Trut034687.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Toxorhynchites rutilus
Gene Symbol
Hr39
Assembly
GCA_029784135.1
Location
CM056649.1:40245291-40267090[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.23 6.6e+03 -2.2 2.5 133 161 24 52 8 103 0.68
2 4 1 3e+04 -4.3 5.1 89 131 242 273 159 334 0.49
3 4 3.7e-11 1.1e-06 30.1 0.1 1 151 434 591 434 595 0.65
4 4 4e-66 1.2e-61 211.1 0.1 202 380 590 763 579 767 0.97

Sequence Information

Coding Sequence
ATGACATCAACGGAGTCGCGAGGTAACGTATCGGTGACAACGATCAATTGCGAAAATGATCCTAACTTCAGTCCGGCCAACGTTAGCACTATAATCCCAAGCTCTGGGAGCAGCAGTAGTAGCAATAGCAGCAGTAACACTCCGAACACAAGTGCCAACAGTAGCAGTGGCACGATTTTCGGGAATGTGGGTATCAGAATTACCGTGCCAAAAATGGAAGAATCTGACGAGTCTGATACAGAACTATCGAACATTGAAAAGACAGCTAAAGTTAACATGCGGGAGGATAGCCACGCCAGTAAAGCGCTGCCCCGGCCAATGTCCTGGGAGGGGGAACTGTCTGAGCCTGAGGCGATGATGATTGACAACGAAAACAGCTCGAGTTGCACTGGCCCAGCTTCGATAGTCGGTAAGACAGAACCACTCGTGGTAACCAAGGAAGAACCTTCCGGACCAGGAATAACCGAGCCATTGGCACTTACTGCGAATAACAGTAGTAGCAGCTCACCCATCCCATCCAGGGCTATCAAGCCGGAAGTTGGCATTTCGTTGATAAACCACACCGTAACTTCCAGTTACTCAAATTCCATTCCAACTAATAGTAGTACTATTAACGTTAAGAAACTCCCGGACGTCATCAATTTGAAGTACGAACATGGCCTTGCGGATAATCTCTCAGCCGTACACTCGCCGCTTCTGGTTCGTTCAAAAACCACACTTCTTCCGGCTAATCCAAGTCCGGATTCTGCCATCCACTCCGTTTACACTCACAGTTCGCCGAGTCAATCCCCGCTCACGTCCCGGCATGCTCCCTACACCCCTTCGCTCAGTCGTAACAACAGCGACGCCTCCCACAGCAGCTGCTATTCGTATAGCTCCGAATTTAGCCCAACGCATTCACCGATCCAGGGACGGCACAATATGTTCGCCGGTGGATCCTACAACGGATCCCCGCTACATCACTCAGTATTATACAAACCGATGATCGACACGGAACAAAGTCTCAAACTTGCCGGCCAGGAGGAGCCTGTCTTCGACAGCGAACATCTGCCGTCCCCGGGTATCTCCCGGCAGCAATTGATCAACAGCCCATGCCCCATTTGCGGGGATAAAATCTCCGGATTCCATTATGGCATTTTCTCGTGCGAATCGTGCAAGGGCTTTTTCAAGCGGACCGTACAGAACAGGAAGAATTATGTGTGCCTTAGGGGAGCCGCCTGTCCGGTGACGATCGCGACCCGGAAAAAGTGCCCCGCGTGTCGGTTTGAGAAGTGCCTTCAGAAGggaatgaagttggaagCCATCCGCGAGGACCGAACTCGTGGCGGTCGGTCGACGTATCAGTGTTCGTACACGCTGCCCGGTACGATCCTGAGTCCGTCATTGTCCAACAATGACAATAGCAGTGGTGGCAGTGGCAACAATTATCCGTACTCGAATGCGCACCGTGGCCAGTTCCAGCCGGGAGGGCCCAATGGTaacggtggtggtggtggtggtttcGTTGGAGGCCAACAGATGAAAATCGAATCAAACCAAGACAACAGCAGTTCGAACAGTAGCGGGCCGGTAAACGAGGGTAACATGAACTGCAATCATCACGGGCGATCGGGTGGCGTTCCACAATTGCTCCAGGAAATCATGGATGTCGAGCATCTGTGGCAATACAATGCGGCCGAGCTGGCACGACTGAATCAGCCTCCGCCGCCGGTAAGCAGTAGTGCAGCAGCCATCTCGGTCAATCCGTTGCTGACGAGTGCGGGGATTTCGAGTGACAGCAGCCCGGATCTGATTGCCAATCTGTGTAACATCGCGGACCATCGGCTGTACAAGATTGTCAAGTGGTGCAAGAGCTTGCCGctgtttaaaaatatttcgattgacGATCAAATTAGCCTGCTAATCAACTCGTGGTGTGAGCTGCTGCTTTTCTCGTGTTGTTTCCGGTCAATGTCGACTCCGGGCGAAATTAAGATCTCCCTCGGAAAATCCATAACACTGGAGCAGGCCCGGCATAGCGGATTGCAGCCATGCATCGAACGTATGCTCAATCTAACCGATCACCTCCGGCGGCTTCGGGTGGATCGCTACGAATACGTTGCCATGAAGGTGATTGTGCTGCTCTCGTCGGACACGTCCGACCTAAAGGAGTCGGAAAAGGTTCGAGCCAGCCAGGAAAAAGCCCTACAGGCGCTCCAAGCGTACACTCTGGCTTACTACCCTGAAACTCCGGCCAAGTTTGGAGAGTTGCTGCTGCGAATTCCCGAACTTCAGCGAACTTGTCAGCACCGTAATCCCGTCTGGTCCTGGAGATTTAAGTGGGCTTTAAGGAATCCACTACCCATTCAACCCTTGACTTCGTGA
Protein Sequence
MTSTESRGNVSVTTINCENDPNFSPANVSTIIPSSGSSSSSNSSSNTPNTSANSSSGTIFGNVGIRITVPKMEESDESDTELSNIEKTAKVNMREDSHASKALPRPMSWEGELSEPEAMMIDNENSSSCTGPASIVGKTEPLVVTKEEPSGPGITEPLALTANNSSSSSPIPSRAIKPEVGISLINHTVTSSYSNSIPTNSSTINVKKLPDVINLKYEHGLADNLSAVHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNMFAGGSYNGSPLHHSVLYKPMIDTEQSLKLAGQEEPVFDSEHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGTILSPSLSNNDNSSGGSGNNYPYSNAHRGQFQPGGPNGNGGGGGGFVGGQQMKIESNQDNSSSNSSGPVNEGNMNCNHHGRSGGVPQLLQEIMDVEHLWQYNAAELARLNQPPPPVSSSAAAISVNPLLTSAGISSDSSPDLIANLCNIADHRLYKIVKWCKSLPLFKNISIDDQISLLINSWCELLLFSCCFRSMSTPGEIKISLGKSITLEQARHSGLQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLSSDTSDLKESEKVRASQEKALQALQAYTLAYYPETPAKFGELLLRIPELQRTCQHRNPVWSWRFKWALRNPLPIQPLTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00400673;
90% Identity
iTF_01471573;
80% Identity
iTF_01471573;