Tman003668.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- -
- Assembly
- GCA_900080175.1
- Location
- FKYK01009939.1:61-1632[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-12 4.8e-08 32.7 18.2 4 229 21 237 19 267 0.54 2 2 8.3e-08 0.0015 17.9 0.1 338 381 276 320 250 323 0.86
Sequence Information
- Coding Sequence
- ATGAAAGGCGGTGGTTATTCGATGAAGACAGTTGCGGATTTGAGTACAAAATCTAGTGTCGATCGTGAACGTTTGAGAGAACGTGAAAGAGAAGCTCGAGCCCAAATGACTTTCGAAGCGGATCAGCGAACGTCACAAGATGTTATCAATTCGGCGCCGCTGTTCGGAGAAATAGTTCGCGTAAATCCGAAATCGAACGACAAGGAAAGACAGCAAATCGAACGTAAACTGGGCCGATTCGAAGACGTGAAACATCTATTAGCCGATCAAGACGTCACAAATCTTTTCGGCGTAGACGGCCAACCTCCGCCCAGTCCTGCTCCAAATATTTCTTCgggttcgtcgtcgtcgtcgtcgtccgcCGGtcacgaatttaaaaaaccaaacgcCTGCCTTCAATCTCACCAGACGAAATCTtctcatcatcatcaccatcaccaccatcatcatcattcCGGCGGCGCTCAAAGAAACGCGTTTGCTAAACCTAGCGACGGAAAATTAGGATACGCGAATCGCGGCGCTAATTCGTACGCGACTACGTCAACAAAACACGTAAACGCGACTACGAACCAAGCGTCAACGTTGTCGACCAAAGCCAGCGCCCTTTCAGCAAACAATTCATCGCTAGGTAGCGGTATGGGCGGTGCCAGCGGAAATAGTAGCTCAAGCTCAAACATAAACattaacaacaacaacaattacCACTACGGCTTAATGTCGAACAAGACTCACGATTACGCCGTTAGAATTCAACAATCGGCAGCCAagaatttgccaaaaatcaaTTGTGAGCTACGGGATTCTTTGAGAGGTACGAGTTTTGCGGACGATAATACGTCGGTTTCTTCAACCAacgtggaaaatattttagacGAAATGACGTCGGGGGTCCGTACGCCGTTGACAGCGATCGCAGCTACGCCGCGAAAAGAAGTCGAGTCCAAATTCACTTTCAATCCGATTTCCGGAAaggtttga
- Protein Sequence
- MKGGGYSMKTVADLSTKSSVDRERLREREREARAQMTFEADQRTSQDVINSAPLFGEIVRVNPKSNDKERQQIERKLGRFEDVKHLLADQDVTNLFGVDGQPPPSPAPNISSGSSSSSSSAGHEFKKPNACLQSHQTKSSHHHHHHHHHHHSGGAQRNAFAKPSDGKLGYANRGANSYATTSTKHVNATTNQASTLSTKASALSANNSSLGSGMGGASGNSSSSSNININNNNNYHYGLMSNKTHDYAVRIQQSAAKNLPKINCELRDSLRGTSFADDNTSVSSTNVENILDEMTSGVRTPLTAIAATPRKEVESKFTFNPISGKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -