Tman015757.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- SMARCC2
- Assembly
- GCA_900080175.1
- Location
- FKYK01036497.1:2194-3871[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-15 1.3e-12 47.7 0.2 3 44 45 86 43 88 0.95 2 3 2.2 2.2e+03 -1.1 0.0 23 40 147 165 145 165 0.91 3 3 6.2 6.3e+03 -2.6 0.1 8 18 330 340 328 341 0.84
Sequence Information
- Coding Sequence
- atgaatgaatttacCTGCATAGTTGTTTTAGgagttttcagtttatttttgtggCACGCAGTCGTAGTGTGTACAATGTACGGTAAACGCGCCggcttattgaaaaataaaaccgcCGCCGGTCTTACCAGAGATTGGACGGAGCAAGAAACGTTGCTGCTGTTGGAAGCTCTTGAACTGTACAAAGACGATTGGAACAAAGTATGCGAACACGTGGGTACTCGCACCCAAGACGAATGCATTTTACATTTCCTGAGATTACCCATCGAAGATCCGTACCTGGAAGATTTCGAAAGCGGAGGCGCTCTCGGACCGCTCGCTTATCAGCCTATTCCATTCAGCAAAGCTGGTAATCCGATCATGTCGACTGTCGCGTTTCTCGCATCTGTCGTCGATCCAAGAATAGCGTCGACCGCCGCCAAGGCTGCTATGGAAGCGTTCGCCGAAATTAAGGACGAGGTACCCGCTTCGTTGATGGATTCGCACATTAGAAACGTAGAGGCTTCCATGGTCGATGGTAAATTCGATCCGACAGCCGGTTTACTGCAGAGCGGCATCGCCGGTACAGAGAAGGAAGACGACGCAACGGCGACCGCAGTTGCTTCcgacaaatcgaaaaaagaaactagcTCGACTACGGAAACGATGACCAAAGATAGCggcagcaacagcagcaacgTTACGGATAACGTTTCGCTCGAATCTGAAAAATGTGCAACCGAATCGGGAGAAGGCGCTGGCGGCAACACGGCCGAAGGCAAAGACGCATCTTCGGACAAGTCGACGATCGTCGCCAATTACGACGAATCATCGTCGAACGTGGACGCGCCTAAAAAGGAAGCGGCCACCGAAAGAACAACCGACGAATCCGTCGAATCCAAAGACGATAACGAACGTACCAAACTAATTAAAGACGCGCAACTGCAGTCTGCAGCCGCGGCCGCTTTAGCCGCTGCCGCCGTGAAAGCGAAACATCTGGCGGCGGTCGAAGAACGTAAAATTAAGTCGCTGGTCGCGTTGCTCGTCGAAacgcagatgaaaaaattggaaattaagcTGCGTCATTTCGAAGAGTTGGAAACTACGATGGAAAAAGAACGCGAAGGATTGGAATATCAACGTCAACAACTCATCACCGAACGTCAGCAGTTCCATTTGGAGCAGATTAAAGCGGCCGAATTCCGCGCTCGTCAACAAGCGCAACAACGCAACGCTGCCgaacaacagcagcagcagcagcaacaacaacagcaacaacagcagcagcagcagcagcagcaacaacaactaCAACAGCAGCAGTAG
- Protein Sequence
- MNEFTCIVVLGVFSLFLWHAVVVCTMYGKRAGLLKNKTAAGLTRDWTEQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFESGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRIASTAAKAAMEAFAEIKDEVPASLMDSHIRNVEASMVDGKFDPTAGLLQSGIAGTEKEDDATATAVASDKSKKETSSTTETMTKDSGSNSSNVTDNVSLESEKCATESGEGAGGNTAEGKDASSDKSTIVANYDESSSNVDAPKKEAATERTTDESVESKDDNERTKLIKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQIKAAEFRARQQAQQRNAAEQQQQQQQQQQQQQQQQQQQQQQLQQQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262395;
- 90% Identity
- -
- 80% Identity
- -