACCTCTATGTCAGACAGTACAGGAACCTGgtcaatttataattgtatttcctAAAGCATTTACTTCGAGCATTTGTACTGGTTATGTGGTCTCAGAGAGTGTGTATTTCGCGCAGTCTTCCTGGCTGGAAACTGCCGAACAAGTGTTCAAGgACATACAAGACAGTTGTGAACCAACAATATTCTCTTTCGAAAGACTACTGTTCAGTATTATCAATGATTCTAGATCTCATATCGATGTACTTAAAcagattttaccAAGTGTCATAAAAATTCGTGATCGAGAAATAGACTATCGTAAGCAGTTAGAGTACTTGGGTCTGACCAATACTGAGAAGCTACCACTGCCTGATAgtggaaaacgaaaaaaagggaaaaaggtgAATGACGACGATGGTGATTTTGAATGTGAAACTTGTCGGACCAacttgtttgtttctttggtGAACAATTCGCAGGATGACAGTGTATACTGTCTTCCGCATGCACTTCACTTGCTTATCAGAAAGAAACAAGTTCTTAAGCATTGCACACTTATGTACACCTACAGTGAGGACGAACTGGACGACCTGATTCACAAACTTGAAGACAGGATCGAAGCCAAATCTAAGAAGACTAATCAAATCAGAcaagctaaataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMDPLSESPNRTKVHAQRKFAQGAATVFNPAHTPIKEKEKVKPAMITELITHKRPNTEDFLTFLCFRGTRILPPSLNFFNVGPKKGSSDPDPEQASTDNSPSSSTMSTPSIEVPKVTCQKSPGKIKSSITEKKKVPHRIQKNINKYKTTTSTVQALKKKYQEQRLAKQRIKNKFKASCVMRTRSATEQAILKSTNKLAPSKFVPKVETKRHGLRSSALADKTKRANLTKVKPVASKPKKRSITRDKSSGSSDTESSSEEDVPLVKPTPQIKRPLKSTVPKKICTRSKSEMRRITRSHSETISAQTLSRRPSRKTKEAAAVYMEILGRKLISPDLENDDNLSVDSFPELPNARRIAQTEIEIRAKVKQTTKLSTNKESKNEACTNNIKRADKSKPEKIVTKSKRLMRVQKYCELDSEEESESSVESNQTRPITRRSVSKLKKTISRSLRSSSRNATAKPEPQNNTKSNTSKDKAMVKRKREQITAKVPPPKNNSTKQKVQKNKAESIESDEETLGMLLDKLKRKKESKEMDTQASRTDRKKTEEKNENVPPPEVMNNKLDSSKISDDEESFRGFSKKAISKVLNSCHTHVSANLLASEEADGKMDVLKTQDTPQTSNSDSKEKKYTIIENDSLTPVITIPSYPFVKPVQELTINLDHETVTNLQIPIVTKLDRKCNHDSNDTTINIIDMPLPTSLARKERVNMSTEQIEKWLNESSMAKEESKVEMETVSNFKYDIGEKVKTDITHLSIPTRIQHLVRPVNVTLSKLAEKANSKDRIALQSRIIPTLITATQSIPFKLQNIPTNRNKINADIKEIIKGRNMKTSKDSSLGDDSDAVSKSDQNSVDGSPEKKSSPEKKSIFQLRKPFLPKVKERKGITPNANAFSPENESSVYAFESDTETPISTPFRRKLKEGNKANSVCSTTEDELMKAVEEVVKPNEESLKNEDEALRANDIIVKTEKEQPVIKNPVASTTISVNKFQLPKNFASLANVQVLPLDKLTTSWSNVNCSASIAVQVNLDEQSQDPQLVVSEENGQQKSTEISTQTECNNDNDDDNDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPVSVVRCPPVGTVQPTTRAPPTSLAQTTVEQPIVSTSVISTPSTSAFQQPPSIVQISTRQTTSNQQNSSKQATTVIATATTTTTTTVTSFESKVTKSPKMTRERKASVDSVKNGKRSQSKTKHKISEFCSPTNDTTFPIVLESSKEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVELEWTKHESKALMRQDAQSNDNDEEEEEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGSEAEGASADEVENAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPEMLVKNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQSSWLETAEQVFKDIQDSCEPTIFSFERLLFSIINDSRSHIDVLKQILPSVIKIRDREIDYRKQLEYLGLTNTEKLPLPDSGKRKKGKKVNDDDGDFECETCRTNLFVSLVNNSQDDSVYCLPHALHLLIRKKQVLKHCTLMYTYSEDELDDLIHKLEDRIEAKSKKTNQIRQAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01130593;
- 90% Identity
- iTF_01130593;
- 80% Identity
- -