Basic Information

Insect: Trachelus iudaicus
Gene Symbol: -
Assembly: GCA_030142595.1
Location: JARQTH010000585.1:221784-225269[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00013 0.0092 16.4 1.5 1 23 115 138 115 138 0.96

2 13 0.012 0.8 10.3 4.6 2 23 255 277 255 277 0.91

3 13 0.0009 0.062 13.8 1.7 2 23 339 361 339 361 0.95

4 13 6.5 4.5e+02 1.7 7.6 3 23 446 467 445 467 0.95

5 13 6.1 4.2e+02 1.7 2.9 1 23 517 540 517 540 0.94

6 13 1.6e-05 0.0011 19.3 0.1 3 23 589 610 588 610 0.95

7 13 0.027 1.8 9.2 0.9 3 23 637 658 636 658 0.93

8 13 0.0085 0.58 10.7 3.6 2 23 704 726 703 726 0.96

9 13 0.11 7.9 7.2 4.2 3 23 741 762 739 762 0.92

10 13 0.00021 0.015 15.8 0.2 2 23 807 829 807 829 0.93

11 13 0.053 3.7 8.2 1.6 1 23 914 936 914 936 0.98

12 13 0.00015 0.01 16.3 0.7 2 23 952 974 951 974 0.96

13 13 0.005 0.34 11.5 0.4 1 23 1043 1066 1043 1066 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00013	0.0092	16.4	1.5	1	23	115	138	115	138	0.96
2	13	0.012	0.8	10.3	4.6	2	23	255	277	255	277	0.91
3	13	0.0009	0.062	13.8	1.7	2	23	339	361	339	361	0.95
4	13	6.5	4.5e+02	1.7	7.6	3	23	446	467	445	467	0.95
5	13	6.1	4.2e+02	1.7	2.9	1	23	517	540	517	540	0.94
6	13	1.6e-05	0.0011	19.3	0.1	3	23	589	610	588	610	0.95
7	13	0.027	1.8	9.2	0.9	3	23	637	658	636	658	0.93
8	13	0.0085	0.58	10.7	3.6	2	23	704	726	703	726	0.96
9	13	0.11	7.9	7.2	4.2	3	23	741	762	739	762	0.92
10	13	0.00021	0.015	15.8	0.2	2	23	807	829	807	829	0.93
11	13	0.053	3.7	8.2	1.6	1	23	914	936	914	936	0.98
12	13	0.00015	0.01	16.3	0.7	2	23	952	974	951	974	0.96
13	13	0.005	0.34	11.5	0.4	1	23	1043	1066	1043	1066	0.98

Sequence Information

Coding Sequence: ATGACGTCCACACTATCGCGCGGTGCGATCCTGCCTGATCCTGGCGAGCTGGACAGCGACGGTTCGAGTGGAGAGGAGCGGGACGCCAGGAAGCGTCTCCACGGTGACCTGGACAGCACCGGTCCGAAGAAGCGACGGAAACAGACGACCCCGGTGAGGTTCCCGGCGTCGCTGATGACTGGTGAACGAGCGGAGTCCGaggacgacgtcgacgacgacgatgcgGAAGTCGACGAGGACGTCGAGGCTGAGCGGGAAGGTAAGCAGCAGCGTCGTTCTCCCCAGGACTCGGTCACCGGTGATCATCGAGTAACGAGCAAGGACGAGAACCTGAATAACGAATTCCGCTGCCAATATTGTAGTCAATTTTTCGATAACAAGGAAACTTTGAATCAGCATATAGATAGCGAGCACTATGTACAGTCGCGAGACCAGGTGCAGGTCAAATTAGAGCCGAGCCAGGAGCAGTCCGAGAGTCCTGTCAATCTGTCGGGACTCGGTATAAAGAGTTTCGCGGCATCTTGGTTGTCGGGCCAAGTTCAAGGTCAGCCACCGGGTCAGGTTCAGGTACCGAGCGAAGACTGGACGGTCGGTAATACAGTGGCACCCGTGAGCACGATACCAAATCATCTGCAGAGTCTGCCGTTTCCTGGTGCCCTGGCCCAGTATCTTCCTCTACCTGGTTTCACGCTGCCAGACTCGAGCCAGATATCAAGACCACCGATAGGTCCGGCCCCGGTACGAATATTCAATCCGGACGCCTACTGCGACCTCTGCAACAAGGAGTTCTGCAACAAGTACTTCCTGAAGACACACAAAGCTAACAAGCACGGCATCTACGTGGACTCGCCAGGTCAGCCGGCCACAGAATCCAATCTTGGTCCACCGGTTTACGGTGGCACGTTCACTGCCGGTAACATCAAGATGGAACAGATTCAGAGGTTAGACGTTGCAGCGgtaccgccgccgccgccgccgccgccgccgccgccgtgCATACCGACGCCCAGCGCCTCCTGCGACGTCTGTCAGAAGAGGTTCAAGAACGAGGAGTCCGTGAGGAAGCACAAGCAAAAGGTTCATTCGGAGAACAGTGAGCCTGGTGAGAGTCAGCCGATGCAATCTTTGGACGATGACCGGGACCAGAGCTATCACAGTCTAAGCCCAGGAGCTATGGAAGCACTTTTCAAGCAGGAGTTCGGCGTGGAGCAGGAAGACACGAGCTTCATGCCGGCGCCTAGACACCTGTCGCCCCAGTCGATTCAGCAAGCCAGGGATTCAGGCTTCAACGCGGATCGGCTACGTAGACTGGGTGTTATAAATCCTGACGCGTTCTGCGAGATCTGCTGCAAGGAATATTGCAACAAGTACTTCCTGAGGACGCACAAGATGAAGCGCCACGGTATCTACATCCAGGAGAGCGAGAAGTCACCCAGCAACCCTGGAGCAGCCGCCAGCTGGCACCAGGTGCAAACAAGTCCGCTCAACCTGATCGTGACCGAGACGACCGGGAACAGTTCGGAGTCCAGTGATCGACCCGGCGAGGAGCACGAGTGCAAGCCCTGCGGACTGAGATTTCAGACCAATGGATTGCATCAGGCGCACAGGCAGAAGATGCACGAGATAGAGGAGCAAAGGTCACCCAAGCAGGACTACGAGGTCGAGATCACGGATCAGCGACCTGACTCCATTTCCGAAGATCTTCAGAAGCTCCAGACAATGATCCTGCAACTGAACGGTTTGGAATCTAGTCGCGGTGCGCCCTGTGCGGTCTGtggaaaagaatttgaaaccCGATCGGCCCTCAGGACTCACATGACCAGCGATCACGGCGCCATCATCGAGGAGCCAACGTCACCGTGTCCGGTGACGGAGAAGTCGCCGACACCTATCGGCGGTACCGCGAACTGCACCGTCTGCGACAAGGAATATCTCAATCACGATCTATTGAGGAAGCACATCAGCGAGGAACATCAGAATCAGAATTGTACACCGGCGACGACGCCGCTTCCCCAGGCGGTGCCGATTCCTGTAACTACTACTCCGACGTCGGCGCCGGCGGCCCAGACCGAACGCAAGGCGTCGGTCTCCATGACGCCCACGTCCAGCTACTGTGAGATATGCAACAAGGAGCTGTGCAACAAGTACTTCATGAAGACTCACATGCAGAGGATGCACggtattgaaattgaaaacggGGCCCAGATCGGTGGCGttatatgcaatatatgtaACAAGGAACTGTGCAGCAAGTACTTCCTCAGGGTTCACAAGCACAACACGCACGGTATCGTCGAAGAGGGCACTTCCGGTTCGACGAAGCAAGAATCATACGAGTCCTCGAACAGCGAAGACTCGGCCTTGAAACCCGAACAGTTAGGTGACCTGAGTCACAGATACTTCACCCACTTCACCGAAGTGTGCCCGATATGCAGCAGAAGATTCAGGAGTACGAAATGGCTGAAGGCTCATCTGCTGGGTGATCATGGCAAGGCAGGGGTGGAAAAATGGCGTGAATTGGAACAACAGTACCAATCGGCGCCACGAGGTGGGAGCAGCGGCGGCAGTAACAATAGATCGGCGGGACCCTCGAGGTCCGCGCATCAGAATTCTAGCCTGAAAATACCGAACGGCCTGGAACTGGGTCAGCACGTTAAATCCACCGATTACACTGGTCTTGGCAATCAGGTACTGTCGAACTTATTTGGTACCGGTTCCGACGATCAGCAACTCAAGAGCTACAGGTGTTCCTACTGCAACTTCACGACGACGGTGCTGCCATTTTTGTTCCTTCACGAAAGGTCTCACGTGAGTCCTCAGGGCGGGACTGGCCTGGACAACGACAGGGGACTCCAATGTCCAATCTGCTCCCAGGGATTTCCACAGCCTGAACTCCTGCACCATCACCTCCTGACTCAACATCAGTTTCCTGGACTGCTCACGCAGTTCCAACCGCCGACGCTGAACAACGTCGTGCCTGAGATAAGCGTCGATAAGCATCAAGTCGAAACGAAGGATCAGGATCAGAAGGAGGAACGTCGGCAGAGCAGTCCTCAGACGTCATCAAGTTTGGAGGTTAAACAAAAAGGCGAGGAACCCGCGGTCCAGGTGACACCTCAGGGCGCCTATAAGTGCGCCCAGTGTGGTTACGCCACTGCCAACCTCAATAGGATCAAGAAGCACATCAGGAAGGATCACAAGACCCTCGGCGATCCTACCGATAGCGTGATAACGGAACTGAGCAAGACTCTCAAAGACGTCGCCAACAAGCACAAGGTGCCGGCCAGCTACGCGATGCCGCAGGACATGAATTCGAATCCCGACAAGACGATAATGCAGCCGTTCCTTATAGAGGAGTGCGACCTCACGACGCCCGGCGAAGAATCAAGCTCGGAGAGACGCTTCGCGCCGGCCCTCATTTATTTGCCTGTTAAATCGCGCATAAACGGCCCCTTGACTGCGTCCTTTACACTGAGTCCCGCCTGA
Protein Sequence: MTSTLSRGAILPDPGELDSDGSSGEERDARKRLHGDLDSTGPKKRRKQTTPVRFPASLMTGERAESEDDVDDDDAEVDEDVEAEREGKQQRRSPQDSVTGDHRVTSKDENLNNEFRCQYCSQFFDNKETLNQHIDSEHYVQSRDQVQVKLEPSQEQSESPVNLSGLGIKSFAASWLSGQVQGQPPGQVQVPSEDWTVGNTVAPVSTIPNHLQSLPFPGALAQYLPLPGFTLPDSSQISRPPIGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGQPATESNLGPPVYGGTFTAGNIKMEQIQRLDVAAVPPPPPPPPPPPCIPTPSASCDVCQKRFKNEESVRKHKQKVHSENSEPGESQPMQSLDDDRDQSYHSLSPGAMEALFKQEFGVEQEDTSFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPDAFCEICCKEYCNKYFLRTHKMKRHGIYIQESEKSPSNPGAAASWHQVQTSPLNLIVTETTGNSSESSDRPGEEHECKPCGLRFQTNGLHQAHRQKMHEIEEQRSPKQDYEVEITDQRPDSISEDLQKLQTMILQLNGLESSRGAPCAVCGKEFETRSALRTHMTSDHGAIIEEPTSPCPVTEKSPTPIGGTANCTVCDKEYLNHDLLRKHISEEHQNQNCTPATTPLPQAVPIPVTTTPTSAPAAQTERKASVSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVEEGTSGSTKQESYESSNSEDSALKPEQLGDLSHRYFTHFTEVCPICSRRFRSTKWLKAHLLGDHGKAGVEKWRELEQQYQSAPRGGSSGGSNNRSAGPSRSAHQNSSLKIPNGLELGQHVKSTDYTGLGNQVLSNLFGTGSDDQQLKSYRCSYCNFTTTVLPFLFLHERSHVSPQGGTGLDNDRGLQCPICSQGFPQPELLHHHLLTQHQFPGLLTQFQPPTLNNVVPEISVDKHQVETKDQDQKEERRQSSPQTSSSLEVKQKGEEPAVQVTPQGAYKCAQCGYATANLNRIKKHIRKDHKTLGDPTDSVITELSKTLKDVANKHKVPASYAMPQDMNSNPDKTIMQPFLIEECDLTTPGEESSSERRFAPALIYLPVKSRINGPLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00253103;
90% Identity: iTF_01474985;
80% Identity: -