Plon005927.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_900064475.1
- Location
- FIZU01059076.1:1-3058[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-15 1.4e-12 47.9 0.2 3 44 19 60 17 62 0.95 2 3 1.6 2.1e+03 -0.7 0.0 23 40 121 139 119 140 0.91 3 3 5.4 7.1e+03 -2.4 0.1 8 18 292 302 290 303 0.84
Sequence Information
- Coding Sequence
- TATGGTAAACGTGCCggtttattgaaaaacaaaacagcCGCTGGGCTCACAAGAGATTGGACCGAACAAGAAACGTTGCTGTTGTTGGAAGCATTGGAATTATACAAAGATGATTGGAATAAAGTATGTGAACACGTGGGTACTCGTACGCAAGACGAATGTATTTTACATTTCTTGAGATTACCCATCGAAGATCCTTACTTGGAAGATTTCGAAACTGgcGGTGCTCTCGGTCCATTGGCCTATCAGCCAATTCCATTCAGTAAAGCTGGTAATCCGATAATGTCGACGGTTGCTTTCTTGGCATCTGTTGTCGATCCTAGAATCGCCTCCACCGCTGCTAAAGCCGCCATGGAAGCGTTTGCCGAAATCAAAGACGAGGTACCAGCTTCCTTGATGGATTCGCACATTAGAAATGTTGAAGCTTCCATGGTAGATGGTAAATTCGATCCGACAGCCGGCTTATTGCAGAGCGGCATTGCTGGTACTGAAAAAGAAGACGAAACATCAGCCGGAGCGGATAAATCGAAAAAGGAACCAGGTTCGGGTACGGAATCAGCCACCAAAGAAAGCGGCACTGCTGGTAGCGCTTCGCCCGAGTCCGAAAAATCAGCTACAGAAGCGGCCGGAGCCGGTACCGAAGGCAAAGATTCCTCTGCCGAGAAACCAGGCGCGATTACGAACGAGGATGAATCATCATCCGGCGCAGACGCCCCTAAAAAAGAAGCGACCTCCGAACGAACATCCGAAGAAACCGCCGAATCGAAAGAAGAGAGCGAACGTGCTAAACTAGTCAAGGACGCCCAACTACAATCTGCAGCCGCTGCCGCTCTAGCCGCGGCTGCTGTCAAAGCCAAACATCTAGCGGCTGTCGAAGAACGTAAGATCAAATCACTGGTAGCCTTGCTCGTCGAAACGCAAATGAAGAAATTGGAAATCAAGCTGCGTCATTTCGAAGAATTAGAAACGACAATGGAAAAGGAAAGAGAAGGATTGGAGTATCAACGTCAGCAACTGATCACCGAACGTCAACAATTTCATCTGGAGCAGATTAAAGCGGCAGAATTTCATAAtttgttggtatttttattgtattttcatttcgatttcgaCGCTGGTAATGCGCGCGAATGTGTAAAAAGTGTAATGACCCAATGA
- Protein Sequence
- YGKRAGLLKNKTAAGLTRDWTEQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFETGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRIASTAAKAAMEAFAEIKDEVPASLMDSHIRNVEASMVDGKFDPTAGLLQSGIAGTEKEDETSAGADKSKKEPGSGTESATKESGTAGSASPESEKSATEAAGAGTEGKDSSAEKPGAITNEDESSSGADAPKKEATSERTSEETAESKEESERAKLVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQIKAAEFHNLLVFLLYFHFDFDAGNARECVKSVMTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01472400;
- 90% Identity
- -
- 80% Identity
- -