Basic Information

Insect: Trachelus iudaicus
Gene Symbol: Hr39
Assembly: GCA_030142595.1
Location: JARQTH010000581.1:173092-176581[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2 1.8e+04 -8.5 16.2 70 164 214 317 183 419 0.60

2 3 3.7e-08 0.00033 20.2 0.0 1 21 517 537 517 541 0.92

3 3 2.3e-70 2.1e-66 225.0 0.0 197 408 698 902 676 902 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2	1.8e+04	-8.5	16.2	70	164	214	317	183	419	0.60
2	3	3.7e-08	0.00033	20.2	0.0	1	21	517	537	517	541	0.92
3	3	2.3e-70	2.1e-66	225.0	0.0	197	408	698	902	676	902	0.94

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCCCAGGCTGGTGGCCTCCGGCACAGTCCTGGAAGTCATCTTCGTTGGGCGCACGCACCGAGGCTGGGAAGAACGTTTCCGTCACTACGATTAACGTACCACCGGCCCATGAGATGCATGACGGTAAGAGCGTCTGCAAGTATCTGGGAGGACAGAATGGCGTGACGGTTTCAGTGGTGTCCAGCTGCGGATCAGCTTCCGCTTCTGGGTCCAGTAATGTCGTCGGTACCGGAAACGCTGGCGAGTCCGGTTCCGTGGACGACGTTGAAGACAGTGACGGTGAGGTGAGCAAGATCGATTTCCGGGGTGTTAATCTGCGCACGAAGAAGAAACGGGATGCTTCCGGCGGACAAGAAAGTGAGAACAGTGCAATTGGCACTGACAATATTCAGCAGCAACCCGAAAGGCCAATGTCTTGGGAGGGTGAACTCTCGGATCAAGAAATGTCTTCCAATACTATCACGAATCAGGACCACGAAGAAACATTTATGGAGGGTGTACAAGTGTGCAGTGCGAGTCCTGGACCGCAGGAACAAAAGTTTCCAATAAAACCGGAGCCGGACTTTAGGTCAAGTCCAGGACTCGCTTTGGGCTCCCTTAATGAGACTGCCTTGCCGCTTACTCATGCTCAGCAactgcagcagcagcagcaacaacagcaacagcaacagcaacaacgtGGTCTGGATGGTCTCGAACAGACACAGCAGAGCGACCTACCTTTGCTTGTTGGCAAACTCCTAGGGGGTTATAATAGTTCAACCCCGAATCACAGTCCTGTACTAAATCCCCGGCATCATCTCACTAAGCACAGTCACACCCGGTCTCAAGTCCCTTCGCCGGATTCGGCGATTCACTCGGCCTACAGTGTCTTTAGCTCTCCCACGCAGAGTCCTCACGCGGCACGGCACTCTGCACTAGGTGCTGGCAGTCCTGTACCATCCTCATCGCTGTCACTTTCACGACACAGTTTCAATAATTCCACGTCTTCGttatccttgtctctctcgcactctctatCGAGGAACAATTCGGACGCCTCCAGTAGCTGTTACAGCTACGGATCCCTTAGTCCACCGACACACTCGCCCGTCCAGCAACCGAGGCATTCCCAtccgcagcagcagcagcatcatcaaGTTACTCAGGGCAGTCCTTTACATCTACCCGCAGCCACCGGTGCCACTCATCATTATTCCACCCCGGGATCGGAACTCTCGGAGGGTCTCGCAGAGGACCAAGAAGACTGTAGGATAGCGCCGGCACCCTCGGGCATCTCCACAAGGCAGCAACTTATAAATAGTCCATGTCCTATATGCGGCGACAAGATCAGCGGCTTCCATTATGGTATATTCTCCTGCGAATCCTGTAAGGGATTCTTCAAGAGGACCGTACAGAATCGTAAGAATTATGTGTGCCTGCGTGGCGCGGGATGCCCCGTCACTGTCGCCACTAGGAAGAAGTGTCCAGCATGCCGATTCGACAAGTGCCTGAATATGGGAATGAAGCTGGAAGCGATAAGGGAGGATAGGACTAGAGGCGGTCGCAGTACCTATCAGTGTACCTATACTCTACCTGCTAACCTTATCGGTGGGCCTGCTGGTGGCATTTCCGGTGATAAAATCACCGGTGGTACCTGTAGTCCAGCACCGCCGGGATCGGAGCATCATCACTCAATGAGATATCATTCAAATCATTCGCACAAGTTGCAAATGGTGCCACAGCTCCTACAGGACATCATGGACGTGGAGCATCTCTGGCATTACAACGACAATGATCGTATGACTAGTGGTCAGGGTAGTGGTATCAGTAGTGGTAACGGTAGTGGTAGCGctggcggtggcggtggtggtggtagcgGTAGCGTTACTGGTGTCAGTGGTAGTGCTAGTGGCGGTGGAAATTCATCCGGAGGCGGAAGTTCATCCGCCGTCGGAAGTAACGGGAACATACCTGGAGGAGAATCGTCGAGACCAAGTTCCGCGGGTCCTCCATCCTCCAATCACGAACAACATTCGCCACCGGCGAGTACCCCTAACTCGAATTCAACCTCCAATCCTAATGGAAATTCCACGCAGCATCCGGACTTTCTTTCAAATCTGTGTAACATCGCCGATCATAGACTCTACAAGATCGTCAAGTGGTGCAAGAGTCTACCGCTCTTCAAGAACATCTCCATAGACGATCAGATATGCCTTCTTATAAATTCCTGGTGCGAACTCCTCTTATTCTCCTGCTGCTTTCGCAGTATGAGTACGCCTGGTGAGATCAGGGTGTCCCTTGGCAAGTCGATAACTCTCGAACAGGCGAGACAGCTAGGTCTTGCGACGTGTATCGAGAGGATGCTGGCCTTCACAAATAATCTTAGACGACTCAGGGTGGATCAGTACGAGTACGTGGCGATGAAGGTCATAGTTTTGCTAACCTCCGACACCAGTGAACTGAAAGAACCCGAGAAGGTAAGAGCGTCCCAGGAGAAGGCTCTCCAGGCACTGCAGCAATATACAATCGCAAGGTATCCCGAGATGCCGGCAAAGTTTGGAGAGTTGCTACTCAGGATCCCGGACCTGCAGAGGACCTGTCAGGCCGGGAAGGAGTTGCTCAGCGCAAAGCGTGCCGAGGGCGAAGGCAGTTCTTTCAATCTACTAATGGAACTTCTACGAGGCGATCATTGA
Protein Sequence: MSEQNGPTEGPGPGWWPPAQSWKSSSLGARTEAGKNVSVTTINVPPAHEMHDGKSVCKYLGGQNGVTVSVVSSCGSASASGSSNVVGTGNAGESGSVDDVEDSDGEVSKIDFRGVNLRTKKKRDASGGQESENSAIGTDNIQQQPERPMSWEGELSDQEMSSNTITNQDHEETFMEGVQVCSASPGPQEQKFPIKPEPDFRSSPGLALGSLNETALPLTHAQQLQQQQQQQQQQQQQRGLDGLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHPQQQQHHQVTQGSPLHLPAATGATHHYSTPGSELSEGLAEDQEDCRIAPAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGPAGGISGDKITGGTCSPAPPGSEHHHSMRYHSNHSHKLQMVPQLLQDIMDVEHLWHYNDNDRMTSGQGSGISSGNGSGSAGGGGGGGSGSVTGVSGSASGGGNSSGGGSSSAVGSNGNIPGGESSRPSSAGPPSSNHEQHSPPASTPNSNSTSNPNGNSTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_00770401;
80% Identity: iTF_01473218;