Basic Information

Insect: Trabutina mannipara
Gene Symbol: L
Assembly: GCA_900080175.1
Location: FKYK01032638.1:9226-16152[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 3.8 3.2e+02 2.1 1.0 13 23 5 15 4 15 0.92

2 22 9.4e-05 0.0078 16.7 0.2 1 23 21 43 21 43 0.98

3 22 6.1e-06 0.00051 20.4 1.5 2 23 60 81 59 81 0.97

4 22 0.47 39 5.0 0.1 3 23 105 127 103 127 0.88

5 22 0.00099 0.083 13.4 0.4 1 23 172 195 172 195 0.93

6 22 0.0014 0.12 13.0 0.5 1 23 308 330 308 330 0.95

7 22 0.00096 0.08 13.5 1.4 1 23 354 376 354 376 0.98

8 22 6.6e-06 0.00055 20.3 0.3 1 23 384 407 384 407 0.96

9 22 0.0063 0.53 10.9 0.6 1 23 412 435 412 435 0.92

10 22 7.8 6.5e+02 1.2 0.6 1 23 442 469 442 469 0.80

11 22 0.012 0.96 10.1 0.8 2 23 489 510 488 510 0.97

12 22 0.0037 0.3 11.6 1.4 1 23 514 537 514 537 0.97

13 22 0.0001 0.0087 16.5 2.9 2 23 701 722 700 722 0.96

14 22 0.43 36 5.1 0.4 1 23 732 754 732 754 0.95

15 22 0.98 82 4.0 2.5 2 23 762 783 761 783 0.96

16 22 8.5 7.1e+02 1.0 0.4 3 23 807 827 805 827 0.93

17 22 0.0073 0.61 10.7 0.2 1 23 867 890 867 890 0.96

18 22 0.2 17 6.2 0.8 1 23 894 916 894 916 0.96

19 22 0.061 5.1 7.8 0.1 1 23 925 947 925 947 0.96

20 22 0.0017 0.14 12.7 0.3 1 23 955 977 955 977 0.97

21 22 0.42 35 5.2 4.6 1 23 984 1006 984 1006 0.94

22 22 0.014 1.2 9.8 4.7 1 23 1059 1082 1059 1082 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	3.8	3.2e+02	2.1	1.0	13	23	5	15	4	15	0.92
2	22	9.4e-05	0.0078	16.7	0.2	1	23	21	43	21	43	0.98
3	22	6.1e-06	0.00051	20.4	1.5	2	23	60	81	59	81	0.97
4	22	0.47	39	5.0	0.1	3	23	105	127	103	127	0.88
5	22	0.00099	0.083	13.4	0.4	1	23	172	195	172	195	0.93
6	22	0.0014	0.12	13.0	0.5	1	23	308	330	308	330	0.95
7	22	0.00096	0.08	13.5	1.4	1	23	354	376	354	376	0.98
8	22	6.6e-06	0.00055	20.3	0.3	1	23	384	407	384	407	0.96
9	22	0.0063	0.53	10.9	0.6	1	23	412	435	412	435	0.92
10	22	7.8	6.5e+02	1.2	0.6	1	23	442	469	442	469	0.80
11	22	0.012	0.96	10.1	0.8	2	23	489	510	488	510	0.97
12	22	0.0037	0.3	11.6	1.4	1	23	514	537	514	537	0.97
13	22	0.0001	0.0087	16.5	2.9	2	23	701	722	700	722	0.96
14	22	0.43	36	5.1	0.4	1	23	732	754	732	754	0.95
15	22	0.98	82	4.0	2.5	2	23	762	783	761	783	0.96
16	22	8.5	7.1e+02	1.0	0.4	3	23	807	827	805	827	0.93
17	22	0.0073	0.61	10.7	0.2	1	23	867	890	867	890	0.96
18	22	0.2	17	6.2	0.8	1	23	894	916	894	916	0.96
19	22	0.061	5.1	7.8	0.1	1	23	925	947	925	947	0.96
20	22	0.0017	0.14	12.7	0.3	1	23	955	977	955	977	0.97
21	22	0.42	35	5.2	4.6	1	23	984	1006	984	1006	0.94
22	22	0.014	1.2	9.8	4.7	1	23	1059	1082	1059	1082	0.97

Sequence Information

Coding Sequence: atggGGTTAGTGAGCGATCATTTGAAGATCCATTTGAAAACCCACGACAATCGAAAACCCTTCCAATGTACGCTATGCAACCGAGGCTACGGTACAGCGGCAGCGCTCACGTCGCATATGCAAAATCACAAAAGatcgaacgaaatttcaactcagCCTACACCAGTTGGCAGCATAAAATGTCACAAATGTTCGGAAACGTTTCGAGAACCGGAAGAATTACAAaacCACATGAACATGCATCAATCGCCGGAAAACGTACACAACACAAATAGTAAATCTTCGAAGAACACGTATGCGGCCATTTTAATATGCCCTTATTGCCGTAAGGATAATTTCTCGACGATGGACGCCCTACAGTCGCACGTCCAATCAGCCCATaAATCGATTTTCAACGGAGACCTGCAACGCGAGATTTCAAACCTGAAGCTAAAATCTCCAGCTCCAGCAGCCAGCCAGTTAAATTCGTCTTCGCCCTTAAACGTAACGCAGTCTTTCAATTCTCTACCGTCCTACTATTGCGATCAGTGTACCATGAATTTCTCGTCGCTGCAAGCTTTGCAGAAACACACGATCGCCGTTCACGGCTTCTCCAACATCACCTATAATAATCTGAAGTACTTGATGTCGTCGCCGGAGGTGTACAACAACGGCAAATTGTACTGCATGTATTGCGCGATGCAGTTCCTAACTCCGGCGGCTTACGCGGAGCATTATATCATTTTCCATAGTCCGTACCATCCTCAGTTGATAGGGCTAACTCCGCCAGAACAAATGAAACCGactgatttatcgaaaaaaacgtCTCCCGTTAAACGTTCCAATGTCGACGAGCAGCGGTCGTCGCCTCGTAAGAAGaataaaacgaacgaaaattccatttcgaaTTGCAGCAACCATCGGTACGGTTATCCGGGTCCATTTCTGTGCAATCAATGCAGCGCCGCTTTTACCGACTTCGAATCGTTTCGTGCTCATATTAAATTACACATCGAAGAAACCAGCGGAGGGTTATTGGGTGGCGCTTCACCGATGGAGCGTAAACGTACCTCGGCCGAATTTACGTGTCCTCATTGTCGATCTACTTTCTCgtcaaatgaagaaataagCCAACACATCGTGACGCATTTTCTATCCTCCGGCGTCAAATACAGCTgtgaaaattgccaaaaatcgTTCGAGAAAGCAGACGACTTGCAGAAGCATTTGATGGAAGTGCATGTCCATCATTTGTACAGTTGCTCCATTTGTAACGAAGTTTTCGATTCGAAGATGACGATCCAAtcTCATTTCACTGTCAGACATAGTAACGAAGCCAAAGTGTACCGATGTACGGGATGTTCATCTTCGTCCAGTATTGCCTTCCATTCAGAACTTGAATTTGCCAATCATGTGAAAACAATGCACGCCAGTAGTTCTCCGTTGTTGGCTCCTTTTGCGACGCatcatAATGCTCAAATGCAGAGGTGCTTCATTTGCCACATGAGTTTCCCAACCGAGTTGGAGATGCAGTTACATTTGGCAACGCATGGTAAACAATTCCAATGTACGTTGTGTCCTCAATCGTTCCATATCGAGTATTTACTGGATAAACATATGCAGAATGATCACAGCTCACCACAAATTAACGGATCATACGAAAATTGTCCGGACTCTGGCAACAAAGAATCATCGCCGATTCTGTCACCCAACAATCGTTTCGacagtcaaataaaaaagaacgaCAATTCCGAACCGAAAAGCAACTTCATCTGCTGtgatatttgtgaaaaatgcgATTTCTCATCTGAAAACGAACTTCTCAGCCATAAAAAACTACTCCATCATAAATTGTTGTCTCCTGTCAAGCACGAAAGCTCAGAAAATGCAGAAGACAGATTGAAATTATCTCAAAAACATAAATCGAATTCTTCATCTTCTTCGCCTACAATTCGAtgtgagaacaaaaaaatggaatcttTTAACGGCGACTCGAACGGAAATAGTTTGACATGTTgcgaaatttgcgaaaaacgaGATTTCGCTTGTGAAGCTGAATTATTATCGCATAAGAAGTTGATtcataatattaaattatcacCTCATGGAAAGgtaaGCTTAAATTGCGCGTACTGTAAAGAAAACTGCAAATCAAGATCGGACTTGGAAAATCATATGAAAACTCACTCTCAAAATTCGACATCTTCGGGAAAACATAAATGTATAATCTGTGATGAAATGTGTCCAACGGCTGCTGTTCTAGCTGAACATAAACTCACTCATTGCAAGGTTTTATCGGGAAAAACCTGCATGCATTGTAAAGGCTCGATTACAACCGAAGAGCAATTCTTTTCCCACATTCAACAACATAGTTCATCCCAAAACGGAACCACCAACAACAATAACTCATCTCAGAACTCTCTAGTTTTACCAACGTTCTGCGTAATTTGTCGACAAACCTTATCATCCGAGATGGAAGCTCGAATGCATGCCAGATTCCACCTACACCAGTCCGCCGACTTGGTACCGTGCTCTGTATGCTTCCATATGTCTGAAAGGCAAGATTTAATCGCAGGAATTTGCAAAGAGTGTTATCAAAGGCACGGCAAATCGTCACCTTTCAGGTGTCCAGAATGTCACATGAAGTTCGACAACGGTACAGCGATTGAAATACATTTGGCAACGGTGCACAGAAAAAGTTACCAGTGTATCAAATGCCAAGTGAGCTTCGATAACGAGAAAGAAATCCAACACCACGTCGCATCCCACGTAATGATTGACGGATTAAACGGTCACGAATGTCGACTTTGCAGATTAGTCCTACCCTCACCAGTTCAATTGCAAACACACCTTATCGAGCATACATTCGCTGGCTGCGCTACGTTCACGTGTTATTTGTGCAGTTCTGTGTTTACTACAGCTCAGGGCTTGCAGACGCATATTTTAGAGCACGGTTTAGCAGCTAGACCTTACGATTGTTCGAGATGTAAACAAAAGTTCTTCTTTACTTCCGAGCTAGAACATCATAGCTTCGTACATTTGGAGGAGTTGGCTCTAAGTGAAGGTCATGGATACTTCTACGGACAAGATAAAAACTTACTGAAAGATAAATCCGCTGCGAATATTCCGTACATTAATCATTCTATCTCATTAGCGGAGAATCTGTACAATAATAACAAAGAACCAAGCAATAAATACCATTGCACCGATTGCGGTACCGACTTCTTTCATGCGAACGATCTCTACGATCACAAAAATCGTTTCCATAACTCGGCTCAAACCGAAAGATACGTTCAAAATGGTGAACACAAGCGTCCTAAAAGGGAAACTCCCAACCCTACGGATGGCAACAGAGTTAAGTATGAAGAGCAAAATGACAACGTAGacgtagatgaaaaaattgatactaaACAGGCTGAATGTGAATCGGACGACGAACAGATCGATGTTGTTACTACTAAGATCGAAGAACCTAccgaaaatgctgaaaaaaacgacaaataa
Protein Sequence: MGLVSDHLKIHLKTHDNRKPFQCTLCNRGYGTAAALTSHMQNHKRSNEISTQPTPVGSIKCHKCSETFREPEELQNHMNMHQSPENVHNTNSKSSKNTYAAILICPYCRKDNFSTMDALQSHVQSAHKSIFNGDLQREISNLKLKSPAPAASQLNSSSPLNVTQSFNSLPSYYCDQCTMNFSSLQALQKHTIAVHGFSNITYNNLKYLMSSPEVYNNGKLYCMYCAMQFLTPAAYAEHYIIFHSPYHPQLIGLTPPEQMKPTDLSKKTSPVKRSNVDEQRSSPRKKNKTNENSISNCSNHRYGYPGPFLCNQCSAAFTDFESFRAHIKLHIEETSGGLLGGASPMERKRTSAEFTCPHCRSTFSSNEEISQHIVTHFLSSGVKYSCENCQKSFEKADDLQKHLMEVHVHHLYSCSICNEVFDSKMTIQSHFTVRHSNEAKVYRCTGCSSSSSIAFHSELEFANHVKTMHASSSPLLAPFATHHNAQMQRCFICHMSFPTELEMQLHLATHGKQFQCTLCPQSFHIEYLLDKHMQNDHSSPQINGSYENCPDSGNKESSPILSPNNRFDSQIKKNDNSEPKSNFICCDICEKCDFSSENELLSHKKLLHHKLLSPVKHESSENAEDRLKLSQKHKSNSSSSSPTIRCENKKMESFNGDSNGNSLTCCEICEKRDFACEAELLSHKKLIHNIKLSPHGKVSLNCAYCKENCKSRSDLENHMKTHSQNSTSSGKHKCIICDEMCPTAAVLAEHKLTHCKVLSGKTCMHCKGSITTEEQFFSHIQQHSSSQNGTTNNNNSSQNSLVLPTFCVICRQTLSSEMEARMHARFHLHQSADLVPCSVCFHMSERQDLIAGICKECYQRHGKSSPFRCPECHMKFDNGTAIEIHLATVHRKSYQCIKCQVSFDNEKEIQHHVASHVMIDGLNGHECRLCRLVLPSPVQLQTHLIEHTFAGCATFTCYLCSSVFTTAQGLQTHILEHGLAARPYDCSRCKQKFFFTSELEHHSFVHLEELALSEGHGYFYGQDKNLLKDKSAANIPYINHSISLAENLYNNNKEPSNKYHCTDCGTDFFHANDLYDHKNRFHNSAQTERYVQNGEHKRPKRETPNPTDGNRVKYEEQNDNVDVDEKIDTKQAECESDDEQIDVVTTKIEEPTENAEKNDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01150697;
90% Identity: iTF_01150697;
80% Identity: -